RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 STAG2Q8N3U4 1231 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 MFSD14AQ96MC6 490 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 KCNF1Q9H3M0 494 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 PRM3Q9NNZ6 103 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 ATG3Q9NT62 314 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 TLR7Q9NYK1 1049 aaKnown RBP5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 BCS1LQ9Y276 419 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 HIF3AQ9Y2N7 669 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 PPME1Q9Y570 386 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 J3QW42 95 aa5.7□□□□□ -1.5
HMGB1P24-202ENST00000615653 F13BP05160 661 aa5.7□□□□□ -1.5
HMGB1P24-202ENST00000615653 COL26A1Q96A83 441 aa5.7□□□□□ -1.5
HMGB1P24-202ENST00000615653 ZBTB7BO15156 539 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 C21orf2O43822 256 aa5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 PPP1R12BO60237 982 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 SEMA3FQ13275 785 aa5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 CILP2Q8IUL8 1156 aa5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 C2orf49Q9BVC5 232 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 PAK6Q9NQU5 681 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 BSDC1Q9NW68 430 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P24-202ENST00000615653 M0R2N6 131 aa5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 GHRHP01286 108 aa5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 SOX11P35716 441 aa5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 BUD31P41223 144 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 OSBPL1AQ9BXW6 950 aa5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 TRIM33Q9UPN9 1127 aa5.68□□□□□ -1.5
HMGB1P24-202ENST00000615653 LINC01387J3KSC0 135 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 BIN1O00499 593 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 HOXD8P13378 290 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 PREPP48147 710 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 IDH3AP50213 366 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 NCOA4Q13772 614 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 RTN1Q16799 776 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 DUOXA2Q1HG44 320 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 FLCNQ8NFG4 579 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 TPCN2Q8NHX9 752 aa5.67□□□□□ -1.5
HMGB1P24-202ENST00000615653 SKIP12755 728 aa5.66□□□□□ -1.5
HMGB1P24-202ENST00000615653 MCM6Q14566 821 aa5.66□□□□□ -1.5
HMGB1P24-202ENST00000615653 TMEM132AQ24JP5 1023 aa5.66□□□□□ -1.5
HMGB1P24-202ENST00000615653 ANKRD34AQ69YU3 496 aa5.66□□□□□ -1.5
HMGB1P24-202ENST00000615653 RBSNQ9H1K0 784 aa5.66□□□□□ -1.5
HMGB1P24-202ENST00000615653 EGFRP00533 1210 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 ARSDP51689 593 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 WASHC4Q2M389 1173 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 CCDC102BQ68D86 513 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 FBXL6Q8N531 539 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 NFATC2IPQ8NCF5 419 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 BHLHE22Q8NFJ8 381 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 GAS2L2Q8NHY3 880 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 NGLY1Q96IV0 654 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 SLC38A3Q99624 504 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 METTL22Q9BUU2 404 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 KIAA1024Q9UPX6 916 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
HMGB1P24-202ENST00000615653 ATAD2Q6PL18 1390 aa5.65□□□□□ -1.51
HMGB1P24-202ENST00000615653 PSAPP07602 524 aa5.64□□□□□ -1.51
HMGB1P24-202ENST00000615653 MAP4P27816 1152 aaKnown RBP5.64□□□□□ -1.51
HMGB1P24-202ENST00000615653 SOX18P35713 384 aa5.64□□□□□ -1.51
HMGB1P24-202ENST00000615653 TRIM50Q86XT4 487 aa5.64□□□□□ -1.51
HMGB1P24-202ENST00000615653 KLHL23Q8NBE8 558 aa5.64□□□□□ -1.51
HMGB1P24-202ENST00000615653 FOXD4L4Q8WXT5 416 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P24-202ENST00000615653 CYP26A1O43174 497 aa5.63□□□□□ -1.51
HMGB1P24-202ENST00000615653 FLIIQ13045 1269 aa5.63□□□□□ -1.51
HMGB1P24-202ENST00000615653 TMEM40Q8WWA1 233 aa5.63□□□□□ -1.51
HMGB1P24-202ENST00000615653 NSUN5Q96P11 429 aaKnown RBP5.63□□□□□ -1.51
HMGB1P24-202ENST00000615653 RAPGEFL1Q9UHV5 662 aa5.63□□□□□ -1.51
HMGB1P24-202ENST00000615653 FSCN2O14926 492 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 DDX3YO15523 660 aaKnown RBP5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 ADAM11O75078 769 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 MESP2Q0VG99 397 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 TXNDC11Q6PKC3 985 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 C1QL4Q86Z23 238 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 SIAH1Q8IUQ4 282 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 UBASH3BQ8TF42 649 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 FAM84AQ96KN4 292 aa5.62□□□□□ -1.51
HMGB1P24-202ENST00000615653 MMP20O60882 483 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 CFPP27918 469 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 LCNL1Q6ZST4 164 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 TTLL10Q6ZVT0 673 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 ATG4DQ86TL0 474 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 WWC1Q8IX03 1113 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 SHISA5Q8N114 240 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 TSEN2Q8NCE0 465 aaKnown RBP5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 FAM168AQ92567 244 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 TOX2Q96NM4 488 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 CARD10Q9BWT7 1032 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 RNF208Q9H0X6 261 aa5.61□□□□□ -1.51
HMGB1P24-202ENST00000615653 CDC27P30260 824 aa5.6□□□□□ -1.51
HMGB1P24-202ENST00000615653 ATP1A2P50993 1020 aa5.6□□□□□ -1.51
HMGB1P24-202ENST00000615653 CLDN10P78369 228 aa5.6□□□□□ -1.51
HMGB1P24-202ENST00000615653 ZNF792Q3KQV3 632 aa5.6□□□□□ -1.51
HMGB1P24-202ENST00000615653 SGO2Q562F6 1265 aa5.6□□□□□ -1.51
HMGB1P24-202ENST00000615653 DEPDC4Q8N2C3 294 aa5.6□□□□□ -1.51
HMGB1P24-202ENST00000615653 USP17L5A8MUK1 530 aa5.59□□□□□ -1.51
HMGB1P24-202ENST00000615653 MICAL2O94851 1124 aa5.59□□□□□ -1.51
HMGB1P24-202ENST00000615653 SCG3Q8WXD2 468 aaKnown RBP5.59□□□□□ -1.51
HMGB1P24-202ENST00000615653 KLHDC7BQ96G42 594 aa5.59□□□□□ -1.51
HMGB1P24-202ENST00000615653 GDPD2Q9HCC8 539 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms