RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
PABPC1-224ENST00000610907 TCHHQ07283 1943 aa12.4□□□□□ -0.42
PABPC1-224ENST00000610907 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 RNF113AO15541 343 aaKnown RBP12.39□□□□□ -0.43
PABPC1-224ENST00000610907 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-224ENST00000610907 CYP21A2P08686 494 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 KRT85P78386 507 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
PABPC1-224ENST00000610907 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 LLPHQ9BRT6 129 aaKnown RBP12.39□□□□□ -0.43
PABPC1-224ENST00000610907 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 ELP1O95163 1332 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 LRP6O75581 1613 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 DISP2A7MBM2 1401 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 GOLIM4O00461 696 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 LRRC24Q50LG9 513 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
PABPC1-224ENST00000610907 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 VPS37CA5D8V6 355 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 MCM5P33992 734 aa12.38□□□□□ -0.43
PABPC1-224ENST00000610907 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
PABPC1-224ENST00000610907 SCAND2PQ9GZW5 306 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-224ENST00000610907 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
PABPC1-224ENST00000610907 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
PABPC1-224ENST00000610907 BCL9O00512 1426 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 Q6ZUG5 572 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 ZNF594Q96JF6 807 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-224ENST00000610907 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
PABPC1-224ENST00000610907 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 CTNNA3Q9UI47 895 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 KIF3AQ9Y496 699 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 TAF6LQ9Y6J9 622 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
PABPC1-224ENST00000610907 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 FIBPO43427 364 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 PFKFB2O60825 505 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 EXOSC10Q01780 885 aaKnown RBP12.36□□□□□ -0.43
PABPC1-224ENST00000610907 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 TTC39AQ5SRH9 613 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 GORABQ5T7V8 394 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 CCDC129Q6ZRS4 1044 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 ZNF512BQ96KM6 892 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-224ENST00000610907 PUS3Q9BZE2 481 aaKnown RBP12.36□□□□□ -0.43
PABPC1-224ENST00000610907 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-224ENST00000610907 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
PABPC1-224ENST00000610907 EXOC5O00471 708 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 HSPD1P10809 573 aaKnown RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 SMARCC2Q8TAQ2 1214 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 AK7Q96M32 723 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 NOL7Q9UMY1 257 aaKnown RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 ITGB4P16144 1822 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 FGD1P98174 961 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 FBXO41Q8TF61 875 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-224ENST00000610907 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 TCEANC2Q96MN5 208 aa12.35□□□□□ -0.43
PABPC1-224ENST00000610907 MAST3O60307 1309 aa12.34□□□□□ -0.43
PABPC1-224ENST00000610907 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
PABPC1-224ENST00000610907 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
PABPC1-224ENST00000610907 IL6STP40189 918 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-224ENST00000610907 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-224ENST00000610907 ZSCAN25Q6NSZ9 544 aa12.34□□□□□ -0.43
PABPC1-224ENST00000610907 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
PABPC1-224ENST00000610907 TTLL11Q8NHH1 800 aa12.34□□□□□ -0.43
PABPC1-224ENST00000610907 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
PABPC1-224ENST00000610907 E7EWF7 191 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 EVCP57679 992 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 STK3Q13188 491 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-224ENST00000610907 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-224ENST00000610907 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 APPBP2Q92624 585 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 BRF1Q92994 677 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
PABPC1-224ENST00000610907 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
PABPC1-224ENST00000610907 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-224ENST00000610907 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-224ENST00000610907 PDE8AO60658 829 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 CHGBP05060 677 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 CTSWP56202 376 aa12.32□□□□□ -0.44
PABPC1-224ENST00000610907 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
PABPC1-224ENST00000610907 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms