RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 PKN1Q16512 942 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 CPSF6Q16630 551 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC00649-216ENST00000613667 RTN1Q16799 776 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 MSMPQ1L6U9 139 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 KIAA1211Q6ZU35 1233 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 FAM20CQ8IXL6 584 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 NFATC2IPQ8NCF5 419 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 GAS2L2Q8NHY3 880 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 CHMP7Q8WUX9 453 aaPredicted RBP5.2□□□□□ -1.58
LINC00649-216ENST00000613667 ALG2Q9H553 416 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 TLR7Q9NYK1 1049 aaKnown RBP5.2□□□□□ -1.58
LINC00649-216ENST00000613667 KLK14Q9P0G3 267 aa5.2□□□□□ -1.58
LINC00649-216ENST00000613667 LOC102724428A0A0B4J2F2 783 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 SIK1P57059 783 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 NEUROD2Q15784 382 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 TXNDC11Q6PKC3 985 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 TRIM50Q86XT4 487 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 AGBL5Q8NDL9 886 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 SCG3Q8WXD2 468 aaKnown RBP5.19□□□□□ -1.58
LINC00649-216ENST00000613667 NSUN5Q96P11 429 aaKnown RBP5.19□□□□□ -1.58
LINC00649-216ENST00000613667 USP20Q9Y2K6 914 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 LEMD3Q9Y2U8 911 aa5.19□□□□□ -1.58
LINC00649-216ENST00000613667 FARP2O94887 1054 aaPredicted RBP5.18□□□□□ -1.58
LINC00649-216ENST00000613667 FOSL1P15407 271 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 RASA1P20936 1047 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 ADAMTSL4Q6UY14 1074 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 BEND4Q6ZU67 534 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 ATG3Q9NT62 314 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 HIF3AQ9Y2N7 669 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 NCANO14594 1321 aa5.18□□□□□ -1.58
LINC00649-216ENST00000613667 LINC01387J3KSC0 135 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 CD68P34810 354 aaPredicted RBP5.17□□□□□ -1.58
LINC00649-216ENST00000613667 ARSDP51689 593 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.17□□□□□ -1.58
LINC00649-216ENST00000613667 OGFOD1Q8N543 542 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 MFSD14AQ96MC6 490 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 RBSNQ9H1K0 784 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 KCNF1Q9H3M0 494 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 PPME1Q9Y570 386 aa5.17□□□□□ -1.58
LINC00649-216ENST00000613667 PRRG2O14669 202 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 MMP20O60882 483 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 GHRHP01286 108 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 BMP3P12645 472 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 PREPP48147 710 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 ATP1A2P50993 1020 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 SHISA5Q8N114 240 aa5.16□□□□□ -1.58
LINC00649-216ENST00000613667 FOXD4L4Q8WXT5 416 aaPredicted RBP5.16□□□□□ -1.58
LINC00649-216ENST00000613667 ZNF594Q96JF6 807 aaPredicted RBP5.16□□□□□ -1.58
LINC00649-216ENST00000613667 USP17L3A6NCW0 530 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 USP17L4A6NCW7 530 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 OPLAHO14841 1288 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 DDX3YO15523 660 aaKnown RBP5.15□□□□□ -1.59
LINC00649-216ENST00000613667 SART1O43290 800 aaKnown RBP5.15□□□□□ -1.59
LINC00649-216ENST00000613667 ADAM11O75078 769 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 LGR5O75473 907 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 PAPLNO95428 1278 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 ZNF865P0CJ78 1059 aaPredicted RBP5.15□□□□□ -1.59
LINC00649-216ENST00000613667 LILRA6Q6PI73 481 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 USP17L2Q6R6M4 530 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 USP17L1Q7RTZ2 530 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 SIX5Q8N196 739 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 LARGE2Q8N3Y3 721 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 UBASH3BQ8TF42 649 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 CARD10Q9BWT7 1032 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
LINC00649-216ENST00000613667 BIN1O00499 593 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 MICAL2O94851 1124 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 EGFRP00533 1210 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 F13BP05160 661 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 HOXD8P13378 290 aaPredicted RBP5.14□□□□□ -1.59
LINC00649-216ENST00000613667 DGKZQ13574 1117 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 KSR1Q8IVT5 923 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 PLEKHM2Q8IWE5 1019 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 OSBPL1AQ9BXW6 950 aa5.14□□□□□ -1.59
LINC00649-216ENST00000613667 BSDC1Q9NW68 430 aaPredicted RBP5.14□□□□□ -1.59
LINC00649-216ENST00000613667 RTCBQ9Y3I0 505 aaKnown RBP5.14□□□□□ -1.59
LINC00649-216ENST00000613667 PALM3A6NDB9 673 aaPredicted RBP5.13□□□□□ -1.59
LINC00649-216ENST00000613667 B8ZZF3 427 aa5.13□□□□□ -1.59
LINC00649-216ENST00000613667 PSAPP07602 524 aa5.13□□□□□ -1.59
LINC00649-216ENST00000613667 CDC25BP30305 580 aa5.13□□□□□ -1.59
LINC00649-216ENST00000613667 DUOXA2Q1HG44 320 aa5.13□□□□□ -1.59
LINC00649-216ENST00000613667 ANKRD34AQ69YU3 496 aa5.13□□□□□ -1.59
LINC00649-216ENST00000613667 LACRTQ9GZZ8 138 aa5.13□□□□□ -1.59
LINC00649-216ENST00000613667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.13□□□□□ -1.59
LINC00649-216ENST00000613667 XYLBO75191 536 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 SOX18P35713 384 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 ATP11AP98196 1134 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 KLHL23Q8NBE8 558 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 FLCNQ8NFG4 579 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 ADAMTS19Q8TE59 1207 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 SLC38A3Q99624 504 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 METTL22Q9BUU2 404 aaPredicted RBP5.12□□□□□ -1.59
LINC00649-216ENST00000613667 QTRT2Q9H974 415 aaKnown RBP5.12□□□□□ -1.59
LINC00649-216ENST00000613667 MKRN1Q9UHC7 482 aaKnown RBP5.12□□□□□ -1.59
LINC00649-216ENST00000613667 KCNMB2Q9Y691 235 aa5.12□□□□□ -1.59
LINC00649-216ENST00000613667 FSCN2O14926 492 aa5.11□□□□□ -1.59
LINC00649-216ENST00000613667 COL13A1Q5TAT6 717 aaPredicted RBP5.11□□□□□ -1.59
LINC00649-216ENST00000613667 FBXL6Q8N531 539 aa5.11□□□□□ -1.59
LINC00649-216ENST00000613667 UCN2Q96RP3 112 aa5.11□□□□□ -1.59
LINC00649-216ENST00000613667 PAK6Q9NQU5 681 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms