RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 C6orf229H3BNL8 230 aa17.79■□□□□ 0.44
CTSA-219ENST00000607841 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
CTSA-219ENST00000607841 MTX1Q13505 466 aa17.79■□□□□ 0.44
CTSA-219ENST00000607841 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
CTSA-219ENST00000607841 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
CTSA-219ENST00000607841 MYH3P11055 1940 aa17.78■□□□□ 0.44
CTSA-219ENST00000607841 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
CTSA-219ENST00000607841 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
CTSA-219ENST00000607841 C20orf194Q5TEA3 1177 aa17.78■□□□□ 0.44
CTSA-219ENST00000607841 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
CTSA-219ENST00000607841 TBC1D16Q8TBP0 767 aa17.78■□□□□ 0.44
CTSA-219ENST00000607841 CACNA1SQ13698 1873 aa17.78■□□□□ 0.44
CTSA-219ENST00000607841 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 UFL1O94874 794 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 PRELPP51888 382 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 CHRNDQ07001 517 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 WASHC4Q2M389 1173 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 LARGE2Q8N3Y3 721 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 FBXO3Q9UK99 471 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
CTSA-219ENST00000607841 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
CTSA-219ENST00000607841 PTPN12Q05209 780 aaKnown RBP17.76■□□□□ 0.43
CTSA-219ENST00000607841 ZC3H12CQ9C0D7 883 aaKnown RBP17.76■□□□□ 0.43
CTSA-219ENST00000607841 POLLQ9UGP5 575 aa17.76■□□□□ 0.43
CTSA-219ENST00000607841 COL4A1P02462 1669 aa17.76■□□□□ 0.43
CTSA-219ENST00000607841 MROH5Q6ZUA9 1318 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 KCNJ4P48050 445 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 KIAA2012Q0VF49 1180 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
CTSA-219ENST00000607841 EYA2O00167 538 aa17.74■□□□□ 0.43
CTSA-219ENST00000607841 AOC3Q16853 763 aa17.74■□□□□ 0.43
CTSA-219ENST00000607841 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
CTSA-219ENST00000607841 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
CTSA-219ENST00000607841 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
CTSA-219ENST00000607841 COPRSQ9NQ92 184 aa17.74■□□□□ 0.43
CTSA-219ENST00000607841 RIPOR2Q9Y4F9 1068 aa17.74■□□□□ 0.43
CTSA-219ENST00000607841 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 TAF1P21675 1872 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 LRRC37AA6NMS7 1700 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 G3V3G9 751 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 CIAO1O76071 339 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 METTL24Q5JXM2 366 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
CTSA-219ENST00000607841 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
CTSA-219ENST00000607841 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
CTSA-219ENST00000607841 TAF5LO75529 589 aa17.72■□□□□ 0.43
CTSA-219ENST00000607841 IL15P40933 162 aaPredicted RBP17.72■□□□□ 0.43
CTSA-219ENST00000607841 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
CTSA-219ENST00000607841 RPAP2Q8IXW5 612 aaPredicted RBP17.72■□□□□ 0.43
CTSA-219ENST00000607841 HELBQ8NG08 1087 aaPredicted RBP17.72■□□□□ 0.43
CTSA-219ENST00000607841 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
CTSA-219ENST00000607841 FZD9O00144 591 aa17.71■□□□□ 0.43
CTSA-219ENST00000607841 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
CTSA-219ENST00000607841 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
CTSA-219ENST00000607841 SSH3Q8TE77 659 aa17.71■□□□□ 0.43
CTSA-219ENST00000607841 SIL1Q9H173 461 aa17.71■□□□□ 0.43
CTSA-219ENST00000607841 ZNRF3Q9ULT6 936 aa17.71■□□□□ 0.43
CTSA-219ENST00000607841 MED23Q9ULK4 1368 aa17.7■□□□□ 0.42
CTSA-219ENST00000607841 PDE8BO95263 885 aa17.7■□□□□ 0.42
CTSA-219ENST00000607841 UBE4AQ14139 1066 aa17.7■□□□□ 0.42
CTSA-219ENST00000607841 POLA2Q14181 598 aa17.7■□□□□ 0.42
CTSA-219ENST00000607841 ZNF784Q8NCA9 323 aaPredicted RBP17.7■□□□□ 0.42
CTSA-219ENST00000607841 PA2G4Q9UQ80 394 aaKnown RBP17.7■□□□□ 0.42
CTSA-219ENST00000607841 CHD4Q14839 1912 aa17.7■□□□□ 0.42
CTSA-219ENST00000607841 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
CTSA-219ENST00000607841 GLTPD2A6NH11 291 aa17.69■□□□□ 0.42
CTSA-219ENST00000607841 HMMRO75330 724 aa17.69■□□□□ 0.42
CTSA-219ENST00000607841 G3BP1Q13283 466 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTSA-219ENST00000607841 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
CTSA-219ENST00000607841 GPR101Q96P66 508 aaPredicted RBP17.69■□□□□ 0.42
CTSA-219ENST00000607841 CEP126Q9P2H0 1117 aa17.69■□□□□ 0.42
CTSA-219ENST00000607841 DUOX1Q9NRD9 1551 aa17.69■□□□□ 0.42
CTSA-219ENST00000607841 C15orf52Q6ZUT6 534 aaKnown RBP17.68■□□□□ 0.42
CTSA-219ENST00000607841 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
CTSA-219ENST00000607841 AAMPQ13685 434 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
CTSA-219ENST00000607841 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 PODNQ7Z5L7 613 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 COA1Q9GZY4 146 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
CTSA-219ENST00000607841 WTIPA6NIX2 430 aaPredicted RBP17.66■□□□□ 0.42
CTSA-219ENST00000607841 ECE2O60344 883 aa17.66■□□□□ 0.42
CTSA-219ENST00000607841 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
CTSA-219ENST00000607841 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
CTSA-219ENST00000607841 TNIP1Q15025 636 aa17.66■□□□□ 0.42
CTSA-219ENST00000607841 GPC2Q8N158 579 aa17.66■□□□□ 0.42
CTSA-219ENST00000607841 GPBP1L1Q9HC44 474 aaPredicted RBP17.66■□□□□ 0.42
CTSA-219ENST00000607841 SBF1O95248 1867 aa17.66■□□□□ 0.42
CTSA-219ENST00000607841 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
CTSA-219ENST00000607841 SNAP23O00161 211 aa17.65■□□□□ 0.42
CTSA-219ENST00000607841 HSP90AB4PQ58FF6 505 aa17.65■□□□□ 0.42
CTSA-219ENST00000607841 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
CTSA-219ENST00000607841 ZNF804AQ7Z570 1209 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms