RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 GADD45BO75293 160 aaPredicted RBP16.41■□□□□ 0.22
SSBP2-220ENST00000615665 ZNF771Q7L3S4 317 aaPredicted RBP16.41■□□□□ 0.22
SSBP2-220ENST00000615665 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 DTNBO60941 627 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 DACT1Q9NYF0 836 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
SSBP2-220ENST00000615665 HELLSQ9NRZ9 838 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 ZKSCAN5Q9Y2L8 839 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
SSBP2-220ENST00000615665 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 KLF18A0A0U1RQI7 1052 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 G3V3G9 751 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 DCAF8Q5TAQ9 597 aa16.4■□□□□ 0.22
SSBP2-220ENST00000615665 RAB11FIP4Q86YS3 637 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 WASF1Q92558 559 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 ZNF165P49910 485 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 APOBRQ0VD83 1088 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
SSBP2-220ENST00000615665 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
SSBP2-220ENST00000615665 TPM1P09493 284 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 UQCRFS1P1P0C7P4 283 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 ME3Q16798 604 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
SSBP2-220ENST00000615665 PES1O00541 588 aaKnown RBP16.38■□□□□ 0.21
SSBP2-220ENST00000615665 SLC3A2P08195 630 aaKnown RBP16.38■□□□□ 0.21
SSBP2-220ENST00000615665 FILIP1Q7Z7B0 1213 aa16.38■□□□□ 0.21
SSBP2-220ENST00000615665 FAM89AQ96GI7 184 aa16.38■□□□□ 0.21
SSBP2-220ENST00000615665 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
SSBP2-220ENST00000615665 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
SSBP2-220ENST00000615665 ANKRD26Q9UPS8 1709 aa16.38■□□□□ 0.21
SSBP2-220ENST00000615665 FAM200AQ8TCP9 573 aa16.38■□□□□ 0.21
SSBP2-220ENST00000615665 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
SSBP2-220ENST00000615665 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 MTX1Q13505 466 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 ERVV-2B6SEH9 535 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 GOLGA8AA7E2F4 631 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
SSBP2-220ENST00000615665 POLR3DP05423 398 aaPredicted RBP16.37■□□□□ 0.21
SSBP2-220ENST00000615665 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
SSBP2-220ENST00000615665 CEP170BQ9Y4F5 1589 aaPredicted RBP16.36■□□□□ 0.21
SSBP2-220ENST00000615665 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 PRC1O43663 620 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 CAVIN2O95810 425 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 STX1AQ16623 288 aa16.36■□□□□ 0.21
SSBP2-220ENST00000615665 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 SERPINC1P01008 464 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
SSBP2-220ENST00000615665 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 IRS4O14654 1257 aaPredicted RBP16.35■□□□□ 0.21
SSBP2-220ENST00000615665 SASH1O94885 1247 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 TYRO3Q06418 890 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 TMEM67Q5HYA8 995 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 CCAR2Q8N163 923 aaKnown RBP16.35■□□□□ 0.21
SSBP2-220ENST00000615665 CLIP2Q9UDT6 1046 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
SSBP2-220ENST00000615665 ADCY9O60503 1353 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 ZNF830Q96NB3 372 aaPredicted RBP16.35■□□□□ 0.21
SSBP2-220ENST00000615665 TPCN1Q9ULQ1 816 aa16.35■□□□□ 0.21
SSBP2-220ENST00000615665 MARCH6O60337 910 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 CDC37L1Q7L3B6 337 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
SSBP2-220ENST00000615665 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
SSBP2-220ENST00000615665 PDILTQ8N807 584 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 SMTNL1A8MU46 457 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
SSBP2-220ENST00000615665 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 CCDC144CPQ8IYA2 1237 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 MTMR6Q9Y217 621 aa16.34■□□□□ 0.21
SSBP2-220ENST00000615665 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.21
SSBP2-220ENST00000615665 PPP1R9BQ96SB3 815 aa16.33■□□□□ 0.21
SSBP2-220ENST00000615665 BTG4Q9NY30 223 aa16.33■□□□□ 0.21
SSBP2-220ENST00000615665 XAGE2Q96GT9 111 aa16.33■□□□□ 0.2
SSBP2-220ENST00000615665 HAUS7Q99871 368 aa16.33■□□□□ 0.2
SSBP2-220ENST00000615665 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
SSBP2-220ENST00000615665 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.2
SSBP2-220ENST00000615665 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
SSBP2-220ENST00000615665 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
SSBP2-220ENST00000615665 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
SSBP2-220ENST00000615665 NOL7Q9UMY1 257 aaKnown RBP16.33■□□□□ 0.2
SSBP2-220ENST00000615665 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
SSBP2-220ENST00000615665 SSRP1Q08945 709 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms