RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CCZ1P86791 482 aaPredicted RBP15.37■□□□□ 0.05
MSH6-214ENST00000616033 SETD1BQ9UPS6 1966 aaKnown RBP15.37■□□□□ 0.05
MSH6-214ENST00000616033 KCNA6P17658 529 aa15.37■□□□□ 0.05
MSH6-214ENST00000616033 PDILTQ8N807 584 aa15.37■□□□□ 0.05
MSH6-214ENST00000616033 CFAP45Q9UL16 551 aa15.37■□□□□ 0.05
MSH6-214ENST00000616033 BMS1Q14692 1282 aaKnown RBP15.36■□□□□ 0.05
MSH6-214ENST00000616033 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
MSH6-214ENST00000616033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.36■□□□□ 0.05
MSH6-214ENST00000616033 ZNF526Q8TF50 670 aaPredicted RBP15.36■□□□□ 0.05
MSH6-214ENST00000616033 GJB4Q9NTQ9 266 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 AATKQ6ZMQ8 1374 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 TTC21AQ8NDW8 1320 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 TEX35Q5T0J7 233 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 TMCO3Q6UWJ1 677 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 CARD6Q9BX69 1037 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 CALCOCO1Q9P1Z2 691 aa15.36■□□□□ 0.05
MSH6-214ENST00000616033 MYL6BP14649 208 aa15.35■□□□□ 0.05
MSH6-214ENST00000616033 POLA2Q14181 598 aa15.35■□□□□ 0.05
MSH6-214ENST00000616033 DPCR1Q3MIW9 517 aa15.35■□□□□ 0.05
MSH6-214ENST00000616033 THEMISQ8N1K5 641 aaPredicted RBP15.35■□□□□ 0.05
MSH6-214ENST00000616033 AOX1Q06278 1338 aa15.35■□□□□ 0.05
MSH6-214ENST00000616033 ANO10Q9NW15 660 aa15.35■□□□□ 0.05
MSH6-214ENST00000616033 ANKRD1Q15327 319 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 BEND3Q5T5X7 828 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 ST5P78524 1137 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 PPP1R13BQ96KQ4 1090 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
MSH6-214ENST00000616033 ELP1O95163 1332 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 SCRN1Q12765 414 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 E4F1Q66K89 784 aaPredicted RBP15.34■□□□□ 0.05
MSH6-214ENST00000616033 DHX40Q8IX18 779 aaKnown RBP15.34■□□□□ 0.05
MSH6-214ENST00000616033 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
MSH6-214ENST00000616033 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
MSH6-214ENST00000616033 RIMS1Q86UR5 1692 aaKnown RBP15.34■□□□□ 0.05
MSH6-214ENST00000616033 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.05
MSH6-214ENST00000616033 NRDCO43847 1150 aa15.33■□□□□ 0.05
MSH6-214ENST00000616033 RESTQ13127 1097 aa15.33■□□□□ 0.05
MSH6-214ENST00000616033 STK38Q15208 465 aa15.33■□□□□ 0.05
MSH6-214ENST00000616033 NYAP1Q6ZVC0 841 aa15.33■□□□□ 0.05
MSH6-214ENST00000616033 HDAC5Q9UQL6 1122 aa15.33■□□□□ 0.05
MSH6-214ENST00000616033 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 PNMA6AP0CW24 399 aaPredicted RBP15.33■□□□□ 0.04
MSH6-214ENST00000616033 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 KRBA2Q6ZNG9 492 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 NEUROD6Q96NK8 337 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 TTC41PQ6P2S7 1318 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 SASH1O94885 1247 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 SERPINC1P01008 464 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 ANKRD26Q9UPS8 1709 aa15.33■□□□□ 0.04
MSH6-214ENST00000616033 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 MARCKSP29966 332 aaPredicted RBP15.32■□□□□ 0.04
MSH6-214ENST00000616033 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 CDC42BPGQ6DT37 1551 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 PTPDC1A2A3K4 754 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 TRIM66O15016 1216 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 MRFAP1L1Q96HT8 127 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 SUCLG2Q96I99 432 aa15.32■□□□□ 0.04
MSH6-214ENST00000616033 SYCP1Q15431 976 aa15.31■□□□□ 0.04
MSH6-214ENST00000616033 ARMCX5Q6P1M9 558 aa15.31■□□□□ 0.04
MSH6-214ENST00000616033 NAT10Q9H0A0 1025 aaKnown RBP15.31■□□□□ 0.04
MSH6-214ENST00000616033 GPHNQ9NQX3 736 aaPredicted RBP15.31■□□□□ 0.04
MSH6-214ENST00000616033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.31■□□□□ 0.043e-7■■■□□ 17.8
MSH6-214ENST00000616033 HAND2P61296 217 aa15.31■□□□□ 0.04
MSH6-214ENST00000616033 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
MSH6-214ENST00000616033 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
MSH6-214ENST00000616033 ANKRD65E5RJM6 399 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 LMAN1P49257 510 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 NDUFA8P51970 172 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 RIC3Q7Z5B4 369 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 NEMFO60524 1076 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
MSH6-214ENST00000616033 CYP21A2P08686 494 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 GTF2A1P52655 376 aaPredicted RBP15.29■□□□□ 0.04
MSH6-214ENST00000616033 EVCP57679 992 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 TEX2Q8IWB9 1127 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 LRRC59Q96AG4 307 aaKnown RBP15.29■□□□□ 0.04
MSH6-214ENST00000616033 ERBB3P21860 1342 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 OAS2P29728 719 aaKnown RBP15.29■□□□□ 0.04
MSH6-214ENST00000616033 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 NBPF11Q86T75 865 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 SMARCE1Q969G3 411 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 AGLP35573 1532 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
MSH6-214ENST00000616033 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
MSH6-214ENST00000616033 TAF5LO75529 589 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 GNG11P61952 73 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 PHACTR2O75167 634 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 MCM6Q14566 821 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
MSH6-214ENST00000616033 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms