RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 H2AFXP16104 143 aaPredicted RBP18.23■□□□□ 0.51
GPN1-212ENST00000616939 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
GPN1-212ENST00000616939 AKAP4Q5JQC9 854 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 STK3Q13188 491 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
GPN1-212ENST00000616939 KAZALD1Q96I82 304 aa18.23■□□□□ 0.51
GPN1-212ENST00000616939 HMGB1P09429 215 aaKnown RBP18.22■□□□□ 0.51
GPN1-212ENST00000616939 MLECQ14165 292 aa18.22■□□□□ 0.51
GPN1-212ENST00000616939 BMS1Q14692 1282 aaKnown RBP18.22■□□□□ 0.51
GPN1-212ENST00000616939 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
GPN1-212ENST00000616939 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
GPN1-212ENST00000616939 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
GPN1-212ENST00000616939 ATP5JP18859 108 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 ELF2Q15723 593 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 Q6ZUG5 572 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 NSUN7Q8NE18 718 aaKnown RBP18.21■□□□□ 0.51
GPN1-212ENST00000616939 IP6K1Q92551 441 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
GPN1-212ENST00000616939 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 COL15A1P39059 1388 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 IGSF3O75054 1194 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 LTKP29376 864 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 TEFQ10587 303 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 CCDC93Q567U6 631 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 LGR6Q9HBX8 967 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 USP16Q9Y5T5 823 aa18.21■□□□□ 0.51
GPN1-212ENST00000616939 A0A1W2PQ27 194 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 A0A1W2PQ64 194 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 A0A1W2PQD8 194 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 CCP110O43303 1012 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 KCNQ3O43525 872 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
GPN1-212ENST00000616939 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
GPN1-212ENST00000616939 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
GPN1-212ENST00000616939 AMOTL2Q9Y2J4 779 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 ZNF609O15014 1411 aa18.2■□□□□ 0.5
GPN1-212ENST00000616939 SCRN1Q12765 414 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 NBPF11Q86T75 865 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 NRDCO43847 1150 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 ANXA1P04083 346 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
GPN1-212ENST00000616939 FAM69CQ0P6D2 419 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
GPN1-212ENST00000616939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.19■□□□□ 0.5
GPN1-212ENST00000616939 FILIP1Q7Z7B0 1213 aa18.18■□□□□ 0.5
GPN1-212ENST00000616939 FSIP1Q8NA03 581 aa18.18■□□□□ 0.5
GPN1-212ENST00000616939 SH3TC1Q8TE82 1336 aa18.18■□□□□ 0.5
GPN1-212ENST00000616939 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
GPN1-212ENST00000616939 AFDNP55196 1824 aaKnown RBP18.17■□□□□ 0.5
GPN1-212ENST00000616939 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
GPN1-212ENST00000616939 AMOTQ4VCS5 1084 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
GPN1-212ENST00000616939 E4F1Q66K89 784 aaPredicted RBP18.17■□□□□ 0.5
GPN1-212ENST00000616939 PHLPP2Q6ZVD8 1323 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 FMR1NBQ8N0W7 255 aaPredicted RBP18.17■□□□□ 0.5
GPN1-212ENST00000616939 MRPS27Q92552 414 aaKnown RBP18.17■□□□□ 0.5
GPN1-212ENST00000616939 PPP1R13BQ96KQ4 1090 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 USP28Q96RU2 1077 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 ZNF446Q9NWS9 450 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 C5P01031 1676 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 SLIT3O75094 1523 aa18.17■□□□□ 0.5
GPN1-212ENST00000616939 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
GPN1-212ENST00000616939 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
GPN1-212ENST00000616939 TIGD1Q96MW7 591 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 RTEL1Q9NZ71 1219 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 PALLDQ8WX93 1383 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 PTPDC1A2A3K4 754 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 CYP21A2P08686 494 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 MCMDC2Q4G0Z9 681 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 ZNF530Q6P9A1 599 aaPredicted RBP18.16■□□□□ 0.5
GPN1-212ENST00000616939 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
GPN1-212ENST00000616939 RGS22Q8NE09 1264 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
GPN1-212ENST00000616939 SRRTQ9BXP5 876 aaKnown RBP18.16■□□□□ 0.5
GPN1-212ENST00000616939 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
GPN1-212ENST00000616939 TRMT1Q9NXH9 659 aaKnown RBP18.16■□□□□ 0.5
GPN1-212ENST00000616939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.16■□□□□ 0.5
GPN1-212ENST00000616939 ATP8B1O43520 1251 aa18.15■□□□□ 0.5
GPN1-212ENST00000616939 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
GPN1-212ENST00000616939 TPM4P67936 248 aa18.15■□□□□ 0.5
GPN1-212ENST00000616939 PROSER3Q2NL68 480 aa18.15■□□□□ 0.5
GPN1-212ENST00000616939 ADALQ6DHV7 355 aa18.15■□□□□ 0.5
GPN1-212ENST00000616939 PXDNQ92626 1479 aa18.15■□□□□ 0.5
GPN1-212ENST00000616939 EXOSC10Q01780 885 aaKnown RBP18.14■□□□□ 0.5
GPN1-212ENST00000616939 FBXL16Q8N461 479 aa18.14■□□□□ 0.5
GPN1-212ENST00000616939 EID1Q9Y6B2 187 aa18.14■□□□□ 0.5
GPN1-212ENST00000616939 CYP2C19P33261 490 aa18.14■□□□□ 0.49
GPN1-212ENST00000616939 SLC20A2Q08357 652 aa18.14■□□□□ 0.49
GPN1-212ENST00000616939 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms