RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 YEATS4O95619 227 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 FGFR1OPO95684 399 aaKnown RBP16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 TMTC2Q8N394 836 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 HELBQ8NG08 1087 aaPredicted RBP16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 INSRP06213 1382 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 ENOX2Q16206 610 aaKnown RBP16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 CUL5Q93034 780 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 CALML4Q96GE6 196 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
PCDHB16-201ENST00000609684 MATR3P43243 847 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 MTIF2P46199 727 aaKnown RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 DDB1Q16531 1140 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 RAD50Q92878 1312 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 CPA1P15085 419 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 MARCKSP29966 332 aaPredicted RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 CCDC171Q6TFL3 1326 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 IRS4O14654 1257 aaPredicted RBP16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
PCDHB16-201ENST00000609684 ZNF790Q6PG37 636 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 ATP10AO60312 1499 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 GBP3Q9H0R5 595 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 LGR6Q9HBX8 967 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 PYM1Q9BRP8 204 aaKnown RBP16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 DNAJC25Q9H1X3 360 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 AMPD3Q01432 767 aa16.39■□□□□ 0.21
PCDHB16-201ENST00000609684 KIF20AO95235 890 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 USP19O94966 1318 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 KAT6BQ8WYB5 2073 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 NBPF7P0C2Y1 421 aaPredicted RBP16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 HOXB7P09629 217 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 NEFHP12036 1026 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 GSTO1P78417 241 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 ORAI2Q96SN7 254 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
PCDHB16-201ENST00000609684 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 PCDH11XQ9BZA7 1347 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 PCDH11YQ9BZA8 1340 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 SBNO2Q9Y2G9 1366 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 AFMP43652 599 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 CCDC150Q8NCX0 1101 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 SYT1P21579 422 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 DNA2P51530 1060 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 JAKMIP3Q5VZ66 844 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 KLHDC4Q8TBB5 520 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 HSPA2P54652 639 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 HSP90AA4PQ58FG1 418 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
PCDHB16-201ENST00000609684 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 SPTLC2O15270 562 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 UBASH3AP57075 661 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 BMP15O95972 392 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 ST5P78524 1137 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 N4BP3O15049 544 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 TIMM10P62072 90 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 CCDC40Q4G0X9 1142 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 AOPEPQ8N6M6 819 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
PCDHB16-201ENST00000609684 SSR1P43307 286 aaKnown RBP16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 CBX1P83916 185 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 TYRO3Q06418 890 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 TAX1BP1Q86VP1 789 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 MAGEB6Q8N7X4 407 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 ZNF622Q969S3 477 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 ERICH4A6NGS2 130 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 KIAA0754O94854 1291 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
PCDHB16-201ENST00000609684 CFAP65Q6ZU64 1925 aaKnown RBP16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 PLBD2Q8NHP8 589 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 DBNDD2Q9BQY9 259 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 CGNQ9P2M7 1197 aaKnown RBP16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 TCERG1LQ5VWI1 586 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 RTL1A6NKG5 1358 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
PCDHB16-201ENST00000609684 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms