RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 FSD1Q9BTV5 496 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 LRRC2Q9BYS8 371 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 AGXT2Q9BYV1 514 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 CTNNA3Q9UI47 895 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 HIP1O00291 1037 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
PPARGC1A-217ENST00000613098 AIMP1Q12904 312 aaKnown RBP8.8□□□□□ -1
PPARGC1A-217ENST00000613098 SLC39A6Q13433 755 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 Q6ZUG5 572 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 NBPF11Q86T75 865 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 LRRC8AQ8IWT6 810 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 NSUN7Q8NE18 718 aaKnown RBP8.8□□□□□ -1
PPARGC1A-217ENST00000613098 COPRSQ9NQ92 184 aa8.8□□□□□ -1
PPARGC1A-217ENST00000613098 PALLDQ8WX93 1383 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 PDCP20941 246 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 CDC25BP30305 580 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 CCZ1BP86790 482 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 CCZ1P86791 482 aaPredicted RBP8.79□□□□□ -1
PPARGC1A-217ENST00000613098 EXOSC10Q01780 885 aaKnown RBP8.79□□□□□ -1
PPARGC1A-217ENST00000613098 TFCP2Q12800 502 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 ANKRD1Q15327 319 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 RABL6Q3YEC7 729 aaPredicted RBP8.79□□□□□ -1
PPARGC1A-217ENST00000613098 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
PPARGC1A-217ENST00000613098 GPATCH3Q96I76 525 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 HMG20BQ9P0W2 317 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 RCOR1Q9UKL0 485 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 GCP02774 474 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
PPARGC1A-217ENST00000613098 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -1
PPARGC1A-217ENST00000613098 TNNI3KQ59H18 835 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 NEK1Q96PY6 1258 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 FAM53CQ9NYF3 392 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 FPGT-TNNI3KV9GXZ4 949 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 RGPD5Q99666 1765 aa8.79□□□□□ -1
PPARGC1A-217ENST00000613098 FOXP2O15409 715 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 AMOTQ4VCS5 1084 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 ERCC4Q92889 916 aaPredicted RBP8.78□□□□□ -1
PPARGC1A-217ENST00000613098 PFKFB2O60825 505 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 FDPSP14324 419 aaKnown RBP8.78□□□□□ -1
PPARGC1A-217ENST00000613098 PIP4K2AP48426 406 aaPredicted RBP8.78□□□□□ -1
PPARGC1A-217ENST00000613098 SYCP1Q15431 976 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 USP28Q96RU2 1077 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 DBNDD2Q9BQY9 259 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 TRIM5Q9C035 493 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 TRPM3Q9HCF6 1732 aaPredicted RBP8.78□□□□□ -1
PPARGC1A-217ENST00000613098 SMTNL1A8MU46 457 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 TNNT1P13805 278 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 KCNJ4P48050 445 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 ZNF790Q6PG37 636 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 C14orf37Q86TY3 774 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 HAUS7Q99871 368 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 METTL22Q9BUU2 404 aaPredicted RBP8.78□□□□□ -1
PPARGC1A-217ENST00000613098 CLIP2Q9UDT6 1046 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 TMEM94Q12767 1356 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 NWD2Q9ULI1 1742 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 SCN11AQ9UI33 1791 aa8.78□□□□□ -1
PPARGC1A-217ENST00000613098 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 COPS6Q7L5N1 327 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 THEMISQ8N1K5 641 aaPredicted RBP8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 XAGE3Q8WTP9 111 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 RFX7Q2KHR2 1363 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 GOLGA6L6A8MZA4 724 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 ANKRD24Q8TF21 1146 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 MRFAP1L1Q96HT8 127 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 KCND1Q9NSA2 647 aa8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 DDX60Q8IY21 1712 aaKnown RBP8.77□□□□□ -1.01
PPARGC1A-217ENST00000613098 IGSF3O75054 1194 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 CEBPZQ03701 1054 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 ATG9AQ7Z3C6 839 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 ORAI2Q96SN7 254 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 MYD88Q99836 296 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 FANCGO15287 622 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 MYL6BP14649 208 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 KCNH5Q8NCM2 988 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 ZNF496Q96IT1 587 aaPredicted RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 HSD3B7Q9H2F3 369 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 NCOA5Q9HCD5 579 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 FOXO4P98177 505 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 APOBRQ0VD83 1088 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 MCMDC2Q4G0Z9 681 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 DDX46Q7L014 1031 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 CCAR1Q8IX12 1150 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 GTPBP4Q9BZE4 634 aaKnown RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 ZSCAN16Q9H4T2 348 aaPredicted RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 GPHNQ9NQX3 736 aaPredicted RBP8.76□□□□□ -1.01
PPARGC1A-217ENST00000613098 SH3TC1Q8TE82 1336 aa8.75□□□□□ -1.01
PPARGC1A-217ENST00000613098 KMT5BQ4FZB7 885 aa8.75□□□□□ -1.01
PPARGC1A-217ENST00000613098 NAA16Q6N069 864 aaPredicted RBP8.75□□□□□ -1.01
PPARGC1A-217ENST00000613098 BICD2Q8TD16 824 aa8.75□□□□□ -1.01
PPARGC1A-217ENST00000613098 CHMP4AQ9BY43 222 aa8.75□□□□□ -1.01
PPARGC1A-217ENST00000613098 PTPDC1A2A3K4 754 aa8.75□□□□□ -1.01
PPARGC1A-217ENST00000613098 C1orf141Q5JVX7 400 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms