RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
LINC01278-203ENST00000608788 SH3TC1Q8TE82 1336 aa18.72■□□□□ 0.59
LINC01278-203ENST00000608788 TCIRG1Q13488 830 aa18.71■□□□□ 0.59
LINC01278-203ENST00000608788 WASHC4Q2M389 1173 aa18.71■□□□□ 0.59
LINC01278-203ENST00000608788 CTU1Q7Z7A3 348 aaKnown RBP18.71■□□□□ 0.59
LINC01278-203ENST00000608788 DBNDD1Q9H9R9 158 aa18.71■□□□□ 0.59
LINC01278-203ENST00000608788 KCNQ5Q9NR82 932 aa18.71■□□□□ 0.59
LINC01278-203ENST00000608788 POLLQ9UGP5 575 aa18.71■□□□□ 0.59
LINC01278-203ENST00000608788 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
LINC01278-203ENST00000608788 SCN9AQ15858 1988 aa18.7■□□□□ 0.58
LINC01278-203ENST00000608788 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
LINC01278-203ENST00000608788 DCPSQ96C86 337 aaKnown RBP18.7■□□□□ 0.58
LINC01278-203ENST00000608788 ZNF609O15014 1411 aa18.69■□□□□ 0.58
LINC01278-203ENST00000608788 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
LINC01278-203ENST00000608788 XAGE3Q8WTP9 111 aa18.69■□□□□ 0.58
LINC01278-203ENST00000608788 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
LINC01278-203ENST00000608788 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
LINC01278-203ENST00000608788 CENPFP49454 3210 aa18.68■□□□□ 0.58
LINC01278-203ENST00000608788 NEFMP07197 916 aa18.68■□□□□ 0.58
LINC01278-203ENST00000608788 SF3B3Q15393 1217 aaKnown RBP18.68■□□□□ 0.58
LINC01278-203ENST00000608788 ASTN2O75129 1339 aaPredicted RBP18.68■□□□□ 0.58
LINC01278-203ENST00000608788 ECE2O60344 883 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
LINC01278-203ENST00000608788 GPSM2P81274 684 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 KIF4BQ2VIQ3 1234 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 RASAL3Q86YV0 1011 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 GGA3Q9NZ52 723 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 NSFL1CQ9UNZ2 370 aaKnown RBP18.67■□□□□ 0.58
LINC01278-203ENST00000608788 HPS5Q9UPZ3 1129 aa18.67■□□□□ 0.58
LINC01278-203ENST00000608788 BRCA2P51587 3418 aa18.66■□□□□ 0.58
LINC01278-203ENST00000608788 RBM26Q5T8P6 1007 aaKnown RBP18.66■□□□□ 0.58
LINC01278-203ENST00000608788 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
LINC01278-203ENST00000608788 RIMBP2O15034 1052 aa18.65■□□□□ 0.58
LINC01278-203ENST00000608788 ZNF280AP59817 542 aaPredicted RBP18.65■□□□□ 0.58
LINC01278-203ENST00000608788 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
LINC01278-203ENST00000608788 SULF1Q8IWU6 871 aa18.65■□□□□ 0.58
LINC01278-203ENST00000608788 TBC1D16Q8TBP0 767 aa18.65■□□□□ 0.58
LINC01278-203ENST00000608788 SSUH2Q9Y2M2 353 aa18.65■□□□□ 0.58
LINC01278-203ENST00000608788 PAPPA2Q9BXP8 1791 aa18.64■□□□□ 0.57
LINC01278-203ENST00000608788 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
LINC01278-203ENST00000608788 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
LINC01278-203ENST00000608788 C6orf229H3BNL8 230 aa18.63■□□□□ 0.57
LINC01278-203ENST00000608788 FKBP1BP68106 108 aa18.63■□□□□ 0.57
LINC01278-203ENST00000608788 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
LINC01278-203ENST00000608788 EYA3Q99504 573 aa18.63■□□□□ 0.57
LINC01278-203ENST00000608788 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
LINC01278-203ENST00000608788 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
LINC01278-203ENST00000608788 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
LINC01278-203ENST00000608788 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
LINC01278-203ENST00000608788 PSME4Q14997 1843 aa18.62■□□□□ 0.57
LINC01278-203ENST00000608788 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
LINC01278-203ENST00000608788 ANGEL2Q5VTE6 544 aaKnown RBP18.61■□□□□ 0.57
LINC01278-203ENST00000608788 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
LINC01278-203ENST00000608788 ZNF296Q8WUU4 475 aaPredicted RBP18.61■□□□□ 0.57
LINC01278-203ENST00000608788 GMLQ99445 158 aa18.61■□□□□ 0.57
LINC01278-203ENST00000608788 PITPNM2Q9BZ72 1349 aa18.6■□□□□ 0.57
LINC01278-203ENST00000608788 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
LINC01278-203ENST00000608788 SCARF1Q14162 830 aa18.6■□□□□ 0.57
LINC01278-203ENST00000608788 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
LINC01278-203ENST00000608788 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
LINC01278-203ENST00000608788 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
LINC01278-203ENST00000608788 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
LINC01278-203ENST00000608788 RSBN1LQ6PCB5 846 aaPredicted RBP18.59■□□□□ 0.57
LINC01278-203ENST00000608788 AGBL3Q8NEM8 1001 aa18.59■□□□□ 0.57
LINC01278-203ENST00000608788 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
LINC01278-203ENST00000608788 CHPF2Q9P2E5 772 aa18.59■□□□□ 0.57
LINC01278-203ENST00000608788 RIPK4P57078 832 aa18.58■□□□□ 0.56
LINC01278-203ENST00000608788 MOB2Q70IA6 237 aa18.58■□□□□ 0.56
LINC01278-203ENST00000608788 ZC3H12CQ9C0D7 883 aaKnown RBP18.58■□□□□ 0.56
LINC01278-203ENST00000608788 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
LINC01278-203ENST00000608788 CHL1O00533 1208 aa18.57■□□□□ 0.56
LINC01278-203ENST00000608788 TBC1D8O95759 1140 aa18.57■□□□□ 0.56
LINC01278-203ENST00000608788 TM4SF4P48230 202 aa18.57■□□□□ 0.56
LINC01278-203ENST00000608788 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
LINC01278-203ENST00000608788 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
LINC01278-203ENST00000608788 CFHR5Q9BXR6 569 aa18.56■□□□□ 0.56
LINC01278-203ENST00000608788 GPR25O00155 361 aa18.55■□□□□ 0.56
LINC01278-203ENST00000608788 UFL1O94874 794 aa18.55■□□□□ 0.56
LINC01278-203ENST00000608788 TMPOP42166 694 aaKnown RBP18.55■□□□□ 0.56
LINC01278-203ENST00000608788 FBXO46Q6PJ61 603 aaPredicted RBP18.55■□□□□ 0.56
LINC01278-203ENST00000608788 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
LINC01278-203ENST00000608788 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
LINC01278-203ENST00000608788 ZNF646O15015 1829 aaPredicted RBP18.54■□□□□ 0.56
LINC01278-203ENST00000608788 UBE2Q2LH0YL09 131 aa18.54■□□□□ 0.56
LINC01278-203ENST00000608788 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
LINC01278-203ENST00000608788 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
LINC01278-203ENST00000608788 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
LINC01278-203ENST00000608788 HDAC9Q9UKV0 1011 aa18.54■□□□□ 0.56
LINC01278-203ENST00000608788 HOXB7P09629 217 aa18.53■□□□□ 0.56
LINC01278-203ENST00000608788 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
LINC01278-203ENST00000608788 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
LINC01278-203ENST00000608788 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
LINC01278-203ENST00000608788 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.56
LINC01278-203ENST00000608788 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
LINC01278-203ENST00000608788 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
LINC01278-203ENST00000608788 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.56
LINC01278-203ENST00000608788 SZT2Q5T011 3432 aa18.51■□□□□ 0.55
LINC01278-203ENST00000608788 PRAMEF18Q5VWM3 479 aa18.51■□□□□ 0.55
LINC01278-203ENST00000608788 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms