RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 ZNF530Q6P9A1 599 aaPredicted RBP14.65□□□□□ -0.06
MSH6-212ENST00000607272 NYAP1Q6ZVC0 841 aa14.65□□□□□ -0.06
MSH6-212ENST00000607272 ZNF592Q92610 1267 aa14.65□□□□□ -0.06
MSH6-212ENST00000607272 RCOR1Q9UKL0 485 aa14.65□□□□□ -0.06
MSH6-212ENST00000607272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
MSH6-212ENST00000607272 RGPD8O14715 1765 aaPredicted RBP14.65□□□□□ -0.06
MSH6-212ENST00000607272 AMOTQ4VCS5 1084 aa14.65□□□□□ -0.06
MSH6-212ENST00000607272 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
MSH6-212ENST00000607272 KCND1Q9NSA2 647 aa14.65□□□□□ -0.06
MSH6-212ENST00000607272 KIF2AO00139 706 aaPredicted RBP14.64□□□□□ -0.07
MSH6-212ENST00000607272 HSP90B1P14625 803 aaKnown RBP14.64□□□□□ -0.07
MSH6-212ENST00000607272 PROSER3Q2NL68 480 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 CCDC73Q6ZRK6 1079 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 Q6ZUG5 572 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 KIF18AQ8NI77 898 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 ANO10Q9NW15 660 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 HEG1Q9ULI3 1381 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 MPRIPQ6WCQ1 1025 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 C11orf57Q6ZUT1 292 aaPredicted RBP14.64□□□□□ -0.07
MSH6-212ENST00000607272 CCAR1Q8IX12 1150 aaKnown RBP14.64□□□□□ -0.07
MSH6-212ENST00000607272 ZNF397Q8NF99 534 aaPredicted RBP14.64□□□□□ -0.07
MSH6-212ENST00000607272 SMARCC2Q8TAQ2 1214 aa14.64□□□□□ -0.07
MSH6-212ENST00000607272 MARF1Q9Y4F3 1742 aaKnown RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 RNMTO43148 476 aaKnown RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 KINO60870 393 aaKnown RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 ATP5JP18859 108 aa14.63□□□□□ -0.07
MSH6-212ENST00000607272 ADD1P35611 737 aaKnown RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 GSDMDP57764 484 aa14.63□□□□□ -0.07
MSH6-212ENST00000607272 NAA30Q147X3 362 aaPredicted RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 ZNF771Q7L3S4 317 aaPredicted RBP14.63□□□□□ -0.07
MSH6-212ENST00000607272 KCNV2Q8TDN2 545 aa14.63□□□□□ -0.07
MSH6-212ENST00000607272 DDX11Q96FC9 970 aa14.63□□□□□ -0.07
MSH6-212ENST00000607272 SIL1Q9H173 461 aa14.63□□□□□ -0.07
MSH6-212ENST00000607272 C1orf141Q5JVX7 400 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 ERO1AQ96HE7 468 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 ZNF396Q96N95 335 aaPredicted RBP14.62□□□□□ -0.07
MSH6-212ENST00000607272 NAT10Q9H0A0 1025 aaKnown RBP14.62□□□□□ -0.07
MSH6-212ENST00000607272 RFX7Q2KHR2 1363 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 NCAPD2Q15021 1401 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 CCDC69A6NI79 296 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 PFKFB2O60825 505 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 FAM160A1Q05DH4 1040 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 CEP57L1Q8IYX8 460 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 KRT222Q8N1A0 295 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 DDX21Q9NR30 783 aaKnown RBP eCLIP14.62□□□□□ -0.07
MSH6-212ENST00000607272 OVOS2A0A0G2JMS6 1433 aa14.62□□□□□ -0.07
MSH6-212ENST00000607272 CCZ1BP86790 482 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 CCZ1P86791 482 aaPredicted RBP14.61□□□□□ -0.07
MSH6-212ENST00000607272 FGD1P98174 961 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 SCRN1Q12765 414 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 SNW1Q13573 536 aaKnown RBP14.61□□□□□ -0.07
MSH6-212ENST00000607272 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 DHX40Q8IX18 779 aaKnown RBP14.61□□□□□ -0.07
MSH6-212ENST00000607272 CCAR2Q8N163 923 aaKnown RBP14.61□□□□□ -0.07
MSH6-212ENST00000607272 ZNF215Q9UL58 517 aaPredicted RBP14.61□□□□□ -0.07
MSH6-212ENST00000607272 MRC1P22897 1456 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 USP27XA6NNY8 438 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
MSH6-212ENST00000607272 ARID5BQ14865 1188 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 IMPACTQ9P2X3 320 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 USP16Q9Y5T5 823 aa14.61□□□□□ -0.07
MSH6-212ENST00000607272 CYP21A2P08686 494 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 NEXNQ0ZGT2 675 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 MCMDC2Q4G0Z9 681 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 FILIP1Q7Z7B0 1213 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 ENGASEQ8NFI3 743 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 LMO7Q8WWI1 1683 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 IGSF3O75054 1194 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 DHX8Q14562 1220 aaKnown RBP14.6□□□□□ -0.07
MSH6-212ENST00000607272 KMT5BQ4FZB7 885 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 NSUN7Q8NE18 718 aaKnown RBP14.6□□□□□ -0.07
MSH6-212ENST00000607272 GOLPH3LQ9H4A5 285 aa14.6□□□□□ -0.07
MSH6-212ENST00000607272 COL15A1P39059 1388 aa14.59□□□□□ -0.07
MSH6-212ENST00000607272 SLU7O95391 586 aaKnown RBP14.59□□□□□ -0.07
MSH6-212ENST00000607272 IGKV5-2P06315 115 aa14.59□□□□□ -0.07
MSH6-212ENST00000607272 SLFN14P0C7P3 912 aa14.59□□□□□ -0.07
MSH6-212ENST00000607272 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
MSH6-212ENST00000607272 RIC3Q7Z5B4 369 aa14.59□□□□□ -0.07
MSH6-212ENST00000607272 KCNH5Q8NCM2 988 aa14.59□□□□□ -0.07
MSH6-212ENST00000607272 EDC3Q96F86 508 aaKnown RBP14.59□□□□□ -0.07
MSH6-212ENST00000607272 OSBPL5Q9H0X9 879 aaPredicted RBP14.59□□□□□ -0.07
MSH6-212ENST00000607272 COPRSQ9NQ92 184 aa14.59□□□□□ -0.07
MSH6-212ENST00000607272 AIMP1Q12904 312 aaKnown RBP14.58□□□□□ -0.07
MSH6-212ENST00000607272 KLHDC4Q8TBB5 520 aa14.58□□□□□ -0.07
MSH6-212ENST00000607272 FAM53CQ9NYF3 392 aa14.58□□□□□ -0.07
MSH6-212ENST00000607272 TUBB4AP04350 444 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 ME1P48163 572 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 FAM193AP78312 1265 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 TERF2Q15554 542 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 TNNI3KQ59H18 835 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 USP28Q96RU2 1077 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 TRMT1Q9NXH9 659 aaKnown RBP14.58□□□□□ -0.08
MSH6-212ENST00000607272 DBNLQ9UJU6 430 aaKnown RBP14.58□□□□□ -0.08
MSH6-212ENST00000607272 FPGT-TNNI3KV9GXZ4 949 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
MSH6-212ENST00000607272 PTPDC1A2A3K4 754 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 NEURL1BA8MQ27 555 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 GCKRQ14397 625 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms