RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
COL4A1-205ENST00000615732 SP8Q8IXZ3 490 aa13.58□□□□□ -0.24
COL4A1-205ENST00000615732 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
COL4A1-205ENST00000615732 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
COL4A1-205ENST00000615732 DDX60Q8IY21 1712 aaKnown RBP13.58□□□□□ -0.24
COL4A1-205ENST00000615732 KIF16BQ96L93 1317 aa13.58□□□□□ -0.24
COL4A1-205ENST00000615732 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
COL4A1-205ENST00000615732 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 BBOX1O75936 387 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 MAP2K2P36507 400 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 HIRAP54198 1017 aaPredicted RBP13.57□□□□□ -0.24
COL4A1-205ENST00000615732 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 PLBD2Q8NHP8 589 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 TRPM4Q8TD43 1214 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 SSH1Q8WYL5 1049 aa13.57□□□□□ -0.24
COL4A1-205ENST00000615732 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
COL4A1-205ENST00000615732 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
COL4A1-205ENST00000615732 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
COL4A1-205ENST00000615732 CELF1Q92879 486 aaKnown RBP13.56□□□□□ -0.24
COL4A1-205ENST00000615732 ISCA1Q9BUE6 129 aa13.56□□□□□ -0.24
COL4A1-205ENST00000615732 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
COL4A1-205ENST00000615732 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
COL4A1-205ENST00000615732 PGAP2Q9UHJ9 254 aa13.56□□□□□ -0.24
COL4A1-205ENST00000615732 HOXB7P09629 217 aa13.55□□□□□ -0.24
COL4A1-205ENST00000615732 TWISTNBQ3B726 338 aaPredicted RBP13.55□□□□□ -0.24
COL4A1-205ENST00000615732 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
COL4A1-205ENST00000615732 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
COL4A1-205ENST00000615732 DBNDD1Q9H9R9 158 aa13.55□□□□□ -0.24
COL4A1-205ENST00000615732 COG6Q9Y2V7 657 aa13.55□□□□□ -0.24
COL4A1-205ENST00000615732 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
COL4A1-205ENST00000615732 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
COL4A1-205ENST00000615732 SLC34A2O95436 690 aa13.54□□□□□ -0.24
COL4A1-205ENST00000615732 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
COL4A1-205ENST00000615732 GPSM2P81274 684 aa13.54□□□□□ -0.24
COL4A1-205ENST00000615732 AAMPQ13685 434 aa13.54□□□□□ -0.24
COL4A1-205ENST00000615732 TNIP1Q15025 636 aa13.54□□□□□ -0.24
COL4A1-205ENST00000615732 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
COL4A1-205ENST00000615732 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
COL4A1-205ENST00000615732 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
COL4A1-205ENST00000615732 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
COL4A1-205ENST00000615732 IRS4O14654 1257 aaPredicted RBP13.53□□□□□ -0.24
COL4A1-205ENST00000615732 VAMP4O75379 141 aa13.53□□□□□ -0.24
COL4A1-205ENST00000615732 DLK2Q6UY11 383 aa13.53□□□□□ -0.24
COL4A1-205ENST00000615732 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
COL4A1-205ENST00000615732 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
COL4A1-205ENST00000615732 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
COL4A1-205ENST00000615732 PHAXQ9H814 394 aaKnown RBP13.53□□□□□ -0.24
COL4A1-205ENST00000615732 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
COL4A1-205ENST00000615732 NOB1Q9ULX3 412 aaKnown RBP13.53□□□□□ -0.24
COL4A1-205ENST00000615732 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
COL4A1-205ENST00000615732 PSMD14O00487 310 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 CA12O43570 354 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 RGS19P49795 217 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 WASHC4Q2M389 1173 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 TSPYL6Q8N831 410 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
COL4A1-205ENST00000615732 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.25
COL4A1-205ENST00000615732 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 MYD88Q99836 296 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 MCOLN1Q9GZU1 580 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 HYPKQ9NX55 129 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.25
COL4A1-205ENST00000615732 ECE2O60344 883 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 EGFRP00533 1210 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
COL4A1-205ENST00000615732 MVPQ14764 893 aaKnown RBP13.51□□□□□ -0.25
COL4A1-205ENST00000615732 SF3B3Q15393 1217 aaKnown RBP13.51□□□□□ -0.25
COL4A1-205ENST00000615732 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
COL4A1-205ENST00000615732 SAMD7Q7Z3H4 446 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 TMC4Q7Z404 712 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 USP48Q86UV5 1035 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 C8orf58Q8NAV2 365 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 KCNQ5Q9NR82 932 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
COL4A1-205ENST00000615732 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
COL4A1-205ENST00000615732 H7C1D1 291 aa13.5□□□□□ -0.25
COL4A1-205ENST00000615732 RLBP1P12271 317 aa13.5□□□□□ -0.25
COL4A1-205ENST00000615732 TRIM27P14373 513 aa13.5□□□□□ -0.25
COL4A1-205ENST00000615732 TBC1D10BQ4KMP7 808 aaPredicted RBP13.5□□□□□ -0.25
COL4A1-205ENST00000615732 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
COL4A1-205ENST00000615732 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
COL4A1-205ENST00000615732 TNRC18O15417 2968 aaPredicted RBP13.5□□□□□ -0.25
COL4A1-205ENST00000615732 UFL1O94874 794 aa13.49□□□□□ -0.25
COL4A1-205ENST00000615732 HUNKP57058 714 aa13.49□□□□□ -0.25
COL4A1-205ENST00000615732 NOGQ13253 232 aa13.49□□□□□ -0.25
COL4A1-205ENST00000615732 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
COL4A1-205ENST00000615732 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
COL4A1-205ENST00000615732 DPF2Q92785 391 aa13.49□□□□□ -0.25
COL4A1-205ENST00000615732 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
COL4A1-205ENST00000615732 ADM5C9JUS6 153 aa13.48□□□□□ -0.25
COL4A1-205ENST00000615732 DGKZQ13574 1117 aa13.48□□□□□ -0.25
COL4A1-205ENST00000615732 RBM26Q5T8P6 1007 aaKnown RBP13.48□□□□□ -0.25
COL4A1-205ENST00000615732 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
COL4A1-205ENST00000615732 API5Q9BZZ5 524 aaKnown RBP13.48□□□□□ -0.25
COL4A1-205ENST00000615732 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms