RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
TPM1-233ENST00000610733 ATP10DQ9P241 1426 aa11.13□□□□□ -0.63
TPM1-233ENST00000610733 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
TPM1-233ENST00000610733 CHD1O14646 1710 aa11.13□□□□□ -0.63
TPM1-233ENST00000610733 SASH1O94885 1247 aa11.13□□□□□ -0.63
TPM1-233ENST00000610733 A1BGP04217 495 aa11.13□□□□□ -0.63
TPM1-233ENST00000610733 HINFPQ9BQA5 517 aa11.13□□□□□ -0.63
TPM1-233ENST00000610733 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM1-233ENST00000610733 GLI2P10070 1586 aa11.13□□□□□ -0.63
TPM1-233ENST00000610733 ZNF213O14771 459 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
TPM1-233ENST00000610733 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
TPM1-233ENST00000610733 AFMP43652 599 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 ERCC6LQ2NKX8 1250 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 KCNF1Q9H3M0 494 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 ARGLU1Q9NWB6 273 aaPredicted RBP11.12□□□□□ -0.63
TPM1-233ENST00000610733 PLXNC1O60486 1568 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 TTC41PQ6P2S7 1318 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 CCDC144BQ3MJ40 725 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 STAMQ92783 540 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 FAM89AQ96GI7 184 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 ZSWIM6Q9HCJ5 1215 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 STAP2Q9UGK3 403 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 CEP152O94986 1710 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 ATF3P18847 181 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 PRDM11Q9NQV5 511 aa11.12□□□□□ -0.63
TPM1-233ENST00000610733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
TPM1-233ENST00000610733 KIAA0232Q92628 1395 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 TDO2P48775 406 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 UBASH3AP57075 661 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 ZNF827Q17R98 1081 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 FKBP15Q5T1M5 1219 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
TPM1-233ENST00000610733 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
TPM1-233ENST00000610733 NCOA3Q9Y6Q9 1424 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 PNPLA6Q8IY17 1366 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 TNRQ92752 1358 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 ZBTB22O15209 634 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 PRC1O43663 620 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 CYP21A2P08686 494 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
TPM1-233ENST00000610733 EEF2KMTQ96G04 330 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 CLSTN2Q9H4D0 955 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 LZTFL1Q9NQ48 299 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 ERICH2A1L162 156 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 SCRN1Q12765 414 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 MCM6Q14566 821 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 LONRF3Q496Y0 759 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 TET3O43151 1660 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 ABCC3O15438 1527 aa11.11□□□□□ -0.63
TPM1-233ENST00000610733 DHX16O60231 1041 aaKnown RBP11.1□□□□□ -0.63
TPM1-233ENST00000610733 GIGYF1O75420 1035 aaPredicted RBP11.1□□□□□ -0.63
TPM1-233ENST00000610733 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 BICDL1Q6ZP65 573 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 FAM170AA1A519 330 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 IBSPP21815 317 aaPredicted RBP11.1□□□□□ -0.63
TPM1-233ENST00000610733 SYKP43405 635 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 LDHAL6AQ6ZMR3 332 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 AIDAQ96BJ3 306 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 XPO4Q9C0E2 1151 aaKnown RBP11.1□□□□□ -0.63
TPM1-233ENST00000610733 EPC1Q9H2F5 836 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 PUF60Q9UHX1 559 aaKnown RBP11.1□□□□□ -0.63
TPM1-233ENST00000610733 JAG2Q9Y219 1238 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 LRRC24Q50LG9 513 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 PGBD1Q96JS3 809 aa11.1□□□□□ -0.63
TPM1-233ENST00000610733 SPTLC2O15270 562 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 ERCC3P19447 782 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 ZNF790Q6PG37 636 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 PUS3Q9BZE2 481 aaKnown RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 RPAP1Q9BWH6 1393 aaPredicted RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 SMTNL1A8MU46 457 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 NAP1L1P55209 391 aaKnown RBP11.09□□□□□ -0.63
TPM1-233ENST00000610733 GCKRQ14397 625 aa11.09□□□□□ -0.63
TPM1-233ENST00000610733 DPCR1Q3MIW9 517 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms