RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 CHRM1P11229 460 aaPredicted RBP22.42■■□□□ 1.18
CDK11B-206ENST00000615951 CREB3L3Q68CJ9 461 aa22.42■■□□□ 1.18
CDK11B-206ENST00000615951 NLRP10Q86W26 655 aa22.42■■□□□ 1.18
CDK11B-206ENST00000615951 LIMCH1Q9UPQ0 1083 aa22.42■■□□□ 1.18
CDK11B-206ENST00000615951 RNF20Q5VTR2 975 aa22.41■■□□□ 1.18
CDK11B-206ENST00000615951 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
CDK11B-206ENST00000615951 TOM1O60784 492 aa22.41■■□□□ 1.18
CDK11B-206ENST00000615951 LRRC24Q50LG9 513 aa22.41■■□□□ 1.18
CDK11B-206ENST00000615951 SYTL4Q96C24 671 aaPredicted RBP22.41■■□□□ 1.18
CDK11B-206ENST00000615951 HMG20BQ9P0W2 317 aa22.41■■□□□ 1.18
CDK11B-206ENST00000615951 RPAP1Q9BWH6 1393 aaPredicted RBP22.4■■□□□ 1.18
CDK11B-206ENST00000615951 CASTP20810 708 aaKnown RBP22.4■■□□□ 1.18
CDK11B-206ENST00000615951 AK2P54819 239 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 HLFQ16534 295 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 TSGA10IPQ3SY00 556 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 KBTBD3Q8NAB2 608 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 CEP126Q9P2H0 1117 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 CYP46A1Q9Y6A2 500 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 NUP98P52948 1817 aa22.4■■□□□ 1.18
CDK11B-206ENST00000615951 PSMA5P28066 241 aa22.39■■□□□ 1.18
CDK11B-206ENST00000615951 PKP1Q13835 747 aa22.39■■□□□ 1.18
CDK11B-206ENST00000615951 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.18
CDK11B-206ENST00000615951 ZNF594Q96JF6 807 aaPredicted RBP22.39■■□□□ 1.18
CDK11B-206ENST00000615951 AKAP2Q9Y2D5 859 aa22.39■■□□□ 1.18
CDK11B-206ENST00000615951 SLC27A2O14975 620 aa22.39■■□□□ 1.17
CDK11B-206ENST00000615951 BRD1O95696 1058 aa22.39■■□□□ 1.17
CDK11B-206ENST00000615951 KCNJ4P48050 445 aa22.39■■□□□ 1.17
CDK11B-206ENST00000615951 CBX1P83916 185 aa22.39■■□□□ 1.17
CDK11B-206ENST00000615951 FAM89AQ96GI7 184 aa22.39■■□□□ 1.17
CDK11B-206ENST00000615951 ZSCAN31Q96LW9 406 aaPredicted RBP22.39■■□□□ 1.17
CDK11B-206ENST00000615951 JAKMIP1Q96N16 626 aaKnown RBP22.39■■□□□ 1.17
CDK11B-206ENST00000615951 TAF5LO75529 589 aa22.38■■□□□ 1.17
CDK11B-206ENST00000615951 DNTTIP2Q5QJE6 756 aaKnown RBP22.38■■□□□ 1.17
CDK11B-206ENST00000615951 EDC3Q96F86 508 aaKnown RBP22.38■■□□□ 1.17
CDK11B-206ENST00000615951 NEUROD6Q96NK8 337 aa22.38■■□□□ 1.17
CDK11B-206ENST00000615951 RUFY3Q7L099 469 aa22.38■■□□□ 1.17
CDK11B-206ENST00000615951 DNAJC2Q99543 621 aaKnown RBP22.38■■□□□ 1.17
CDK11B-206ENST00000615951 ALDH8A1Q9H2A2 487 aaPredicted RBP22.38■■□□□ 1.17
CDK11B-206ENST00000615951 PDRG1Q9NUG6 133 aa22.38■■□□□ 1.17
CDK11B-206ENST00000615951 SH3TC1Q8TE82 1336 aa22.38■■□□□ 1.17
CDK11B-206ENST00000615951 IFIT5Q13325 482 aaKnown RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 NOL8Q76FK4 1167 aaKnown RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 MYH3P11055 1940 aa22.37■■□□□ 1.17
CDK11B-206ENST00000615951 A0A1B0GUL7 405 aa22.37■■□□□ 1.17
CDK11B-206ENST00000615951 DZIP3Q86Y13 1208 aaKnown RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 MARCH10Q8NA82 808 aaPredicted RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 PUS3Q9BZE2 481 aaKnown RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 SH2B1Q9NRF2 756 aaPredicted RBP22.37■■□□□ 1.17
CDK11B-206ENST00000615951 TIMM10P62072 90 aa22.36■■□□□ 1.17
CDK11B-206ENST00000615951 ADCK5Q3MIX3 580 aa22.36■■□□□ 1.17
CDK11B-206ENST00000615951 MCMDC2Q4G0Z9 681 aa22.36■■□□□ 1.17
CDK11B-206ENST00000615951 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
CDK11B-206ENST00000615951 AK7Q96M32 723 aa22.36■■□□□ 1.17
CDK11B-206ENST00000615951 PAG1Q9NWQ8 432 aa22.36■■□□□ 1.17
CDK11B-206ENST00000615951 BRD2P25440 801 aaKnown RBP22.35■■□□□ 1.17
CDK11B-206ENST00000615951 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
CDK11B-206ENST00000615951 KLHL40Q2TBA0 621 aa22.35■■□□□ 1.17
CDK11B-206ENST00000615951 ZNF34Q8IZ26 560 aa22.35■■□□□ 1.17
CDK11B-206ENST00000615951 HELLSQ9NRZ9 838 aa22.35■■□□□ 1.17
CDK11B-206ENST00000615951 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.35■■□□□ 1.17
CDK11B-206ENST00000615951 ZNF831Q5JPB2 1677 aa22.35■■□□□ 1.17
CDK11B-206ENST00000615951 ABCC12Q96J65 1359 aa22.35■■□□□ 1.17
CDK11B-206ENST00000615951 CCDC87Q9NVE4 849 aa22.35■■□□□ 1.17
CDK11B-206ENST00000615951 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
CDK11B-206ENST00000615951 MCM5P33992 734 aa22.34■■□□□ 1.17
CDK11B-206ENST00000615951 CTSWP56202 376 aa22.34■■□□□ 1.17
CDK11B-206ENST00000615951 KRT32Q14532 448 aa22.34■■□□□ 1.17
CDK11B-206ENST00000615951 MCTP1Q6DN14 999 aa22.34■■□□□ 1.17
CDK11B-206ENST00000615951 TTLL11Q8NHH1 800 aa22.34■■□□□ 1.17
CDK11B-206ENST00000615951 GPTP24298 496 aa22.34■■□□□ 1.17
CDK11B-206ENST00000615951 INTS5Q6P9B9 1019 aaKnown RBP22.34■■□□□ 1.17
CDK11B-206ENST00000615951 NUTM2BA6NNL0 878 aaPredicted RBP22.33■■□□□ 1.17
CDK11B-206ENST00000615951 NUTM2EB1AL46 878 aaPredicted RBP22.33■■□□□ 1.17
CDK11B-206ENST00000615951 DDX46Q7L014 1031 aaKnown RBP22.33■■□□□ 1.17
CDK11B-206ENST00000615951 NUTM2AQ8IVF1 878 aaPredicted RBP22.33■■□□□ 1.17
CDK11B-206ENST00000615951 LMBRD1Q9NUN5 540 aa22.33■■□□□ 1.17
CDK11B-206ENST00000615951 CGNQ9P2M7 1197 aaKnown RBP22.33■■□□□ 1.17
CDK11B-206ENST00000615951 WDR33Q9C0J8 1336 aaKnown RBP22.33■■□□□ 1.16
CDK11B-206ENST00000615951 PDE8AO60658 829 aa22.33■■□□□ 1.16
CDK11B-206ENST00000615951 IFIT1P09914 478 aaKnown RBP22.33■■□□□ 1.16
CDK11B-206ENST00000615951 SMARCC1Q92922 1105 aaPredicted RBP22.33■■□□□ 1.16
CDK11B-206ENST00000615951 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
CDK11B-206ENST00000615951 IRS4O14654 1257 aaPredicted RBP22.32■■□□□ 1.16
CDK11B-206ENST00000615951 ZBTB22O15209 634 aa22.32■■□□□ 1.16
CDK11B-206ENST00000615951 ANKRD1Q15327 319 aa22.32■■□□□ 1.16
CDK11B-206ENST00000615951 TRMT112Q9UI30 125 aaKnown RBP22.32■■□□□ 1.16
CDK11B-206ENST00000615951 KAT6BQ8WYB5 2073 aa22.32■■□□□ 1.16
CDK11B-206ENST00000615951 ANKRD18BA2A2Z9 1011 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 GOLIM4O00461 696 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 CCDC158Q5M9N0 1113 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 ZKSCAN5Q9Y2L8 839 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 RIPOR2Q9Y4F9 1068 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 LRP5O75197 1615 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 LOC102724428A0A0B4J2F2 783 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 SIK1P57059 783 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 SLC20A2Q08357 652 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 LRRFIP1Q32MZ4 808 aaKnown RBP22.31■■□□□ 1.16
CDK11B-206ENST00000615951 ZMYM1Q5SVZ6 1142 aa22.31■■□□□ 1.16
CDK11B-206ENST00000615951 NDUFB9Q9Y6M9 179 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms