RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 R3HCC1Q9Y3T6 440 aaKnown RBP7.1□□□□□ -1.27
RFC3-203ENST00000616236 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
RFC3-203ENST00000616236 A0A1W2PP55 124 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 FBXO24O75426 580 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
RFC3-203ENST00000616236 TATP17735 454 aaPredicted RBP7.09□□□□□ -1.27
RFC3-203ENST00000616236 GRNP28799 593 aaKnown RBP7.09□□□□□ -1.27
RFC3-203ENST00000616236 FAM160A1Q05DH4 1040 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
RFC3-203ENST00000616236 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 CERS3Q8IU89 383 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 PMEPA1Q969W9 287 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 ZFAND3Q9H8U3 227 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 KANSL2Q9H9L4 492 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.09□□□□□ -1.27
RFC3-203ENST00000616236 LATS2Q9NRM7 1088 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 ABI2Q9NYB9 513 aaPredicted RBP7.09□□□□□ -1.27
RFC3-203ENST00000616236 PRKAG3Q9UGI9 489 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 TRAK1Q9UPV9 953 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
RFC3-203ENST00000616236 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
RFC3-203ENST00000616236 XYLBO75191 536 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 CES1P23141 567 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 GPC1P35052 558 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 LRRC69Q6ZNQ3 347 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 LRP10Q7Z4F1 713 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 DHX37Q8IY37 1157 aaKnown RBP7.08□□□□□ -1.28
RFC3-203ENST00000616236 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 SH3TC2Q8TF17 1288 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 KLF16Q9BXK1 252 aaPredicted RBP7.08□□□□□ -1.28
RFC3-203ENST00000616236 FANCLQ9NW38 375 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 UBP1Q9NZI7 540 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 TLR6Q9Y2C9 796 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
RFC3-203ENST00000616236 WASF2Q9Y6W5 498 aa7.08□□□□□ -1.28
RFC3-203ENST00000616236 GREM1O60565 184 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 CDC45O75419 566 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 PARNO95453 639 aaKnown RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 RLBP1P12271 317 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 GARTP22102 1010 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 VEGFBP49765 207 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 PCNX4Q63HM2 1172 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 RPUSD2Q8IZ73 545 aaKnown RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 EMID1Q96A84 441 aaPredicted RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 RHOVQ96L33 236 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 ZIC5Q96T25 663 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 OXCT2Q9BYC2 517 aaPredicted RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 SLKQ9H2G2 1235 aaPredicted RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 KCNQ5Q9NR82 932 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 AKAP2Q9Y2D5 859 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 PRKAB1Q9Y478 270 aa7.07□□□□□ -1.28
RFC3-203ENST00000616236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
RFC3-203ENST00000616236 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
RFC3-203ENST00000616236 PF4P02776 101 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
RFC3-203ENST00000616236 ATP4AP20648 1035 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 RNF144AP50876 292 aaPredicted RBP7.06□□□□□ -1.28
RFC3-203ENST00000616236 WDR4P57081 412 aaKnown RBP7.06□□□□□ -1.28
RFC3-203ENST00000616236 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
RFC3-203ENST00000616236 SV2BQ7L1I2 683 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 LILRB2Q8N423 598 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 DNAJC7Q99615 494 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 PPM1HQ9ULR3 514 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 SUGT1Q9Y2Z0 365 aa7.06□□□□□ -1.28
RFC3-203ENST00000616236 TMEM238LA0A1B0GVL6 79 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 ESYT3A0FGR9 886 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 SPATA31C2B4DYI2 1134 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 EPB42P16452 691 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 LIG3P49916 1009 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 APOBRQ0VD83 1088 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 PLEKHG6Q3KR16 790 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 SNAP47Q5SQN1 464 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 PEAR1Q5VY43 1037 aaPredicted RBP7.05□□□□□ -1.28
RFC3-203ENST00000616236 PRPF40BQ6NWY9 871 aaKnown RBP7.05□□□□□ -1.28
RFC3-203ENST00000616236 DTHD1Q6ZMT9 781 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 CCDC81Q6ZN84 652 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 ANKRD24Q8TF21 1146 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 APPBP2Q92624 585 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 NKD1Q969G9 470 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 INSM2Q96T92 566 aaPredicted RBP7.05□□□□□ -1.28
RFC3-203ENST00000616236 CCDC113Q9H0I3 377 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 KANSL3Q9P2N6 904 aa7.05□□□□□ -1.28
RFC3-203ENST00000616236 ITGBL1O95965 494 aaPredicted RBP7.04□□□□□ -1.28
RFC3-203ENST00000616236 EGFRP00533 1210 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 EDN3P14138 238 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 CRKP46108 304 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 TYRO3Q06418 890 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 POU4F2Q12837 409 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 ARSJQ5FYB0 599 aaPredicted RBP7.04□□□□□ -1.28
RFC3-203ENST00000616236 TPTE2Q6XPS3 522 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 CELF2-AS1Q8N7Q2 184 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 SHDQ96IW2 340 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 CEP63Q96MT8 703 aa7.04□□□□□ -1.28
RFC3-203ENST00000616236 LIN7BQ9HAP6 207 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms