RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ARHGAP45Q92619 1136 aa32.79■■■□□ 2.84
VEGFA-226ENST00000611736 KAZALD1Q96I82 304 aa32.79■■■□□ 2.84
VEGFA-226ENST00000611736 USP44Q9H0E7 712 aa32.79■■■□□ 2.84
VEGFA-226ENST00000611736 GGA1Q9UJY5 639 aa32.79■■■□□ 2.84
VEGFA-226ENST00000611736 RIMBP2O15034 1052 aa32.78■■■□□ 2.84
VEGFA-226ENST00000611736 VEGFAP15692 232 aaPredicted RBP32.78■■■□□ 2.84
VEGFA-226ENST00000611736 MPHOSPH8Q99549 860 aa32.78■■■□□ 2.84
VEGFA-226ENST00000611736 MINPP1Q9UNW1 487 aa32.78■■■□□ 2.84
VEGFA-226ENST00000611736 XDHP47989 1333 aa32.77■■■□□ 2.84
VEGFA-226ENST00000611736 IPO8O15397 1037 aaKnown RBP32.77■■■□□ 2.84
VEGFA-226ENST00000611736 EYA3Q99504 573 aa32.77■■■□□ 2.84
VEGFA-226ENST00000611736 POTECB2RU33 542 aa32.76■■■□□ 2.83
VEGFA-226ENST00000611736 CCDC57Q2TAC2 916 aa32.76■■■□□ 2.83
VEGFA-226ENST00000611736 BICC1Q9H694 974 aaKnown RBP32.76■■■□□ 2.83
VEGFA-226ENST00000611736 ZNRF3Q9ULT6 936 aa32.76■■■□□ 2.83
VEGFA-226ENST00000611736 GJA3Q9Y6H8 435 aa32.76■■■□□ 2.83
VEGFA-226ENST00000611736 TOMM70O94826 608 aa32.74■■■□□ 2.83
VEGFA-226ENST00000611736 TAF7LQ5H9L4 462 aa32.74■■■□□ 2.83
VEGFA-226ENST00000611736 GPC2Q8N158 579 aa32.74■■■□□ 2.83
VEGFA-226ENST00000611736 TNNQ9UQP3 1299 aa32.74■■■□□ 2.83
VEGFA-226ENST00000611736 TRIM27P14373 513 aa32.73■■■□□ 2.83
VEGFA-226ENST00000611736 ATF7IPQ6VMQ6 1270 aa32.73■■■□□ 2.83
VEGFA-226ENST00000611736 ZNF594Q96JF6 807 aaPredicted RBP32.73■■■□□ 2.83
VEGFA-226ENST00000611736 L3MBTL3Q96JM7 780 aaPredicted RBP32.73■■■□□ 2.83
VEGFA-226ENST00000611736 ATP2B4P23634 1241 aa32.72■■■□□ 2.83
VEGFA-226ENST00000611736 ANKRD44Q8N8A2 993 aa32.72■■■□□ 2.83
VEGFA-226ENST00000611736 DBNDD1Q9H9R9 158 aa32.72■■■□□ 2.83
VEGFA-226ENST00000611736 ZC3H12CQ9C0D7 883 aaKnown RBP32.71■■■□□ 2.83
VEGFA-226ENST00000611736 WTIPA6NIX2 430 aaPredicted RBP32.7■■■□□ 2.83
VEGFA-226ENST00000611736 CXCL9Q07325 125 aa32.7■■■□□ 2.83
VEGFA-226ENST00000611736 DOK7Q18PE1 504 aa32.7■■■□□ 2.83
VEGFA-226ENST00000611736 RABL6Q3YEC7 729 aaPredicted RBP32.7■■■□□ 2.83
VEGFA-226ENST00000611736 ZKSCAN2Q63HK3 967 aa32.7■■■□□ 2.83
VEGFA-226ENST00000611736 CLUAP1Q96AJ1 413 aa32.7■■■□□ 2.83
VEGFA-226ENST00000611736 YDJCA8MPS7 323 aa32.69■■■□□ 2.82
VEGFA-226ENST00000611736 RAD17O75943 681 aa32.69■■■□□ 2.82
VEGFA-226ENST00000611736 UBTFL1P0CB47 393 aaPredicted RBP32.69■■■□□ 2.82
VEGFA-226ENST00000611736 INTS3Q68E01 1043 aaKnown RBP32.69■■■□□ 2.82
VEGFA-226ENST00000611736 SCN4AP35499 1836 aa32.68■■■□□ 2.82
VEGFA-226ENST00000611736 IQCA1LA6NCM1 817 aa32.68■■■□□ 2.82
VEGFA-226ENST00000611736 HSPA6P17066 643 aa32.68■■■□□ 2.82
VEGFA-226ENST00000611736 CHRNDQ07001 517 aa32.68■■■□□ 2.82
VEGFA-226ENST00000611736 ANKRD2Q9GZV1 360 aa32.68■■■□□ 2.82
VEGFA-226ENST00000611736 ECE2O60344 883 aa32.67■■■□□ 2.82
VEGFA-226ENST00000611736 RBM46Q8TBY0 533 aaKnown RBP32.67■■■□□ 2.82
VEGFA-226ENST00000611736 G3V3G9 751 aa32.66■■■□□ 2.82
VEGFA-226ENST00000611736 DCAF8Q5TAQ9 597 aa32.66■■■□□ 2.82
VEGFA-226ENST00000611736 CIAPIN1Q6FI81 312 aa32.66■■■□□ 2.82
VEGFA-226ENST00000611736 LDHAL6AQ6ZMR3 332 aa32.66■■■□□ 2.82
VEGFA-226ENST00000611736 MEIS3Q99687 375 aa32.66■■■□□ 2.82
VEGFA-226ENST00000611736 CNNM1Q9NRU3 951 aa32.66■■■□□ 2.82
VEGFA-226ENST00000611736 HELBQ8NG08 1087 aaPredicted RBP32.65■■■□□ 2.82
VEGFA-226ENST00000611736 HACL1Q9UJ83 578 aa32.65■■■□□ 2.82
VEGFA-226ENST00000611736 LEMD3Q9Y2U8 911 aa32.65■■■□□ 2.82
VEGFA-226ENST00000611736 TAF1DQ9H5J8 278 aaPredicted RBP32.64■■■□□ 2.82
VEGFA-226ENST00000611736 ZNF804BA4D1E1 1349 aa32.63■■■□□ 2.81
VEGFA-226ENST00000611736 KCNJ4P48050 445 aa32.63■■■□□ 2.81
VEGFA-226ENST00000611736 TNIP1Q15025 636 aa32.63■■■□□ 2.81
VEGFA-226ENST00000611736 A0A1B0GUL6 1792 aa32.63■■■□□ 2.81
VEGFA-226ENST00000611736 MED23Q9ULK4 1368 aa32.62■■■□□ 2.81
VEGFA-226ENST00000611736 TAF5LO75529 589 aa32.62■■■□□ 2.81
VEGFA-226ENST00000611736 LMOD1P29536 600 aaPredicted RBP32.62■■■□□ 2.81
VEGFA-226ENST00000611736 SCNN1DP51172 638 aa32.62■■■□□ 2.81
VEGFA-226ENST00000611736 KCNQ5Q9NR82 932 aa32.62■■■□□ 2.81
VEGFA-226ENST00000611736 LRRFIP2Q9Y608 721 aaKnown RBP32.62■■■□□ 2.81
VEGFA-226ENST00000611736 PUS3Q9BZE2 481 aaKnown RBP32.61■■■□□ 2.81
VEGFA-226ENST00000611736 SCN9AQ15858 1988 aa32.61■■■□□ 2.81
VEGFA-226ENST00000611736 PLIN1O60240 522 aa32.6■■■□□ 2.81
VEGFA-226ENST00000611736 EPHX2P34913 555 aa32.6■■■□□ 2.81
VEGFA-226ENST00000611736 GMPSP49915 693 aaPredicted RBP32.6■■■□□ 2.81
VEGFA-226ENST00000611736 FTSJ3Q8IY81 847 aaKnown RBP32.6■■■□□ 2.81
VEGFA-226ENST00000611736 TMEM57Q8N5G2 664 aa32.6■■■□□ 2.81
VEGFA-226ENST00000611736 SNAP23O00161 211 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 PSMD14O00487 310 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 POTEIP0CG38 1075 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 POTEJP0CG39 1038 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 KLRK1P26718 216 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 EAPPQ56P03 285 aaPredicted RBP32.59■■■□□ 2.81
VEGFA-226ENST00000611736 SMC1BQ8NDV3 1235 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 KLHDC4Q8TBB5 520 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 HDAC5Q9UQL6 1122 aa32.59■■■□□ 2.81
VEGFA-226ENST00000611736 EPS15P42566 896 aa32.58■■■□□ 2.81
VEGFA-226ENST00000611736 GNAI3P08754 354 aa32.57■■■□□ 2.8
VEGFA-226ENST00000611736 FSTL1Q12841 308 aa32.57■■■□□ 2.8
VEGFA-226ENST00000611736 TXNRD3Q86VQ6 643 aa32.57■■■□□ 2.8
VEGFA-226ENST00000611736 YTHDC1Q96MU7 727 aaKnown RBP32.57■■■□□ 2.8
VEGFA-226ENST00000611736 DZIP1LQ8IYY4 767 aaKnown RBP32.56■■■□□ 2.8
VEGFA-226ENST00000611736 GPRC5DQ9NZD1 345 aa32.56■■■□□ 2.8
VEGFA-226ENST00000611736 LRRC24Q50LG9 513 aa32.55■■■□□ 2.8
VEGFA-226ENST00000611736 ZBTB12Q9Y330 459 aaPredicted RBP32.55■■■□□ 2.8
VEGFA-226ENST00000611736 RIPOR2Q9Y4F9 1068 aa32.55■■■□□ 2.8
VEGFA-226ENST00000611736 RLBP1P12271 317 aa32.54■■■□□ 2.8
VEGFA-226ENST00000611736 RCAN3Q9UKA8 241 aa32.54■■■□□ 2.8
VEGFA-226ENST00000611736 RFX5P48382 616 aaPredicted RBP32.53■■■□□ 2.8
VEGFA-226ENST00000611736 LDHDQ86WU2 507 aa32.53■■■□□ 2.8
VEGFA-226ENST00000611736 MROH5Q6ZUA9 1318 aa32.52■■■□□ 2.8
VEGFA-226ENST00000611736 APLP1P51693 650 aa32.52■■■□□ 2.8
VEGFA-226ENST00000611736 PODNQ7Z5L7 613 aa32.52■■■□□ 2.8
VEGFA-226ENST00000611736 PNMA8AQ86V59 439 aaPredicted RBP32.52■■■□□ 2.8
VEGFA-226ENST00000611736 COA1Q9GZY4 146 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms