RNA–Protein interactions for RNA: ENST00000615695.1

DDB2-210, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-210ENST00000615695 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
DDB2-210ENST00000615695 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
DDB2-210ENST00000615695 COL4A5P29400 1685 aa13.17□□□□□ -0.3
DDB2-210ENST00000615695 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
DDB2-210ENST00000615695 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
DDB2-210ENST00000615695 TTLL11Q8NHH1 800 aa13.16□□□□□ -0.3
DDB2-210ENST00000615695 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
DDB2-210ENST00000615695 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
DDB2-210ENST00000615695 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
DDB2-210ENST00000615695 CTSWP56202 376 aa13.15□□□□□ -0.3
DDB2-210ENST00000615695 HDAC1Q13547 482 aaPredicted RBP13.15□□□□□ -0.3
DDB2-210ENST00000615695 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
DDB2-210ENST00000615695 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
DDB2-210ENST00000615695 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
DDB2-210ENST00000615695 RWDD1Q9H446 243 aaPredicted RBP13.15□□□□□ -0.3
DDB2-210ENST00000615695 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
DDB2-210ENST00000615695 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 HMMRO75330 724 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 POLA2Q14181 598 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 SOGA3Q5TF21 947 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
DDB2-210ENST00000615695 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
DDB2-210ENST00000615695 IGHDP01880 384 aa13.13□□□□□ -0.31
DDB2-210ENST00000615695 NPR1P16066 1061 aa13.13□□□□□ -0.31
DDB2-210ENST00000615695 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
DDB2-210ENST00000615695 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDB2-210ENST00000615695 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
DDB2-210ENST00000615695 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
DDB2-210ENST00000615695 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
DDB2-210ENST00000615695 GREM2Q9H772 168 aa13.12□□□□□ -0.31
DDB2-210ENST00000615695 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
DDB2-210ENST00000615695 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
DDB2-210ENST00000615695 DDX60Q8IY21 1712 aaKnown RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 RTL9Q8NET4 1388 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 ITGA6P23229 1130 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 RIC1Q4ADV7 1423 aa13.11□□□□□ -0.31
DDB2-210ENST00000615695 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
DDB2-210ENST00000615695 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
DDB2-210ENST00000615695 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
DDB2-210ENST00000615695 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
DDB2-210ENST00000615695 HOXA10P31260 410 aaPredicted RBP13.1□□□□□ -0.31
DDB2-210ENST00000615695 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
DDB2-210ENST00000615695 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
DDB2-210ENST00000615695 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
DDB2-210ENST00000615695 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
DDB2-210ENST00000615695 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
DDB2-210ENST00000615695 LRRC37AA6NMS7 1700 aa13.09□□□□□ -0.31
DDB2-210ENST00000615695 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
DDB2-210ENST00000615695 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
DDB2-210ENST00000615695 SEC31BQ9NQW1 1179 aa13.09□□□□□ -0.31
DDB2-210ENST00000615695 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
DDB2-210ENST00000615695 SMC5Q8IY18 1101 aa13.08□□□□□ -0.32
DDB2-210ENST00000615695 KLHDC4Q8TBB5 520 aa13.08□□□□□ -0.32
DDB2-210ENST00000615695 RPGRQ92834 1020 aaKnown RBP13.08□□□□□ -0.32
DDB2-210ENST00000615695 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
DDB2-210ENST00000615695 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
DDB2-210ENST00000615695 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
DDB2-210ENST00000615695 HACL1Q9UJ83 578 aa13.08□□□□□ -0.32
DDB2-210ENST00000615695 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
DDB2-210ENST00000615695 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
DDB2-210ENST00000615695 FOXN1O15353 648 aa13.07□□□□□ -0.32
DDB2-210ENST00000615695 RAB11FIP3O75154 756 aa13.07□□□□□ -0.32
DDB2-210ENST00000615695 EPHX2P34913 555 aa13.07□□□□□ -0.32
DDB2-210ENST00000615695 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
DDB2-210ENST00000615695 G3BP1Q13283 466 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDB2-210ENST00000615695 HSP90AB4PQ58FF6 505 aa13.07□□□□□ -0.32
DDB2-210ENST00000615695 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
DDB2-210ENST00000615695 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
DDB2-210ENST00000615695 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
DDB2-210ENST00000615695 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
DDB2-210ENST00000615695 EYA2O00167 538 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 BBOX1O75936 387 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 CIAO1O76071 339 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
DDB2-210ENST00000615695 GRAPQ13588 217 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 ANKRD18AQ8IVF6 992 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
DDB2-210ENST00000615695 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
DDB2-210ENST00000615695 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
DDB2-210ENST00000615695 CASP8AP2Q9UKL3 1982 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms