RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 LPIN3Q9BQK8 851 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 JPH1Q9HDC5 661 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 A6NHS1 94 aa9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 RGS9O75916 674 aaPredicted RBP9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 EIF2AK2P19525 551 aaKnown RBP9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 HYAL2Q12891 473 aa9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 COL9A3Q14050 684 aaPredicted RBP9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 ELMSAN1Q6PJG2 1045 aa9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 CITED4Q96RK1 184 aa9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 IVNS1ABPQ9Y6Y0 642 aa9.44□□□□□ -0.9
SCAMP1-205ENST00000614488 KIF4AO95239 1232 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 GHRHP01286 108 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 NID1P14543 1247 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 SNX29Q8TEQ0 813 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 NUDT8Q8WV74 236 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
SCAMP1-205ENST00000614488 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
SCAMP1-205ENST00000614488 HFE2Q6ZVN8 426 aa9.42□□□□□ -0.9
SCAMP1-205ENST00000614488 PMEPA1Q969W9 287 aa9.42□□□□□ -0.9
SCAMP1-205ENST00000614488 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
SCAMP1-205ENST00000614488 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 AFF1P51825 1210 aaKnown RBP9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 PDE3BQ13370 1112 aa9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 PLD4Q96BZ4 506 aa9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 FAM129BQ96TA1 746 aa9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 SMG9Q9H0W8 520 aaKnown RBP9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 CNTN3Q9P232 1028 aa9.41□□□□□ -0.9
SCAMP1-205ENST00000614488 J3QW42 95 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 GDF11O95390 407 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 COL8A1P27658 744 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 GRIK5Q16478 980 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 COL13A1Q5TAT6 717 aaPredicted RBP9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 PLVAPQ9BX97 442 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 CHRDQ9H2X0 955 aa9.4□□□□□ -0.9
SCAMP1-205ENST00000614488 PHACTR2O75167 634 aa9.39□□□□□ -0.91
SCAMP1-205ENST00000614488 CES1P23141 567 aa9.39□□□□□ -0.91
SCAMP1-205ENST00000614488 DCAF5Q96JK2 942 aa9.39□□□□□ -0.91
SCAMP1-205ENST00000614488 RBCK1Q9BYM8 510 aa9.39□□□□□ -0.91
SCAMP1-205ENST00000614488 BIN2Q9UBW5 565 aaPredicted RBP9.39□□□□□ -0.91
SCAMP1-205ENST00000614488 NCAPG2Q86XI2 1143 aa9.38□□□□□ -0.91
SCAMP1-205ENST00000614488 KANSL3Q9P2N6 904 aa9.38□□□□□ -0.91
SCAMP1-205ENST00000614488 SALL4Q9UJQ4 1053 aa9.38□□□□□ -0.91
SCAMP1-205ENST00000614488 ILDR2Q71H61 639 aa9.37□□□□□ -0.91
SCAMP1-205ENST00000614488 CACTIN-AS1Q8N1I8 211 aa9.37□□□□□ -0.91
SCAMP1-205ENST00000614488 CEP120Q8N960 986 aa9.37□□□□□ -0.91
SCAMP1-205ENST00000614488 FOXD3Q9UJU5 478 aaPredicted RBP9.37□□□□□ -0.91
SCAMP1-205ENST00000614488 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
SCAMP1-205ENST00000614488 NEFLP07196 543 aa9.36□□□□□ -0.91
SCAMP1-205ENST00000614488 SPATA31C1P0DKV0 1188 aa9.36□□□□□ -0.91
SCAMP1-205ENST00000614488 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
SCAMP1-205ENST00000614488 MSL1Q68DK7 614 aa9.36□□□□□ -0.91
SCAMP1-205ENST00000614488 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
SCAMP1-205ENST00000614488 SMNDC1O75940 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCAMP1-205ENST00000614488 IGHA2P01877 340 aa9.35□□□□□ -0.91
SCAMP1-205ENST00000614488 ATP11AP98196 1134 aa9.35□□□□□ -0.91
SCAMP1-205ENST00000614488 WFDC8Q8IUA0 241 aa9.35□□□□□ -0.91
SCAMP1-205ENST00000614488 AMOTL2Q9Y2J4 779 aa9.35□□□□□ -0.91
SCAMP1-205ENST00000614488 EREGO14944 169 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 EDN3P14138 238 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 AEBP1Q8IUX7 1158 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 DTWD1Q8N5C7 304 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 ALKBH8Q96BT7 664 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 PBX4Q9BYU1 374 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 RASSF4Q9H2L5 321 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 ZFYVE28Q9HCC9 887 aa9.34□□□□□ -0.91
SCAMP1-205ENST00000614488 GPR182O15218 404 aa9.33□□□□□ -0.92
SCAMP1-205ENST00000614488 RAC1P63000 192 aa9.33□□□□□ -0.92
SCAMP1-205ENST00000614488 TRIM28Q13263 835 aaKnown RBP9.33□□□□□ -0.92
SCAMP1-205ENST00000614488 A0A0A0MRY4 1105 aa9.32□□□□□ -0.92
SCAMP1-205ENST00000614488 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
SCAMP1-205ENST00000614488 TMC1Q8TDI8 760 aa9.32□□□□□ -0.92
SCAMP1-205ENST00000614488 DZANK1Q9NVP4 752 aa9.32□□□□□ -0.92
SCAMP1-205ENST00000614488 TRIM33Q9UPN9 1127 aa9.32□□□□□ -0.92
SCAMP1-205ENST00000614488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-205ENST00000614488 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 MAPK1P28482 360 aa9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 BAG6P46379 1132 aa9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 GDF6Q6KF10 455 aaPredicted RBP9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 DMRTC2Q8IXT2 367 aaPredicted RBP9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 MUC3BQ9H195 1237 aa9.31□□□□□ -0.92
SCAMP1-205ENST00000614488 ELNP15502 786 aa9.3□□□□□ -0.92
SCAMP1-205ENST00000614488 FMR1NBQ8N0W7 255 aaPredicted RBP9.3□□□□□ -0.92
SCAMP1-205ENST00000614488 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
SCAMP1-205ENST00000614488 SRA1Q9HD15 236 aaKnown RBP9.3□□□□□ -0.92
SCAMP1-205ENST00000614488 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 NFKBIEO00221 500 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 CPNE3O75131 537 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 ACPPP15309 386 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 PTPRAP18433 802 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 PLA2G4EQ3MJ16 856 aa9.29□□□□□ -0.92
SCAMP1-205ENST00000614488 SND1Q7KZF4 910 aaKnown RBP eCLIP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms