RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 REM2Q8IYK8 340 aaPredicted RBP22.6■■□□□ 1.21
CHMP4A-211ENST00000609024 LRRC37AA6NMS7 1700 aa22.6■■□□□ 1.21
CHMP4A-211ENST00000609024 ATP5J2-PTCD1G3V325 749 aa22.59■■□□□ 1.21
CHMP4A-211ENST00000609024 EGFRP00533 1210 aa22.59■■□□□ 1.21
CHMP4A-211ENST00000609024 HSP90B1P14625 803 aaKnown RBP22.59■■□□□ 1.21
CHMP4A-211ENST00000609024 GGA3Q9NZ52 723 aa22.59■■□□□ 1.21
CHMP4A-211ENST00000609024 ANKIB1Q9P2G1 1089 aa22.59■■□□□ 1.21
CHMP4A-211ENST00000609024 RPS8P62241 208 aaKnown RBP22.58■■□□□ 1.21
CHMP4A-211ENST00000609024 TBC1D16Q8TBP0 767 aa22.58■■□□□ 1.21
CHMP4A-211ENST00000609024 DBF4Q9UBU7 674 aaPredicted RBP22.58■■□□□ 1.21
CHMP4A-211ENST00000609024 DDX60Q8IY21 1712 aaKnown RBP22.57■■□□□ 1.2
CHMP4A-211ENST00000609024 AKAP11Q9UKA4 1901 aa22.57■■□□□ 1.2
CHMP4A-211ENST00000609024 IRS4O14654 1257 aaPredicted RBP22.57■■□□□ 1.2
CHMP4A-211ENST00000609024 KCNQ5Q9NR82 932 aa22.57■■□□□ 1.2
CHMP4A-211ENST00000609024 POLR2AP24928 1970 aaKnown RBP22.57■■□□□ 1.2
CHMP4A-211ENST00000609024 SLC10A3P09131 477 aa22.56■■□□□ 1.2
CHMP4A-211ENST00000609024 CTU1Q7Z7A3 348 aaKnown RBP22.56■■□□□ 1.2
CHMP4A-211ENST00000609024 CDCA5Q96FF9 252 aa22.56■■□□□ 1.2
CHMP4A-211ENST00000609024 ISCA1Q9BUE6 129 aa22.56■■□□□ 1.2
CHMP4A-211ENST00000609024 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
CHMP4A-211ENST00000609024 RTL9Q8NET4 1388 aa22.55■■□□□ 1.2
CHMP4A-211ENST00000609024 UFL1O94874 794 aa22.55■■□□□ 1.2
CHMP4A-211ENST00000609024 VIL1P09327 827 aaKnown RBP22.55■■□□□ 1.2
CHMP4A-211ENST00000609024 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
CHMP4A-211ENST00000609024 GGA1Q9UJY5 639 aa22.55■■□□□ 1.2
CHMP4A-211ENST00000609024 CHL1O00533 1208 aa22.54■■□□□ 1.2
CHMP4A-211ENST00000609024 ANGEL2Q5VTE6 544 aaKnown RBP22.54■■□□□ 1.2
CHMP4A-211ENST00000609024 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
CHMP4A-211ENST00000609024 CSRNP1Q96S65 589 aa22.54■■□□□ 1.2
CHMP4A-211ENST00000609024 HOXB7P09629 217 aa22.53■■□□□ 1.2
CHMP4A-211ENST00000609024 FKBP1BP68106 108 aa22.53■■□□□ 1.2
CHMP4A-211ENST00000609024 SCARF1Q14162 830 aa22.53■■□□□ 1.2
CHMP4A-211ENST00000609024 HDAC9Q9UKV0 1011 aa22.53■■□□□ 1.2
CHMP4A-211ENST00000609024 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
CHMP4A-211ENST00000609024 CCDC146Q8IYE0 955 aa22.52■■□□□ 1.2
CHMP4A-211ENST00000609024 AGBL3Q8NEM8 1001 aa22.52■■□□□ 1.2
CHMP4A-211ENST00000609024 RALBP1Q15311 655 aa22.51■■□□□ 1.19
CHMP4A-211ENST00000609024 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
CHMP4A-211ENST00000609024 RSBN1LQ6PCB5 846 aaPredicted RBP22.51■■□□□ 1.19
CHMP4A-211ENST00000609024 PODXL2Q9NZ53 605 aa22.51■■□□□ 1.19
CHMP4A-211ENST00000609024 USP17L8P0C7I0 530 aa22.5■■□□□ 1.19
CHMP4A-211ENST00000609024 TTLL12Q14166 644 aaPredicted RBP22.5■■□□□ 1.19
CHMP4A-211ENST00000609024 RASAL3Q86YV0 1011 aa22.5■■□□□ 1.19
CHMP4A-211ENST00000609024 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
CHMP4A-211ENST00000609024 PDE4DIPQ5VU43 2346 aa22.49■■□□□ 1.19
CHMP4A-211ENST00000609024 TRIM28Q13263 835 aaKnown RBP22.49■■□□□ 1.19
CHMP4A-211ENST00000609024 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
CHMP4A-211ENST00000609024 PKN2Q16513 984 aaKnown RBP22.49■■□□□ 1.19
CHMP4A-211ENST00000609024 MYOZ2Q9NPC6 264 aa22.49■■□□□ 1.19
CHMP4A-211ENST00000609024 ASTN2O75129 1339 aaPredicted RBP22.49■■□□□ 1.19
CHMP4A-211ENST00000609024 ZNF280AP59817 542 aaPredicted RBP22.48■■□□□ 1.19
CHMP4A-211ENST00000609024 SEC31BQ9NQW1 1179 aa22.48■■□□□ 1.19
CHMP4A-211ENST00000609024 TNRC18O15417 2968 aaPredicted RBP22.47■■□□□ 1.19
CHMP4A-211ENST00000609024 NF2P35240 595 aa22.47■■□□□ 1.19
CHMP4A-211ENST00000609024 PRPF38BQ5VTL8 546 aaKnown RBP22.47■■□□□ 1.19
CHMP4A-211ENST00000609024 DUSP27Q5VZP5 1158 aa22.47■■□□□ 1.19
CHMP4A-211ENST00000609024 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
CHMP4A-211ENST00000609024 PITPNM2Q9BZ72 1349 aa22.47■■□□□ 1.19
CHMP4A-211ENST00000609024 USP17L3A6NCW0 530 aa22.46■■□□□ 1.19
CHMP4A-211ENST00000609024 USP17L4A6NCW7 530 aa22.46■■□□□ 1.19
CHMP4A-211ENST00000609024 USP17L1Q7RTZ2 530 aa22.46■■□□□ 1.19
CHMP4A-211ENST00000609024 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
CHMP4A-211ENST00000609024 HPS5Q9UPZ3 1129 aa22.46■■□□□ 1.19
CHMP4A-211ENST00000609024 XDHP47989 1333 aa22.46■■□□□ 1.19
CHMP4A-211ENST00000609024 PDE8AO60658 829 aa22.45■■□□□ 1.18
CHMP4A-211ENST00000609024 PODNQ7Z5L7 613 aa22.45■■□□□ 1.18
CHMP4A-211ENST00000609024 OGFOD1Q8N543 542 aa22.45■■□□□ 1.18
CHMP4A-211ENST00000609024 CCDC85AQ96PX6 553 aaPredicted RBP22.45■■□□□ 1.18
CHMP4A-211ENST00000609024 MYD88Q99836 296 aa22.45■■□□□ 1.18
CHMP4A-211ENST00000609024 PAPPA2Q9BXP8 1791 aa22.45■■□□□ 1.18
CHMP4A-211ENST00000609024 ATP2B4P23634 1241 aa22.44■■□□□ 1.18
CHMP4A-211ENST00000609024 SCN9AQ15858 1988 aa22.44■■□□□ 1.18
CHMP4A-211ENST00000609024 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
CHMP4A-211ENST00000609024 TRIM35Q9UPQ4 493 aa22.44■■□□□ 1.18
CHMP4A-211ENST00000609024 UBE2Q2LH0YL09 131 aa22.43■■□□□ 1.18
CHMP4A-211ENST00000609024 TBC1D8O95759 1140 aa22.43■■□□□ 1.18
CHMP4A-211ENST00000609024 CCDC191Q8NCU4 936 aa22.43■■□□□ 1.18
CHMP4A-211ENST00000609024 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
CHMP4A-211ENST00000609024 ZNF609O15014 1411 aa22.42■■□□□ 1.18
CHMP4A-211ENST00000609024 DDX58O95786 925 aaKnown RBP22.42■■□□□ 1.18
CHMP4A-211ENST00000609024 ZNF296Q8WUU4 475 aaPredicted RBP22.42■■□□□ 1.18
CHMP4A-211ENST00000609024 CDC5LQ99459 802 aaKnown RBP22.42■■□□□ 1.18
CHMP4A-211ENST00000609024 COL4A1P02462 1669 aa22.42■■□□□ 1.18
CHMP4A-211ENST00000609024 PCCAP05165 728 aaPredicted RBP22.41■■□□□ 1.18
CHMP4A-211ENST00000609024 MOB2Q70IA6 237 aa22.41■■□□□ 1.18
CHMP4A-211ENST00000609024 SREBF2Q12772 1141 aa22.4■■□□□ 1.18
CHMP4A-211ENST00000609024 CHMP4AQ9BY43 222 aa22.4■■□□□ 1.18
CHMP4A-211ENST00000609024 SCAF8Q9UPN6 1271 aaKnown RBP22.4■■□□□ 1.18
CHMP4A-211ENST00000609024 MYBBP1AQ9BQG0 1328 aaKnown RBP22.39■■□□□ 1.18
CHMP4A-211ENST00000609024 PRAMEF18Q5VWM3 479 aa22.39■■□□□ 1.17
CHMP4A-211ENST00000609024 JARID2Q92833 1246 aaPredicted RBP22.39■■□□□ 1.17
CHMP4A-211ENST00000609024 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
CHMP4A-211ENST00000609024 MBIPQ9NS73 344 aa22.39■■□□□ 1.17
CHMP4A-211ENST00000609024 MYO3BQ8WXR4 1341 aa22.38■■□□□ 1.17
CHMP4A-211ENST00000609024 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
CHMP4A-211ENST00000609024 MKRN3Q13064 507 aaKnown RBP22.38■■□□□ 1.17
CHMP4A-211ENST00000609024 ARMC9Q7Z3E5 817 aa22.38■■□□□ 1.17
CHMP4A-211ENST00000609024 GMLQ99445 158 aa22.38■■□□□ 1.17
CHMP4A-211ENST00000609024 GPR25O00155 361 aa22.37■■□□□ 1.17
CHMP4A-211ENST00000609024 ELL2O00472 640 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms