RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 SKAP1Q86WV1 359 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 SSH3Q8TE77 659 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 KAZALD1Q96I82 304 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 SIL1Q9H173 461 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 PA2G4Q9UQ80 394 aaKnown RBP10.37□□□□□ -0.75
PSMB3-208ENST00000613870 CDHR2Q9BYE9 1310 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 POTECB2RU33 542 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
PSMB3-208ENST00000613870 RAB11FIP3O75154 756 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 CTSWP56202 376 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 NUCB1Q02818 461 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
PSMB3-208ENST00000613870 MTX1Q13505 466 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 POLA2Q14181 598 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 LAMB2P55268 1798 aa10.36□□□□□ -0.75
PSMB3-208ENST00000613870 SNED1Q8TER0 1413 aa10.35□□□□□ -0.75
PSMB3-208ENST00000613870 ANKRD18BA2A2Z9 1011 aa10.35□□□□□ -0.75
PSMB3-208ENST00000613870 FKBP4Q02790 459 aaKnown RBP eCLIP10.35□□□□□ -0.75
PSMB3-208ENST00000613870 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
PSMB3-208ENST00000613870 ERC1Q8IUD2 1116 aa10.35□□□□□ -0.75
PSMB3-208ENST00000613870 KLHDC4Q8TBB5 520 aa10.35□□□□□ -0.75
PSMB3-208ENST00000613870 RBM46Q8TBY0 533 aaKnown RBP10.35□□□□□ -0.75
PSMB3-208ENST00000613870 RPGRQ92834 1020 aaKnown RBP10.35□□□□□ -0.75
PSMB3-208ENST00000613870 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
PSMB3-208ENST00000613870 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 RABL6Q3YEC7 729 aaPredicted RBP10.34□□□□□ -0.75
PSMB3-208ENST00000613870 CCDC152Q4G0S7 254 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 KIF1BPQ96EK5 621 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 RBM17Q96I25 401 aaKnown RBP10.34□□□□□ -0.75
PSMB3-208ENST00000613870 CRAMP1Q96RY5 1269 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 IL1RAPL2Q9NP60 686 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 ZNF277Q9NRM2 450 aaPredicted RBP10.34□□□□□ -0.75
PSMB3-208ENST00000613870 TAF1P21675 1872 aa10.34□□□□□ -0.75
PSMB3-208ENST00000613870 DDNO94850 711 aaPredicted RBP10.33□□□□□ -0.76
PSMB3-208ENST00000613870 VEGFAP15692 232 aaPredicted RBP10.33□□□□□ -0.76
PSMB3-208ENST00000613870 ITGA6P23229 1130 aa10.33□□□□□ -0.76
PSMB3-208ENST00000613870 C16orf71Q8IYS4 520 aaPredicted RBP10.33□□□□□ -0.76
PSMB3-208ENST00000613870 TTLL11Q8NHH1 800 aa10.33□□□□□ -0.76
PSMB3-208ENST00000613870 ZNF594Q96JF6 807 aaPredicted RBP10.33□□□□□ -0.76
PSMB3-208ENST00000613870 GREM2Q9H772 168 aa10.33□□□□□ -0.76
PSMB3-208ENST00000613870 CNNM1Q9NRU3 951 aa10.33□□□□□ -0.76
PSMB3-208ENST00000613870 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
PSMB3-208ENST00000613870 PCNTO95613 3336 aa10.32□□□□□ -0.76
PSMB3-208ENST00000613870 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
PSMB3-208ENST00000613870 CSF1RP07333 972 aa10.32□□□□□ -0.76
PSMB3-208ENST00000613870 IFIT2P09913 472 aaKnown RBP10.32□□□□□ -0.76
PSMB3-208ENST00000613870 CC2D2BQ6DHV5 1058 aa10.32□□□□□ -0.76
PSMB3-208ENST00000613870 CLASRPQ8N2M8 674 aaKnown RBP10.32□□□□□ -0.76
PSMB3-208ENST00000613870 RHPN1Q8TCX5 695 aa10.32□□□□□ -0.76
PSMB3-208ENST00000613870 PSMD1Q99460 953 aa10.32□□□□□ -0.76
PSMB3-208ENST00000613870 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
PSMB3-208ENST00000613870 NOP58Q9Y2X3 529 aaKnown RBP10.32□□□□□ -0.76
PSMB3-208ENST00000613870 EYA2O00167 538 aa10.31□□□□□ -0.76
PSMB3-208ENST00000613870 PDE4AP27815 886 aa10.31□□□□□ -0.76
PSMB3-208ENST00000613870 IGHMBP2P38935 993 aaKnown RBP10.31□□□□□ -0.76
PSMB3-208ENST00000613870 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
PSMB3-208ENST00000613870 RFX5P48382 616 aaPredicted RBP10.31□□□□□ -0.76
PSMB3-208ENST00000613870 PTPN12Q05209 780 aaKnown RBP10.31□□□□□ -0.76
PSMB3-208ENST00000613870 FSTL1Q12841 308 aa10.31□□□□□ -0.76
PSMB3-208ENST00000613870 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
PSMB3-208ENST00000613870 MPHOSPH8Q99549 860 aa10.31□□□□□ -0.76
PSMB3-208ENST00000613870 COL4A5P29400 1685 aa10.31□□□□□ -0.76
PSMB3-208ENST00000613870 FZD9O00144 591 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 IL15P40933 162 aaPredicted RBP10.3□□□□□ -0.76
PSMB3-208ENST00000613870 TFCP2Q12800 502 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 METTL24Q5JXM2 366 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 DDX46Q7L014 1031 aaKnown RBP10.3□□□□□ -0.76
PSMB3-208ENST00000613870 AACSQ86V21 672 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 CDC5LQ99459 802 aaKnown RBP10.3□□□□□ -0.76
PSMB3-208ENST00000613870 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 ATP6V0A2Q9Y487 856 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 SCN4AP35499 1836 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 ZNF541Q9H0D2 1346 aa10.3□□□□□ -0.76
PSMB3-208ENST00000613870 BBOX1O75936 387 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 POTEJP0CG39 1038 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 APLP1P51693 650 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 HTRA3P83110 453 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 LRRC24Q50LG9 513 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 GORABQ5T7V8 394 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 ANKRD18AQ8IVF6 992 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 SP8Q8IXZ3 490 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 DNAJC5GQ8N7S2 189 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 SMC1BQ8NDV3 1235 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 NEUROD6Q96NK8 337 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 PUS3Q9BZE2 481 aaKnown RBP10.29□□□□□ -0.76
PSMB3-208ENST00000613870 SEC31BQ9NQW1 1179 aa10.29□□□□□ -0.76
PSMB3-208ENST00000613870 COL4A1P02462 1669 aa10.28□□□□□ -0.76
PSMB3-208ENST00000613870 CIAO1O76071 339 aa10.28□□□□□ -0.76
PSMB3-208ENST00000613870 SASH1O94885 1247 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms