RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
LINC00240-203ENST00000606878 UFL1O94874 794 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 ATP2B4P23634 1241 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 CCT4P50991 539 aaKnown RBP20.88■□□□□ 0.93
LINC00240-203ENST00000606878 CXCL9Q07325 125 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 TNIP1Q15025 636 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 CCDC57Q2TAC2 916 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 EPHA10Q5JZY3 1008 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 SMC1BQ8NDV3 1235 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 ARHGAP45Q92619 1136 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 HACL1Q9UJ83 578 aa20.88■□□□□ 0.93
LINC00240-203ENST00000606878 G3V3G9 751 aa20.87■□□□□ 0.93
LINC00240-203ENST00000606878 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
LINC00240-203ENST00000606878 ANKRD2Q9GZV1 360 aa20.87■□□□□ 0.93
LINC00240-203ENST00000606878 USP44Q9H0E7 712 aa20.87■□□□□ 0.93
LINC00240-203ENST00000606878 CIAPIN1Q6FI81 312 aa20.86■□□□□ 0.93
LINC00240-203ENST00000606878 SUCLG2Q96I99 432 aa20.86■□□□□ 0.93
LINC00240-203ENST00000606878 TAF1DQ9H5J8 278 aaPredicted RBP20.86■□□□□ 0.93
LINC00240-203ENST00000606878 KIF16BQ96L93 1317 aa20.85■□□□□ 0.93
LINC00240-203ENST00000606878 TIAM2Q8IVF5 1701 aa20.85■□□□□ 0.93
LINC00240-203ENST00000606878 RAD17O75943 681 aa20.85■□□□□ 0.93
LINC00240-203ENST00000606878 HSPA6P17066 643 aa20.85■□□□□ 0.93
LINC00240-203ENST00000606878 LMOD1P29536 600 aaPredicted RBP20.85■□□□□ 0.93
LINC00240-203ENST00000606878 DOK7Q18PE1 504 aa20.85■□□□□ 0.93
LINC00240-203ENST00000606878 TAF7LQ5H9L4 462 aa20.85■□□□□ 0.93
LINC00240-203ENST00000606878 EPHX2P34913 555 aa20.84■□□□□ 0.93
LINC00240-203ENST00000606878 PNMA8AQ86V59 439 aaPredicted RBP20.84■□□□□ 0.93
LINC00240-203ENST00000606878 KAZALD1Q96I82 304 aa20.84■□□□□ 0.93
LINC00240-203ENST00000606878 GPR101Q96P66 508 aaPredicted RBP20.84■□□□□ 0.93
LINC00240-203ENST00000606878 DBNDD1Q9H9R9 158 aa20.84■□□□□ 0.93
LINC00240-203ENST00000606878 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
LINC00240-203ENST00000606878 BCAR3O75815 825 aa20.83■□□□□ 0.93
LINC00240-203ENST00000606878 HDAC5Q9UQL6 1122 aa20.83■□□□□ 0.93
LINC00240-203ENST00000606878 WDR90Q96KV7 1748 aa20.83■□□□□ 0.92
LINC00240-203ENST00000606878 COL4A1P02462 1669 aa20.83■□□□□ 0.92
LINC00240-203ENST00000606878 COL4A5P29400 1685 aa20.83■□□□□ 0.92
LINC00240-203ENST00000606878 YDJCA8MPS7 323 aa20.82■□□□□ 0.92
LINC00240-203ENST00000606878 ECE2O60344 883 aa20.82■□□□□ 0.92
LINC00240-203ENST00000606878 LDHAL6AQ6ZMR3 332 aa20.82■□□□□ 0.92
LINC00240-203ENST00000606878 FRAT1Q92837 279 aaPredicted RBP20.82■□□□□ 0.92
LINC00240-203ENST00000606878 BICC1Q9H694 974 aaKnown RBP20.82■□□□□ 0.92
LINC00240-203ENST00000606878 CLEC11AQ9Y240 323 aa20.82■□□□□ 0.92
LINC00240-203ENST00000606878 CHRNDQ07001 517 aa20.81■□□□□ 0.92
LINC00240-203ENST00000606878 EAPPQ56P03 285 aaPredicted RBP20.81■□□□□ 0.92
LINC00240-203ENST00000606878 CHADLQ6NUI6 762 aa20.81■□□□□ 0.92
LINC00240-203ENST00000606878 ZNF594Q96JF6 807 aaPredicted RBP20.81■□□□□ 0.92
LINC00240-203ENST00000606878 EPS15P42566 896 aa20.8■□□□□ 0.92
LINC00240-203ENST00000606878 KCNJ4P48050 445 aa20.8■□□□□ 0.92
LINC00240-203ENST00000606878 GMPSP49915 693 aaPredicted RBP20.8■□□□□ 0.92
LINC00240-203ENST00000606878 SCNN1DP51172 638 aa20.8■□□□□ 0.92
LINC00240-203ENST00000606878 RABL6Q3YEC7 729 aaPredicted RBP20.8■□□□□ 0.92
LINC00240-203ENST00000606878 LDHDQ86WU2 507 aa20.8■□□□□ 0.92
LINC00240-203ENST00000606878 CNNM1Q9NRU3 951 aa20.8■□□□□ 0.92
LINC00240-203ENST00000606878 ZNF804BA4D1E1 1349 aa20.79■□□□□ 0.92
LINC00240-203ENST00000606878 LRRC37AA6NMS7 1700 aa20.79■□□□□ 0.92
LINC00240-203ENST00000606878 WTIPA6NIX2 430 aaPredicted RBP20.79■□□□□ 0.92
LINC00240-203ENST00000606878 UBTFL1P0CB47 393 aaPredicted RBP20.79■□□□□ 0.92
LINC00240-203ENST00000606878 INTS3Q68E01 1043 aaKnown RBP20.79■□□□□ 0.92
LINC00240-203ENST00000606878 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
LINC00240-203ENST00000606878 PODNQ7Z5L7 613 aa20.79■□□□□ 0.92
LINC00240-203ENST00000606878 KCNQ5Q9NR82 932 aa20.79■□□□□ 0.92
LINC00240-203ENST00000606878 GPRC5DQ9NZD1 345 aa20.79■□□□□ 0.92
LINC00240-203ENST00000606878 MYH3P11055 1940 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 DUOX1Q9NRD9 1551 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 PSMD14O00487 310 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 POTEIP0CG38 1075 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 POTEJP0CG39 1038 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 APLP1P51693 650 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 ZKSCAN2Q63HK3 967 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 ANKRD44Q8N8A2 993 aa20.78■□□□□ 0.92
LINC00240-203ENST00000606878 HELBQ8NG08 1087 aaPredicted RBP20.78■□□□□ 0.92
LINC00240-203ENST00000606878 H7C1D1 291 aa20.77■□□□□ 0.92
LINC00240-203ENST00000606878 TAF5LO75529 589 aa20.77■□□□□ 0.92
LINC00240-203ENST00000606878 USP50Q70EL3 339 aaPredicted RBP20.77■□□□□ 0.92
LINC00240-203ENST00000606878 DPF2Q92785 391 aa20.77■□□□□ 0.92
LINC00240-203ENST00000606878 ADARB2Q9NS39 739 aaKnown RBP20.77■□□□□ 0.92
LINC00240-203ENST00000606878 CNOT7Q9UIV1 285 aaKnown RBP20.77■□□□□ 0.92
LINC00240-203ENST00000606878 PLIN1O60240 522 aa20.76■□□□□ 0.91
LINC00240-203ENST00000606878 VIL1P09327 827 aaKnown RBP20.76■□□□□ 0.91
LINC00240-203ENST00000606878 TRIM27P14373 513 aa20.76■□□□□ 0.91
LINC00240-203ENST00000606878 COA1Q9GZY4 146 aa20.76■□□□□ 0.91
LINC00240-203ENST00000606878 MED23Q9ULK4 1368 aa20.75■□□□□ 0.91
LINC00240-203ENST00000606878 RPS12P25398 132 aaKnown RBP20.75■□□□□ 0.91
LINC00240-203ENST00000606878 ZBTB12Q9Y330 459 aaPredicted RBP20.75■□□□□ 0.91
LINC00240-203ENST00000606878 SCN4AP35499 1836 aa20.74■□□□□ 0.91
LINC00240-203ENST00000606878 GNAI3P08754 354 aa20.74■□□□□ 0.91
LINC00240-203ENST00000606878 TXNRD3Q86VQ6 643 aa20.74■□□□□ 0.91
LINC00240-203ENST00000606878 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
LINC00240-203ENST00000606878 PUS3Q9BZE2 481 aaKnown RBP20.74■□□□□ 0.91
LINC00240-203ENST00000606878 USP17L3A6NCW0 530 aa20.73■□□□□ 0.91
LINC00240-203ENST00000606878 USP17L4A6NCW7 530 aa20.73■□□□□ 0.91
LINC00240-203ENST00000606878 USP17L1Q7RTZ2 530 aa20.73■□□□□ 0.91
LINC00240-203ENST00000606878 RIPOR2Q9Y4F9 1068 aa20.73■□□□□ 0.91
LINC00240-203ENST00000606878 C15orf52Q6ZUT6 534 aaKnown RBP20.72■□□□□ 0.91
LINC00240-203ENST00000606878 CNTROBQ8N137 903 aa20.72■□□□□ 0.91
LINC00240-203ENST00000606878 MEIS3Q99687 375 aa20.72■□□□□ 0.91
LINC00240-203ENST00000606878 MROH5Q6ZUA9 1318 aa20.72■□□□□ 0.91
LINC00240-203ENST00000606878 LTBP1Q14766 1721 aa20.71■□□□□ 0.91
LINC00240-203ENST00000606878 SNAP23O00161 211 aa20.71■□□□□ 0.91
LINC00240-203ENST00000606878 UBE4AQ14139 1066 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms