RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 KIDINS220Q9ULH0 1771 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 APOBRQ0VD83 1088 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 SF3A1Q15459 793 aaKnown RBP17.98■□□□□ 0.47
RER1-209ENST00000605895 PDILTQ8N807 584 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 ARAP3Q8WWN8 1544 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 DPF2Q92785 391 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
RER1-209ENST00000605895 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
RER1-209ENST00000605895 A0A0G2JLW4 131 aa17.97■□□□□ 0.47
RER1-209ENST00000605895 ZRANB2O95218 330 aaKnown RBP eCLIP17.97■□□□□ 0.473e-7■■■■□ 21
RER1-209ENST00000605895 NDUFA8P51970 172 aa17.97■□□□□ 0.47
RER1-209ENST00000605895 ETF1P62495 437 aaKnown RBP17.97■□□□□ 0.47
RER1-209ENST00000605895 RNF20Q5VTR2 975 aa17.97■□□□□ 0.47
RER1-209ENST00000605895 TBC1D8O95759 1140 aa17.97■□□□□ 0.47
RER1-209ENST00000605895 PRR36Q9H6K5 1346 aa17.97■□□□□ 0.47
RER1-209ENST00000605895 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
RER1-209ENST00000605895 DNAAF4Q8WXU2 420 aa17.96■□□□□ 0.47
RER1-209ENST00000605895 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.46
RER1-209ENST00000605895 GSDMDP57764 484 aa17.96■□□□□ 0.46
RER1-209ENST00000605895 GNG11P61952 73 aa17.96■□□□□ 0.46
RER1-209ENST00000605895 KARSQ15046 597 aaKnown RBP17.96■□□□□ 0.46
RER1-209ENST00000605895 WDR24Q96S15 920 aa17.96■□□□□ 0.46
RER1-209ENST00000605895 IRX2Q9BZI1 471 aaPredicted RBP17.96■□□□□ 0.46
RER1-209ENST00000605895 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 TFRCP02786 760 aaKnown RBP17.95■□□□□ 0.46
RER1-209ENST00000605895 SUGCTQ9HAC7 445 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 ACEP12821 1306 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 SERPINC1P01008 464 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 FAM160A1Q05DH4 1040 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 TXLNBQ8N3L3 684 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 VPS18Q9P253 973 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 PCDHA7Q9UN72 937 aa17.95■□□□□ 0.46
RER1-209ENST00000605895 H3BQF6 201 aa17.94■□□□□ 0.46
RER1-209ENST00000605895 DESI2Q9BSY9 194 aa17.94■□□□□ 0.46
RER1-209ENST00000605895 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
RER1-209ENST00000605895 EPB41L2O43491 1005 aaKnown RBP17.94■□□□□ 0.46
RER1-209ENST00000605895 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
RER1-209ENST00000605895 NAT10Q9H0A0 1025 aaKnown RBP17.94■□□□□ 0.46
RER1-209ENST00000605895 PUF60Q9UHX1 559 aaKnown RBP17.94■□□□□ 0.46
RER1-209ENST00000605895 ADAM21Q9UKJ8 722 aa17.94■□□□□ 0.46
RER1-209ENST00000605895 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
RER1-209ENST00000605895 PTPDC1A2A3K4 754 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
RER1-209ENST00000605895 TADA3O75528 432 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 CC2D1AQ6P1N0 951 aaPredicted RBP17.93■□□□□ 0.46
RER1-209ENST00000605895 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 KIF2AO00139 706 aaPredicted RBP17.93■□□□□ 0.46
RER1-209ENST00000605895 GPS2Q13227 327 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 BEND3Q5T5X7 828 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 TTLL5Q6EMB2 1281 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 PARD6BQ9BYG5 372 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 GPHNQ9NQX3 736 aaPredicted RBP17.93■□□□□ 0.46
RER1-209ENST00000605895 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
RER1-209ENST00000605895 CLIC4Q9Y696 253 aa17.93■□□□□ 0.46
RER1-209ENST00000605895 SASH1O94885 1247 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 FANCCQ00597 558 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 G3BP1Q13283 466 aaKnown RBP eCLIP17.92■□□□□ 0.46
RER1-209ENST00000605895 TRIM65Q6PJ69 517 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 REXO1L1PQ8IX06 675 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 LGR6Q9HBX8 967 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 NRDCO43847 1150 aa17.92■□□□□ 0.46
RER1-209ENST00000605895 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
RER1-209ENST00000605895 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 ENGASEQ8NFI3 743 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 OSBPL5Q9H0X9 879 aaPredicted RBP17.91■□□□□ 0.46
RER1-209ENST00000605895 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 RRP15Q9Y3B9 282 aaKnown RBP17.91■□□□□ 0.46
RER1-209ENST00000605895 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 SLC20A2Q08357 652 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 STK38Q15208 465 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 DDX46Q7L014 1031 aaKnown RBP17.91■□□□□ 0.46
RER1-209ENST00000605895 RCOR1Q9UKL0 485 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 LMTK2Q8IWU2 1503 aa17.91■□□□□ 0.46
RER1-209ENST00000605895 CAVIN2O95810 425 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 CYP21A2P08686 494 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
RER1-209ENST00000605895 UBASH3AP57075 661 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 DRC1Q96MC2 740 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 PDE11AQ9HCR9 933 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 ARFGAP3Q9NP61 516 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 ASXL2Q76L83 1435 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 CTAGE5O15320 804 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 TAF5LO75529 589 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 GTF2A1P52655 376 aaPredicted RBP17.9■□□□□ 0.46
RER1-209ENST00000605895 SART3Q15020 963 aaKnown RBP17.9■□□□□ 0.46
RER1-209ENST00000605895 KIAA1468Q9P260 1216 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 PIK3C2BO00750 1634 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 GPATCH11Q8N954 259 aa17.9■□□□□ 0.46
RER1-209ENST00000605895 CCDC150Q8NCX0 1101 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms