RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 RGS9O75916 674 aaPredicted RBP10.7□□□□□ -0.7
LINC00343-211ENST00000608426 GHRHP01286 108 aa10.7□□□□□ -0.7
LINC00343-211ENST00000608426 HOXD8P13378 290 aaPredicted RBP10.7□□□□□ -0.7
LINC00343-211ENST00000608426 HYAL2Q12891 473 aa10.7□□□□□ -0.7
LINC00343-211ENST00000608426 PERM1Q5SV97 790 aa10.7□□□□□ -0.7
LINC00343-211ENST00000608426 C1orf127Q8N9H9 656 aa10.7□□□□□ -0.7
LINC00343-211ENST00000608426 KANSL3Q9P2N6 904 aa10.7□□□□□ -0.7
LINC00343-211ENST00000608426 LILRB5O75023 590 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 TNFRSF21O75509 655 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 CES1P23141 567 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
LINC00343-211ENST00000608426 LINC00114Q6XXX2 140 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 C20orf204Q6ZNR8 217 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 SNX29Q8TEQ0 813 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 RBSNQ9H1K0 784 aa10.69□□□□□ -0.7
LINC00343-211ENST00000608426 FOXD3Q9UJU5 478 aaPredicted RBP10.69□□□□□ -0.7
LINC00343-211ENST00000608426 PIK3R2O00459 728 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 PHACTR2O75167 634 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 MAPK1P28482 360 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 IRS1P35568 1242 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 SPACA7Q96KW9 195 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 CITED4Q96RK1 184 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 LPIN3Q9BQK8 851 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 SMG9Q9H0W8 520 aaKnown RBP10.68□□□□□ -0.7
LINC00343-211ENST00000608426 DCTN4Q9UJW0 460 aa10.68□□□□□ -0.7
LINC00343-211ENST00000608426 GNB5O14775 395 aa10.67□□□□□ -0.7
LINC00343-211ENST00000608426 NCAPG2Q86XI2 1143 aa10.67□□□□□ -0.7
LINC00343-211ENST00000608426 PLD4Q96BZ4 506 aa10.67□□□□□ -0.7
LINC00343-211ENST00000608426 CHRDQ9H2X0 955 aa10.67□□□□□ -0.7
LINC00343-211ENST00000608426 FRRS1LQ9P0K9 344 aa10.67□□□□□ -0.7
LINC00343-211ENST00000608426 FAM129BQ96TA1 746 aa10.66□□□□□ -0.7
LINC00343-211ENST00000608426 PMEPA1Q969W9 287 aa10.65□□□□□ -0.7
LINC00343-211ENST00000608426 RBCK1Q9BYM8 510 aa10.65□□□□□ -0.7
LINC00343-211ENST00000608426 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
LINC00343-211ENST00000608426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.65□□□□□ -0.7
LINC00343-211ENST00000608426 EREGO14944 169 aa10.64□□□□□ -0.71
LINC00343-211ENST00000608426 KIF4AO95239 1232 aa10.64□□□□□ -0.71
LINC00343-211ENST00000608426 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
LINC00343-211ENST00000608426 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
LINC00343-211ENST00000608426 GPR182O15218 404 aa10.63□□□□□ -0.71
LINC00343-211ENST00000608426 AFF1P51825 1210 aaKnown RBP10.63□□□□□ -0.71
LINC00343-211ENST00000608426 ATP11AP98196 1134 aa10.63□□□□□ -0.71
LINC00343-211ENST00000608426 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
LINC00343-211ENST00000608426 NIF3L1Q9GZT8 377 aa10.63□□□□□ -0.71
LINC00343-211ENST00000608426 NOP53Q9NZM5 478 aaKnown RBP10.63□□□□□ -0.71
LINC00343-211ENST00000608426 SALL4Q9UJQ4 1053 aa10.63□□□□□ -0.71
LINC00343-211ENST00000608426 NEFLP07196 543 aa10.62□□□□□ -0.71
LINC00343-211ENST00000608426 NID1P14543 1247 aa10.62□□□□□ -0.71
LINC00343-211ENST00000608426 COL9A3Q14050 684 aaPredicted RBP10.62□□□□□ -0.71
LINC00343-211ENST00000608426 TMC7Q7Z402 723 aa10.62□□□□□ -0.71
LINC00343-211ENST00000608426 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
LINC00343-211ENST00000608426 ZFYVE28Q9HCC9 887 aa10.62□□□□□ -0.71
LINC00343-211ENST00000608426 AMOTL2Q9Y2J4 779 aa10.62□□□□□ -0.71
LINC00343-211ENST00000608426 KCNMA1Q12791 1236 aa10.61□□□□□ -0.71
LINC00343-211ENST00000608426 ORC1Q13415 861 aa10.61□□□□□ -0.71
LINC00343-211ENST00000608426 GDF6Q6KF10 455 aaPredicted RBP10.61□□□□□ -0.71
LINC00343-211ENST00000608426 SND1Q7KZF4 910 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00343-211ENST00000608426 TTC9Q92623 222 aa10.61□□□□□ -0.71
LINC00343-211ENST00000608426 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
LINC00343-211ENST00000608426 POLR3DP05423 398 aaPredicted RBP10.6□□□□□ -0.71
LINC00343-211ENST00000608426 ACPPP15309 386 aa10.6□□□□□ -0.71
LINC00343-211ENST00000608426 GRIK5Q16478 980 aa10.6□□□□□ -0.71
LINC00343-211ENST00000608426 TRAPPC3LQ5T215 181 aa10.6□□□□□ -0.71
LINC00343-211ENST00000608426 CEP135Q66GS9 1140 aa10.6□□□□□ -0.71
LINC00343-211ENST00000608426 CEP120Q8N960 986 aa10.6□□□□□ -0.71
LINC00343-211ENST00000608426 SPDYE3A6NKU9 549 aa10.59□□□□□ -0.71
LINC00343-211ENST00000608426 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00343-211ENST00000608426 IGHA2P01877 340 aa10.59□□□□□ -0.71
LINC00343-211ENST00000608426 RASSF7Q02833 373 aa10.59□□□□□ -0.71
LINC00343-211ENST00000608426 TRIM33Q9UPN9 1127 aa10.59□□□□□ -0.71
LINC00343-211ENST00000608426 EDN3P14138 238 aa10.58□□□□□ -0.72
LINC00343-211ENST00000608426 COL8A1P27658 744 aa10.58□□□□□ -0.72
LINC00343-211ENST00000608426 MSL1Q68DK7 614 aa10.58□□□□□ -0.72
LINC00343-211ENST00000608426 WFDC8Q8IUA0 241 aa10.58□□□□□ -0.72
LINC00343-211ENST00000608426 ZSCAN29Q8IWY8 852 aaPredicted RBP10.58□□□□□ -0.72
LINC00343-211ENST00000608426 DMRTC2Q8IXT2 367 aaPredicted RBP10.58□□□□□ -0.72
LINC00343-211ENST00000608426 PBX4Q9BYU1 374 aa10.58□□□□□ -0.72
LINC00343-211ENST00000608426 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
LINC00343-211ENST00000608426 CPNE3O75131 537 aaKnown RBP10.57□□□□□ -0.72
LINC00343-211ENST00000608426 TRPA1O75762 1119 aa10.57□□□□□ -0.72
LINC00343-211ENST00000608426 USPL1Q5W0Q7 1092 aa10.57□□□□□ -0.72
LINC00343-211ENST00000608426 ALKBH8Q96BT7 664 aaKnown RBP10.57□□□□□ -0.72
LINC00343-211ENST00000608426 LACRTQ9GZZ8 138 aa10.57□□□□□ -0.72
LINC00343-211ENST00000608426 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
LINC00343-211ENST00000608426 GSK3AP49840 483 aa10.56□□□□□ -0.72
LINC00343-211ENST00000608426 OSMRQ99650 979 aa10.56□□□□□ -0.72
LINC00343-211ENST00000608426 LATS2Q9NRM7 1088 aa10.56□□□□□ -0.72
LINC00343-211ENST00000608426 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
LINC00343-211ENST00000608426 EIF1AYO14602 144 aaKnown RBP10.55□□□□□ -0.72
LINC00343-211ENST00000608426 GDF11O95390 407 aa10.55□□□□□ -0.72
LINC00343-211ENST00000608426 PRRT3Q5FWE3 981 aa10.55□□□□□ -0.72
LINC00343-211ENST00000608426 TMEM151AQ8N4L1 468 aa10.55□□□□□ -0.72
LINC00343-211ENST00000608426 IL22RA1Q8N6P7 574 aa10.55□□□□□ -0.72
LINC00343-211ENST00000608426 ASB16Q96NS5 453 aa10.55□□□□□ -0.72
LINC00343-211ENST00000608426 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
LINC00343-211ENST00000608426 PLCB3Q01970 1234 aa10.54□□□□□ -0.72
LINC00343-211ENST00000608426 TRIM28Q13263 835 aaKnown RBP10.54□□□□□ -0.72
LINC00343-211ENST00000608426 HHIPQ96QV1 700 aa10.54□□□□□ -0.72
LINC00343-211ENST00000608426 CSRNP1Q96S65 589 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms