RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
RABGAP1-213ENST00000616002 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
RABGAP1-213ENST00000616002 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
RABGAP1-213ENST00000616002 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
RABGAP1-213ENST00000616002 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 RIPK4P57078 832 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 JDP2Q8WYK2 163 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 TRIM44Q96DX7 344 aaPredicted RBP13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 FZD9O00144 591 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 GPC2Q8N158 579 aa13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
RABGAP1-213ENST00000616002 APBB1O00213 710 aa13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 HLFQ16534 295 aa13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 DEFB115Q30KQ5 88 aa13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 MAP1SQ66K74 1059 aaPredicted RBP13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 NAP1L5Q96NT1 182 aaPredicted RBP13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 WBP1LQ9NX94 342 aa13.53□□□□□ -0.24
RABGAP1-213ENST00000616002 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 LBX1P52954 281 aa13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 NUCB2P80303 420 aa13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 PSMD1Q99460 953 aa13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 NYXQ9GZU5 481 aa13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 ABT1Q9ULW3 272 aaKnown RBP13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 ABCC4O15439 1325 aa13.52□□□□□ -0.25
RABGAP1-213ENST00000616002 ADAMTSL1Q8N6G6 1762 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 CDC45O75419 566 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 LMOD1P29536 600 aaPredicted RBP13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 ZNF445P59923 1031 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 RABEP1Q15276 862 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
RABGAP1-213ENST00000616002 GNAI1P63096 354 aa13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 MAP2K1Q02750 393 aaPredicted RBP13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
RABGAP1-213ENST00000616002 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 TBC1D9Q6ZT07 1266 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 API5Q9BZZ5 524 aaKnown RBP13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 VAMP4O75379 141 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 DDX21Q9NR30 783 aaKnown RBP eCLIP13.49□□□□□ -0.25
RABGAP1-213ENST00000616002 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 ZSCAN30Q86W11 494 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 GAS2L3Q86XJ1 694 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 MAP3K15Q6ZN16 1313 aa13.48□□□□□ -0.25
RABGAP1-213ENST00000616002 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
RABGAP1-213ENST00000616002 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
RABGAP1-213ENST00000616002 HSPA8P11142 646 aaKnown RBP13.47□□□□□ -0.25
RABGAP1-213ENST00000616002 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
RABGAP1-213ENST00000616002 BAG4O95429 457 aaKnown RBP13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 GPTP24298 496 aa13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 MCM5P33992 734 aa13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 TMX4Q9H1E5 349 aaPredicted RBP13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 DCTPP1Q9H773 170 aa13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 NUP98P52948 1817 aa13.46□□□□□ -0.25
RABGAP1-213ENST00000616002 PPEF1O14829 653 aaPredicted RBP13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 RAD21O60216 631 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 OFD1O75665 1012 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 MYL6BP14649 208 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 EPS15P42566 896 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 ECE1P42892 770 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 SCNN1DP51172 638 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 GRM1Q13255 1194 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 ABHD8Q96I13 439 aa13.45□□□□□ -0.26
RABGAP1-213ENST00000616002 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms