RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
RTN1-209ENST00000611068 PRPF40AO75400 957 aaKnown RBP19.03■□□□□ 0.64
RTN1-209ENST00000611068 GABPB1Q06547 395 aaPredicted RBP19.03■□□□□ 0.64
RTN1-209ENST00000611068 GJD4Q96KN9 370 aaPredicted RBP19.03■□□□□ 0.64
RTN1-209ENST00000611068 TTC12Q9H892 705 aaPredicted RBP19.03■□□□□ 0.64
RTN1-209ENST00000611068 NDUFB9Q9Y6M9 179 aa19.03■□□□□ 0.64
RTN1-209ENST00000611068 RIOK3O14730 519 aaKnown RBP19.03■□□□□ 0.64
RTN1-209ENST00000611068 RFX5P48382 616 aaPredicted RBP19.03■□□□□ 0.64
RTN1-209ENST00000611068 PI4K2BQ8TCG2 481 aa19.03■□□□□ 0.64
RTN1-209ENST00000611068 TRERF1Q96PN7 1200 aa19.03■□□□□ 0.64
RTN1-209ENST00000611068 FEZ1Q99689 392 aa19.03■□□□□ 0.64
RTN1-209ENST00000611068 ISCA1Q9BUE6 129 aa19.02■□□□□ 0.64
RTN1-209ENST00000611068 AK9Q5TCS8 1911 aa19.02■□□□□ 0.63
RTN1-209ENST00000611068 TULP2O00295 520 aa19.02■□□□□ 0.63
RTN1-209ENST00000611068 BRD2P25440 801 aaKnown RBP19.02■□□□□ 0.63
RTN1-209ENST00000611068 GIGYF2Q6Y7W6 1299 aaKnown RBP19.02■□□□□ 0.63
RTN1-209ENST00000611068 CCDC87Q9NVE4 849 aa19.02■□□□□ 0.63
RTN1-209ENST00000611068 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
RTN1-209ENST00000611068 PUS3Q9BZE2 481 aaKnown RBP19.01■□□□□ 0.63
RTN1-209ENST00000611068 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
RTN1-209ENST00000611068 LRRC24Q50LG9 513 aa19.01■□□□□ 0.63
RTN1-209ENST00000611068 IL25Q9H293 177 aa19.01■□□□□ 0.63
RTN1-209ENST00000611068 CCDC66A2RUB6 948 aa19■□□□□ 0.63
RTN1-209ENST00000611068 ERICH4A6NGS2 130 aa19■□□□□ 0.63
RTN1-209ENST00000611068 CASC1Q6TDU7 716 aa19■□□□□ 0.63
RTN1-209ENST00000611068 BOLA2Q9H3K6 86 aa19■□□□□ 0.63
RTN1-209ENST00000611068 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
RTN1-209ENST00000611068 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
RTN1-209ENST00000611068 RABL6Q3YEC7 729 aaPredicted RBP18.99■□□□□ 0.63
RTN1-209ENST00000611068 NLRP10Q86W26 655 aa18.99■□□□□ 0.63
RTN1-209ENST00000611068 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
RTN1-209ENST00000611068 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
RTN1-209ENST00000611068 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
RTN1-209ENST00000611068 SEPT12Q8IYM1 358 aa18.99■□□□□ 0.63
RTN1-209ENST00000611068 EDC3Q96F86 508 aaKnown RBP18.99■□□□□ 0.63
RTN1-209ENST00000611068 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
RTN1-209ENST00000611068 IL6STP40189 918 aaPredicted RBP18.98■□□□□ 0.63
RTN1-209ENST00000611068 TERF2Q15554 542 aa18.98■□□□□ 0.63
RTN1-209ENST00000611068 NEUROD6Q96NK8 337 aa18.98■□□□□ 0.63
RTN1-209ENST00000611068 CHMLP26374 656 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 EIF5P55010 431 aaKnown RBP18.97■□□□□ 0.63
RTN1-209ENST00000611068 TIMM10P62072 90 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 BICDL1Q6ZP65 573 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 UBN2Q6ZU65 1347 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 NUP188Q5SRE5 1749 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 HCLS1P14317 486 aaPredicted RBP18.97■□□□□ 0.63
RTN1-209ENST00000611068 USP26Q9BXU7 913 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 COPRSQ9NQ92 184 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 ECHDC1Q9NTX5 307 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 SPTLC3Q9NUV7 552 aa18.97■□□□□ 0.63
RTN1-209ENST00000611068 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
RTN1-209ENST00000611068 ZBTB38Q8NAP3 1195 aaPredicted RBP18.96■□□□□ 0.63
RTN1-209ENST00000611068 ANO2Q9NQ90 1003 aa18.96■□□□□ 0.63
RTN1-209ENST00000611068 ERC2O15083 957 aa18.95■□□□□ 0.62
RTN1-209ENST00000611068 CTIFO43310 598 aaKnown RBP18.95■□□□□ 0.62
RTN1-209ENST00000611068 NCBP1Q09161 790 aaKnown RBP18.95■□□□□ 0.62
RTN1-209ENST00000611068 CCDC57Q2TAC2 916 aa18.95■□□□□ 0.62
RTN1-209ENST00000611068 DBNDD2Q9BQY9 259 aa18.95■□□□□ 0.62
RTN1-209ENST00000611068 DBNLQ9UJU6 430 aaKnown RBP18.95■□□□□ 0.62
RTN1-209ENST00000611068 IRS4O14654 1257 aaPredicted RBP18.94■□□□□ 0.62
RTN1-209ENST00000611068 CYP2E1P05181 493 aaPredicted RBP18.94■□□□□ 0.62
RTN1-209ENST00000611068 SUSD4Q5VX71 490 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 ATG9AQ7Z3C6 839 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 GREM2Q9H772 168 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 TJP1Q07157 1748 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 CHGBP05060 677 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 PCCAP05165 728 aaPredicted RBP18.94■□□□□ 0.62
RTN1-209ENST00000611068 TNNI3KQ59H18 835 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 SMARCC1Q92922 1105 aaPredicted RBP18.94■□□□□ 0.62
RTN1-209ENST00000611068 FPGT-TNNI3KV9GXZ4 949 aa18.94■□□□□ 0.62
RTN1-209ENST00000611068 AMIGO3Q86WK7 504 aa18.93■□□□□ 0.62
RTN1-209ENST00000611068 DDX41Q9UJV9 622 aaKnown RBP18.93■□□□□ 0.62
RTN1-209ENST00000611068 MYH14Q7Z406 1995 aaKnown RBP18.93■□□□□ 0.62
RTN1-209ENST00000611068 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
RTN1-209ENST00000611068 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
RTN1-209ENST00000611068 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
RTN1-209ENST00000611068 NIP7Q9Y221 180 aaKnown RBP eCLIP18.93■□□□□ 0.62
RTN1-209ENST00000611068 CNTROBQ8N137 903 aa18.92■□□□□ 0.62
RTN1-209ENST00000611068 GPATCH3Q96I76 525 aa18.92■□□□□ 0.62
RTN1-209ENST00000611068 PHF14O94880 888 aa18.92■□□□□ 0.62
RTN1-209ENST00000611068 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
RTN1-209ENST00000611068 TRIM28Q13263 835 aaKnown RBP18.91■□□□□ 0.62
RTN1-209ENST00000611068 CCNL1Q9UK58 526 aaPredicted RBP18.91■□□□□ 0.62
RTN1-209ENST00000611068 NAA30Q147X3 362 aaPredicted RBP18.91■□□□□ 0.62
RTN1-209ENST00000611068 SRP68Q9UHB9 627 aaKnown RBP18.91■□□□□ 0.62
RTN1-209ENST00000611068 ITGA6P23229 1130 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
RTN1-209ENST00000611068 USP25Q9UHP3 1055 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 FEZ2Q9UHY8 353 aaPredicted RBP18.9■□□□□ 0.62
RTN1-209ENST00000611068 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 GNPATO15228 680 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 REC8O95072 547 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 ZNF34Q8IZ26 560 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 DIAPH3Q9NSV4 1193 aa18.9■□□□□ 0.62
RTN1-209ENST00000611068 EYA2O00167 538 aa18.89■□□□□ 0.62
RTN1-209ENST00000611068 NUCB2P80303 420 aa18.89■□□□□ 0.62
RTN1-209ENST00000611068 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms