RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 YDJCA8MPS7 323 aa20.87■□□□□ 0.93
TPGS2-220ENST00000610723 TNIP1Q15025 636 aa20.87■□□□□ 0.93
TPGS2-220ENST00000610723 ZC3H12CQ9C0D7 883 aaKnown RBP20.87■□□□□ 0.93
TPGS2-220ENST00000610723 SRCIN1Q9C0H9 1055 aa20.87■□□□□ 0.93
TPGS2-220ENST00000610723 ITGA6P23229 1130 aa20.87■□□□□ 0.93
TPGS2-220ENST00000610723 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
TPGS2-220ENST00000610723 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
TPGS2-220ENST00000610723 TRMT2AQ8IZ69 625 aaKnown RBP20.87■□□□□ 0.93
TPGS2-220ENST00000610723 BSDC1Q9NW68 430 aaPredicted RBP20.87■□□□□ 0.93
TPGS2-220ENST00000610723 C9orf78Q9NZ63 289 aaPredicted RBP20.87■□□□□ 0.93
TPGS2-220ENST00000610723 G3V3G9 751 aa20.86■□□□□ 0.93
TPGS2-220ENST00000610723 ECE2O60344 883 aa20.86■□□□□ 0.93
TPGS2-220ENST00000610723 ALDH1L1O75891 902 aa20.86■□□□□ 0.93
TPGS2-220ENST00000610723 CSF1RP07333 972 aa20.86■□□□□ 0.93
TPGS2-220ENST00000610723 GMPSP49915 693 aaPredicted RBP20.86■□□□□ 0.93
TPGS2-220ENST00000610723 DCAF8Q5TAQ9 597 aa20.86■□□□□ 0.93
TPGS2-220ENST00000610723 CHMP3Q9Y3E7 222 aa20.86■□□□□ 0.93
TPGS2-220ENST00000610723 XDHP47989 1333 aa20.85■□□□□ 0.93
TPGS2-220ENST00000610723 GRM8O00222 908 aa20.85■□□□□ 0.93
TPGS2-220ENST00000610723 MINPP1Q9UNW1 487 aa20.85■□□□□ 0.93
TPGS2-220ENST00000610723 LTBP1Q14766 1721 aa20.85■□□□□ 0.93
TPGS2-220ENST00000610723 MYH3P11055 1940 aa20.84■□□□□ 0.93
TPGS2-220ENST00000610723 ATP2B4P23634 1241 aa20.84■□□□□ 0.93
TPGS2-220ENST00000610723 FOXO4P98177 505 aa20.84■□□□□ 0.93
TPGS2-220ENST00000610723 MPHOSPH8Q99549 860 aa20.84■□□□□ 0.93
TPGS2-220ENST00000610723 GPRC5DQ9NZD1 345 aa20.84■□□□□ 0.93
TPGS2-220ENST00000610723 PTPRCP08575 1304 aa20.84■□□□□ 0.93
TPGS2-220ENST00000610723 CEP350Q5VT06 3117 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 ANKRD18BA2A2Z9 1011 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 PSMD14O00487 310 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 MAP1SQ66K74 1059 aaPredicted RBP20.83■□□□□ 0.93
TPGS2-220ENST00000610723 DNAJC5GQ8N7S2 189 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 KCNQ5Q9NR82 932 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
TPGS2-220ENST00000610723 WTIPA6NIX2 430 aaPredicted RBP20.82■□□□□ 0.92
TPGS2-220ENST00000610723 EPHA10Q5JZY3 1008 aa20.82■□□□□ 0.92
TPGS2-220ENST00000610723 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
TPGS2-220ENST00000610723 USP50Q70EL3 339 aaPredicted RBP20.82■□□□□ 0.92
TPGS2-220ENST00000610723 ZBTB12Q9Y330 459 aaPredicted RBP20.82■□□□□ 0.92
TPGS2-220ENST00000610723 IFIT5Q13325 482 aaKnown RBP20.81■□□□□ 0.92
TPGS2-220ENST00000610723 CNTROBQ8N137 903 aa20.81■□□□□ 0.92
TPGS2-220ENST00000610723 ADARB2Q9NS39 739 aaKnown RBP20.81■□□□□ 0.92
TPGS2-220ENST00000610723 SPEF2Q9C093 1822 aa20.8■□□□□ 0.92
TPGS2-220ENST00000610723 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
TPGS2-220ENST00000610723 CNOT7Q9UIV1 285 aaKnown RBP20.8■□□□□ 0.92
TPGS2-220ENST00000610723 ITGBL1O95965 494 aaPredicted RBP20.79■□□□□ 0.92
TPGS2-220ENST00000610723 CT47B1P0C2W7 299 aaPredicted RBP20.79■□□□□ 0.92
TPGS2-220ENST00000610723 SUCLG2Q96I99 432 aa20.79■□□□□ 0.92
TPGS2-220ENST00000610723 ADAMTSL1Q8N6G6 1762 aa20.79■□□□□ 0.92
TPGS2-220ENST00000610723 SHTN1A0MZ66 631 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 NBPF7P0C2Y1 421 aaPredicted RBP20.78■□□□□ 0.92
TPGS2-220ENST00000610723 KLRG1Q96E93 195 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 ANKRD2Q9GZV1 360 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 H7C1D1 291 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 HNRNPUQ00839 825 aaKnown RBP eCLIP20.78■□□□□ 0.92
TPGS2-220ENST00000610723 CCDC57Q2TAC2 916 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
TPGS2-220ENST00000610723 CHRNDQ07001 517 aa20.77■□□□□ 0.91
TPGS2-220ENST00000610723 ZNF594Q96JF6 807 aaPredicted RBP20.77■□□□□ 0.91
TPGS2-220ENST00000610723 NOB1Q9ULX3 412 aaKnown RBP20.77■□□□□ 0.91
TPGS2-220ENST00000610723 LEMD3Q9Y2U8 911 aa20.77■□□□□ 0.91
TPGS2-220ENST00000610723 MED23Q9ULK4 1368 aa20.76■□□□□ 0.91
TPGS2-220ENST00000610723 KCNJ4P48050 445 aa20.76■□□□□ 0.91
TPGS2-220ENST00000610723 DPF2Q92785 391 aa20.76■□□□□ 0.91
TPGS2-220ENST00000610723 CREBZFQ9NS37 354 aa20.76■□□□□ 0.91
TPGS2-220ENST00000610723 ZNF804BA4D1E1 1349 aa20.75■□□□□ 0.91
TPGS2-220ENST00000610723 UTYO14607 1347 aa20.75■□□□□ 0.91
TPGS2-220ENST00000610723 VIL1P09327 827 aaKnown RBP20.75■□□□□ 0.91
TPGS2-220ENST00000610723 RPS12P25398 132 aaKnown RBP20.75■□□□□ 0.91
TPGS2-220ENST00000610723 HELBQ8NG08 1087 aaPredicted RBP20.75■□□□□ 0.91
TPGS2-220ENST00000610723 TRPM4Q8TD43 1214 aa20.75■□□□□ 0.91
TPGS2-220ENST00000610723 KAZALD1Q96I82 304 aa20.75■□□□□ 0.91
TPGS2-220ENST00000610723 HIRAP54198 1017 aaPredicted RBP20.74■□□□□ 0.91
TPGS2-220ENST00000610723 SAMD7Q7Z3H4 446 aa20.74■□□□□ 0.91
TPGS2-220ENST00000610723 TXNRD3Q86VQ6 643 aa20.74■□□□□ 0.91
TPGS2-220ENST00000610723 TMEM88BA6NKF7 163 aa20.73■□□□□ 0.91
TPGS2-220ENST00000610723 TAF5LO75529 589 aa20.73■□□□□ 0.91
TPGS2-220ENST00000610723 RARSP54136 660 aaKnown RBP20.73■□□□□ 0.91
TPGS2-220ENST00000610723 TBC1D10BQ4KMP7 808 aaPredicted RBP20.73■□□□□ 0.91
TPGS2-220ENST00000610723 RBM26Q5T8P6 1007 aaKnown RBP20.73■□□□□ 0.91
TPGS2-220ENST00000610723 LDHAL6AQ6ZMR3 332 aa20.73■□□□□ 0.91
TPGS2-220ENST00000610723 PODNQ7Z5L7 613 aa20.73■□□□□ 0.91
TPGS2-220ENST00000610723 FBXW7Q969H0 707 aa20.73■□□□□ 0.91
TPGS2-220ENST00000610723 BICC1Q9H694 974 aaKnown RBP20.73■□□□□ 0.91
TPGS2-220ENST00000610723 CNNM1Q9NRU3 951 aa20.73■□□□□ 0.91
TPGS2-220ENST00000610723 PLIN1O60240 522 aa20.72■□□□□ 0.91
TPGS2-220ENST00000610723 KLRK1P26718 216 aa20.72■□□□□ 0.91
TPGS2-220ENST00000610723 FMR1Q06787 632 aaKnown RBP eCLIP20.72■□□□□ 0.91
TPGS2-220ENST00000610723 RSBN1LQ6PCB5 846 aaPredicted RBP20.72■□□□□ 0.91
TPGS2-220ENST00000610723 USP44Q9H0E7 712 aa20.72■□□□□ 0.91
TPGS2-220ENST00000610723 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
TPGS2-220ENST00000610723 USP17L3A6NCW0 530 aa20.71■□□□□ 0.91
TPGS2-220ENST00000610723 USP17L4A6NCW7 530 aa20.71■□□□□ 0.91
TPGS2-220ENST00000610723 SNAP23O00161 211 aa20.71■□□□□ 0.91
TPGS2-220ENST00000610723 TRAF5O00463 557 aa20.71■□□□□ 0.91
TPGS2-220ENST00000610723 USP17L1Q7RTZ2 530 aa20.71■□□□□ 0.91
TPGS2-220ENST00000610723 COA1Q9GZY4 146 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms