RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 TRIM33Q9UPN9 1127 aa10.37□□□□□ -0.75
LINC00458-206ENST00000607494 ATG7O95352 703 aa10.36□□□□□ -0.75
LINC00458-206ENST00000607494 GHRHP01286 108 aa10.36□□□□□ -0.75
LINC00458-206ENST00000607494 COL13A1Q5TAT6 717 aaPredicted RBP10.36□□□□□ -0.75
LINC00458-206ENST00000607494 NLRP13Q86W25 1043 aa10.36□□□□□ -0.75
LINC00458-206ENST00000607494 UBAP1LF5GYI3 381 aa10.35□□□□□ -0.75
LINC00458-206ENST00000607494 DLL1O00548 723 aa10.35□□□□□ -0.75
LINC00458-206ENST00000607494 ALX3O95076 343 aa10.35□□□□□ -0.75
LINC00458-206ENST00000607494 SOX18P35713 384 aa10.35□□□□□ -0.75
LINC00458-206ENST00000607494 IL22RA1Q8N6P7 574 aa10.35□□□□□ -0.75
LINC00458-206ENST00000607494 ZBTB39O15060 712 aa10.34□□□□□ -0.75
LINC00458-206ENST00000607494 ZAP70P43403 619 aa10.34□□□□□ -0.75
LINC00458-206ENST00000607494 HOXD8P13378 290 aaPredicted RBP10.33□□□□□ -0.76
LINC00458-206ENST00000607494 ATP11AP98196 1134 aa10.33□□□□□ -0.76
LINC00458-206ENST00000607494 IGF2-ASQ6U949 168 aa10.33□□□□□ -0.76
LINC00458-206ENST00000607494 GPR152Q8TDT2 470 aa10.33□□□□□ -0.76
LINC00458-206ENST00000607494 COL26A1Q96A83 441 aa10.33□□□□□ -0.76
LINC00458-206ENST00000607494 ADAMTSL4Q6UY14 1074 aa10.32□□□□□ -0.76
LINC00458-206ENST00000607494 CLP1Q92989 425 aaKnown RBP10.32□□□□□ -0.76
LINC00458-206ENST00000607494 SEPT3Q9UH03 358 aa10.32□□□□□ -0.76
LINC00458-206ENST00000607494 SETDB1Q15047 1291 aa10.31□□□□□ -0.76
LINC00458-206ENST00000607494 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
LINC00458-206ENST00000607494 TXNDC11Q6PKC3 985 aa10.31□□□□□ -0.76
LINC00458-206ENST00000607494 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
LINC00458-206ENST00000607494 KRTAP4-8Q9BYQ9 185 aa10.31□□□□□ -0.76
LINC00458-206ENST00000607494 CYP2E1P05181 493 aaPredicted RBP10.3□□□□□ -0.76
LINC00458-206ENST00000607494 SCNN1AP37088 669 aa10.3□□□□□ -0.76
LINC00458-206ENST00000607494 AGGF1Q8N302 714 aaeCLIP10.3□□□□□ -0.76
LINC00458-206ENST00000607494 OR13H1Q8NG92 308 aa10.3□□□□□ -0.76
LINC00458-206ENST00000607494 RBSNQ9H1K0 784 aa10.3□□□□□ -0.76
LINC00458-206ENST00000607494 ZFP64Q9NPA5 681 aa10.3□□□□□ -0.76
LINC00458-206ENST00000607494 ARID3CA6NKF2 412 aa10.29□□□□□ -0.76
LINC00458-206ENST00000607494 ATCAYQ86WG3 371 aa10.29□□□□□ -0.76
LINC00458-206ENST00000607494 PBXIP1Q96AQ6 731 aa10.29□□□□□ -0.76
LINC00458-206ENST00000607494 CCDC97Q96F63 343 aaPredicted RBP10.29□□□□□ -0.76
LINC00458-206ENST00000607494 LACRTQ9GZZ8 138 aa10.29□□□□□ -0.76
LINC00458-206ENST00000607494 STIM2Q9P246 746 aa10.29□□□□□ -0.76
LINC00458-206ENST00000607494 PTCD1O75127 700 aaKnown RBP10.28□□□□□ -0.76
LINC00458-206ENST00000607494 PSMG3-AS1Q96PY0 264 aa10.28□□□□□ -0.76
LINC00458-206ENST00000607494 AKTIPQ9H8T0 292 aa10.28□□□□□ -0.76
LINC00458-206ENST00000607494 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
LINC00458-206ENST00000607494 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
LINC00458-206ENST00000607494 CDC25BP30305 580 aa10.27□□□□□ -0.77
LINC00458-206ENST00000607494 GALNT11Q8NCW6 608 aa10.27□□□□□ -0.77
LINC00458-206ENST00000607494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.27□□□□□ -0.77
LINC00458-206ENST00000607494 LINC01387J3KSC0 135 aa10.26□□□□□ -0.77
LINC00458-206ENST00000607494 CEP135Q66GS9 1140 aa10.26□□□□□ -0.77
LINC00458-206ENST00000607494 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
LINC00458-206ENST00000607494 RASSF4Q9H2L5 321 aa10.26□□□□□ -0.77
LINC00458-206ENST00000607494 WISP1O95388 367 aa10.25□□□□□ -0.77
LINC00458-206ENST00000607494 HYAL2Q12891 473 aa10.25□□□□□ -0.77
LINC00458-206ENST00000607494 PRR23CQ6ZRP0 262 aa10.25□□□□□ -0.77
LINC00458-206ENST00000607494 ABI2Q9NYB9 513 aaPredicted RBP10.25□□□□□ -0.77
LINC00458-206ENST00000607494 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
LINC00458-206ENST00000607494 TMEM63CQ9P1W3 806 aa10.25□□□□□ -0.77
LINC00458-206ENST00000607494 KANSL3Q9P2N6 904 aa10.25□□□□□ -0.77
LINC00458-206ENST00000607494 LRP8Q14114 963 aa10.24□□□□□ -0.77
LINC00458-206ENST00000607494 TTC39BQ5VTQ0 682 aaPredicted RBP10.24□□□□□ -0.77
LINC00458-206ENST00000607494 DZIP1LQ8IYY4 767 aaKnown RBP10.24□□□□□ -0.77
LINC00458-206ENST00000607494 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
LINC00458-206ENST00000607494 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
LINC00458-206ENST00000607494 ACPPP15309 386 aa10.23□□□□□ -0.77
LINC00458-206ENST00000607494 ABTB2Q8N961 1025 aa10.23□□□□□ -0.77
LINC00458-206ENST00000607494 KCNK4Q9NYG8 393 aa10.23□□□□□ -0.77
LINC00458-206ENST00000607494 SERPINA10Q9UK55 444 aa10.23□□□□□ -0.77
LINC00458-206ENST00000607494 PPME1Q9Y570 386 aa10.23□□□□□ -0.77
LINC00458-206ENST00000607494 HYAL3O43820 417 aaPredicted RBP10.22□□□□□ -0.77
LINC00458-206ENST00000607494 FNDC3AQ9Y2H6 1198 aaKnown RBP10.22□□□□□ -0.77
LINC00458-206ENST00000607494 A6NHS1 94 aa10.21□□□□□ -0.77
LINC00458-206ENST00000607494 KIF4AO95239 1232 aa10.21□□□□□ -0.77
LINC00458-206ENST00000607494 GLB1P16278 677 aa10.21□□□□□ -0.77
LINC00458-206ENST00000607494 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.21□□□□□ -0.77
LINC00458-206ENST00000607494 TMEM130Q8N3G9 435 aa10.21□□□□□ -0.77
LINC00458-206ENST00000607494 SPACA7Q96KW9 195 aa10.21□□□□□ -0.77
LINC00458-206ENST00000607494 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.77
LINC00458-206ENST00000607494 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
LINC00458-206ENST00000607494 TM4SF5O14894 197 aa10.2□□□□□ -0.78
LINC00458-206ENST00000607494 SMNDC1O75940 238 aaKnown RBP eCLIP10.2□□□□□ -0.78
LINC00458-206ENST00000607494 EPHA1P21709 976 aa10.2□□□□□ -0.78
LINC00458-206ENST00000607494 Q6ZS46 218 aa10.2□□□□□ -0.78
LINC00458-206ENST00000607494 EDEM1Q92611 657 aa10.2□□□□□ -0.78
LINC00458-206ENST00000607494 ELP3Q9H9T3 547 aa10.2□□□□□ -0.78
LINC00458-206ENST00000607494 SRA1Q9HD15 236 aaKnown RBP10.2□□□□□ -0.78
LINC00458-206ENST00000607494 CDC27P30260 824 aa10.19□□□□□ -0.78
LINC00458-206ENST00000607494 ZNF438Q7Z4V0 828 aa10.19□□□□□ -0.78
LINC00458-206ENST00000607494 NBPF11Q86T75 865 aa10.19□□□□□ -0.78
LINC00458-206ENST00000607494 NCAPG2Q86XI2 1143 aa10.19□□□□□ -0.78
LINC00458-206ENST00000607494 MAP4K3Q8IVH8 894 aa10.19□□□□□ -0.78
LINC00458-206ENST00000607494 UBL7Q96S82 380 aaPredicted RBP10.19□□□□□ -0.78
LINC00458-206ENST00000607494 DDX3YO15523 660 aaKnown RBP10.18□□□□□ -0.78
LINC00458-206ENST00000607494 MTMR3Q13615 1198 aa10.18□□□□□ -0.78
LINC00458-206ENST00000607494 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
LINC00458-206ENST00000607494 CEP120Q8N960 986 aa10.18□□□□□ -0.78
LINC00458-206ENST00000607494 POP1Q99575 1024 aaKnown RBP10.18□□□□□ -0.78
LINC00458-206ENST00000607494 PBX4Q9BYU1 374 aa10.18□□□□□ -0.78
LINC00458-206ENST00000607494 TRPA1O75762 1119 aa10.17□□□□□ -0.78
LINC00458-206ENST00000607494 FSTP19883 344 aa10.17□□□□□ -0.78
LINC00458-206ENST00000607494 DNM1Q05193 864 aaKnown RBP10.17□□□□□ -0.78
LINC00458-206ENST00000607494 HELQQ8TDG4 1101 aa10.17□□□□□ -0.78
LINC00458-206ENST00000607494 MUC3BQ9H195 1237 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms