RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 GPR101Q96P66 508 aaPredicted RBP28.93■■■□□ 2.22
SSBP4-209ENST00000601357 PLA2G12BQ9BX93 195 aa28.93■■■□□ 2.22
SSBP4-209ENST00000601357 GREM2Q9H772 168 aa28.93■■■□□ 2.22
SSBP4-209ENST00000601357 TMEM88BA6NKF7 163 aa28.92■■■□□ 2.22
SSBP4-209ENST00000601357 CDC5LQ99459 802 aaKnown RBP28.92■■■□□ 2.22
SSBP4-209ENST00000601357 ANKIB1Q9P2G1 1089 aa28.92■■■□□ 2.22
SSBP4-209ENST00000601357 ECE2O60344 883 aa28.91■■■□□ 2.22
SSBP4-209ENST00000601357 GGA1Q9UJY5 639 aa28.91■■■□□ 2.22
SSBP4-209ENST00000601357 CNTNAP1P78357 1384 aa28.9■■■□□ 2.22
SSBP4-209ENST00000601357 SCN9AQ15858 1988 aa28.9■■■□□ 2.22
SSBP4-209ENST00000601357 UFL1O94874 794 aa28.9■■■□□ 2.22
SSBP4-209ENST00000601357 BCL2L13Q9BXK5 485 aa28.9■■■□□ 2.22
SSBP4-209ENST00000601357 XDHP47989 1333 aa28.9■■■□□ 2.22
SSBP4-209ENST00000601357 PSMD14O00487 310 aa28.89■■■□□ 2.22
SSBP4-209ENST00000601357 DOK7Q18PE1 504 aa28.89■■■□□ 2.22
SSBP4-209ENST00000601357 ZC3H12CQ9C0D7 883 aaKnown RBP28.89■■■□□ 2.22
SSBP4-209ENST00000601357 BSDC1Q9NW68 430 aaPredicted RBP28.89■■■□□ 2.22
SSBP4-209ENST00000601357 MKRN1Q9UHC7 482 aaKnown RBP28.89■■■□□ 2.22
SSBP4-209ENST00000601357 F6X3S4 739 aa28.88■■■□□ 2.21
SSBP4-209ENST00000601357 DPF2Q92785 391 aa28.88■■■□□ 2.21
SSBP4-209ENST00000601357 KCNQ5Q9NR82 932 aa28.88■■■□□ 2.21
SSBP4-209ENST00000601357 PGAP2Q9UHJ9 254 aa28.88■■■□□ 2.21
SSBP4-209ENST00000601357 CNOT7Q9UIV1 285 aaKnown RBP28.88■■■□□ 2.21
SSBP4-209ENST00000601357 CSF1RP07333 972 aa28.87■■■□□ 2.21
SSBP4-209ENST00000601357 BEND3Q5T5X7 828 aa28.87■■■□□ 2.21
SSBP4-209ENST00000601357 ZBTB12Q9Y330 459 aaPredicted RBP28.87■■■□□ 2.21
SSBP4-209ENST00000601357 PSME4Q14997 1843 aa28.87■■■□□ 2.21
SSBP4-209ENST00000601357 SHTN1A0MZ66 631 aa28.86■■■□□ 2.21
SSBP4-209ENST00000601357 HIRAP54198 1017 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-209ENST00000601357 MINPP1Q9UNW1 487 aa28.86■■■□□ 2.21
SSBP4-209ENST00000601357 TRPM7Q96QT4 1865 aa28.86■■■□□ 2.21
SSBP4-209ENST00000601357 MICALL2Q8IY33 904 aa28.85■■■□□ 2.21
SSBP4-209ENST00000601357 TRPM4Q8TD43 1214 aa28.85■■■□□ 2.21
SSBP4-209ENST00000601357 ATP2B4P23634 1241 aa28.84■■■□□ 2.21
SSBP4-209ENST00000601357 RPS12P25398 132 aaKnown RBP28.84■■■□□ 2.21
SSBP4-209ENST00000601357 FMR1Q06787 632 aaKnown RBP eCLIP28.84■■■□□ 2.21
SSBP4-209ENST00000601357 ZC3H15Q8WU90 426 aaKnown RBP28.84■■■□□ 2.21
SSBP4-209ENST00000601357 FAM161AQ3B820 660 aa28.83■■■□□ 2.21
SSBP4-209ENST00000601357 ZNF609O15014 1411 aa28.83■■■□□ 2.21
SSBP4-209ENST00000601357 WTIPA6NIX2 430 aaPredicted RBP28.82■■■□□ 2.2
SSBP4-209ENST00000601357 H7C1D1 291 aa28.82■■■□□ 2.2
SSBP4-209ENST00000601357 VIL1P09327 827 aaKnown RBP28.82■■■□□ 2.2
SSBP4-209ENST00000601357 ITGA6P23229 1130 aa28.82■■■□□ 2.2
SSBP4-209ENST00000601357 MED23Q9ULK4 1368 aa28.81■■■□□ 2.2
SSBP4-209ENST00000601357 RASSF10A6NK89 507 aa28.81■■■□□ 2.2
SSBP4-209ENST00000601357 TRAF5O00463 557 aa28.81■■■□□ 2.2
SSBP4-209ENST00000601357 E9PSI1 815 aa28.8■■■□□ 2.2
SSBP4-209ENST00000601357 FOXO4P98177 505 aa28.8■■■□□ 2.2
SSBP4-209ENST00000601357 CST9Q5W186 159 aa28.8■■■□□ 2.2
SSBP4-209ENST00000601357 HSPA1AP0DMV8 641 aaKnown RBP28.79■■■□□ 2.2
SSBP4-209ENST00000601357 HSPA1BP0DMV9 641 aaKnown RBP28.79■■■□□ 2.2
SSBP4-209ENST00000601357 IGHMBP2P38935 993 aaKnown RBP28.79■■■□□ 2.2
SSBP4-209ENST00000601357 VEGFBP49765 207 aa28.79■■■□□ 2.2
SSBP4-209ENST00000601357 CCT4P50991 539 aaKnown RBP28.79■■■□□ 2.2
SSBP4-209ENST00000601357 ZNF646O15015 1829 aaPredicted RBP28.78■■■□□ 2.2
SSBP4-209ENST00000601357 G3V3G9 751 aa28.78■■■□□ 2.2
SSBP4-209ENST00000601357 EGFRP00533 1210 aa28.78■■■□□ 2.2
SSBP4-209ENST00000601357 DCAF8Q5TAQ9 597 aa28.78■■■□□ 2.2
SSBP4-209ENST00000601357 SAMD7Q7Z3H4 446 aa28.78■■■□□ 2.2
SSBP4-209ENST00000601357 CCER2I3L3R5 266 aa28.77■■■□□ 2.2
SSBP4-209ENST00000601357 SLFN5Q08AF3 891 aa28.77■■■□□ 2.2
SSBP4-209ENST00000601357 IFFO2Q5TF58 517 aa28.77■■■□□ 2.2
SSBP4-209ENST00000601357 GLIS2Q9BZE0 524 aaPredicted RBP28.77■■■□□ 2.2
SSBP4-209ENST00000601357 A0A1B0GUL6 1792 aa28.76■■■□□ 2.19
SSBP4-209ENST00000601357 GRM8O00222 908 aa28.76■■■□□ 2.19
SSBP4-209ENST00000601357 DEFB115Q30KQ5 88 aa28.76■■■□□ 2.19
SSBP4-209ENST00000601357 PODNQ7Z5L7 613 aa28.76■■■□□ 2.19
SSBP4-209ENST00000601357 ALDH1L1O75891 902 aa28.75■■■□□ 2.19
SSBP4-209ENST00000601357 TBC1D10BQ4KMP7 808 aaPredicted RBP28.75■■■□□ 2.19
SSBP4-209ENST00000601357 MRPL50Q8N5N7 158 aaKnown RBP28.75■■■□□ 2.19
SSBP4-209ENST00000601357 ABT1Q9ULW3 272 aaKnown RBP28.75■■■□□ 2.19
SSBP4-209ENST00000601357 LEMD3Q9Y2U8 911 aa28.75■■■□□ 2.19
SSBP4-209ENST00000601357 ANKRD18BA2A2Z9 1011 aa28.74■■■□□ 2.19
SSBP4-209ENST00000601357 RSBN1LQ6PCB5 846 aaPredicted RBP28.74■■■□□ 2.19
SSBP4-209ENST00000601357 CDC37L1Q7L3B6 337 aa28.74■■■□□ 2.19
SSBP4-209ENST00000601357 AGBL3Q8NEM8 1001 aa28.74■■■□□ 2.19
SSBP4-209ENST00000601357 MPHOSPH8Q99549 860 aa28.74■■■□□ 2.19
SSBP4-209ENST00000601357 ANKRD2Q9GZV1 360 aa28.74■■■□□ 2.19
SSBP4-209ENST00000601357 THSD7BQ9C0I4 1608 aa28.73■■■□□ 2.19
SSBP4-209ENST00000601357 EPHA10Q5JZY3 1008 aa28.73■■■□□ 2.19
SSBP4-209ENST00000601357 SLC4A10Q6U841 1118 aa28.73■■■□□ 2.19
SSBP4-209ENST00000601357 GMLQ99445 158 aa28.73■■■□□ 2.19
SSBP4-209ENST00000601357 SRCIN1Q9C0H9 1055 aa28.73■■■□□ 2.19
SSBP4-209ENST00000601357 TXNRD3Q86VQ6 643 aa28.72■■■□□ 2.19
SSBP4-209ENST00000601357 TLL2Q9Y6L7 1015 aa28.72■■■□□ 2.19
SSBP4-209ENST00000601357 ZNF804BA4D1E1 1349 aa28.71■■■□□ 2.19
SSBP4-209ENST00000601357 USP17L3A6NCW0 530 aa28.71■■■□□ 2.19
SSBP4-209ENST00000601357 USP17L4A6NCW7 530 aa28.71■■■□□ 2.19
SSBP4-209ENST00000601357 ZNF280AP59817 542 aaPredicted RBP28.71■■■□□ 2.19
SSBP4-209ENST00000601357 IFIT5Q13325 482 aaKnown RBP28.71■■■□□ 2.19
SSBP4-209ENST00000601357 LMBR1LQ6UX01 489 aa28.71■■■□□ 2.19
SSBP4-209ENST00000601357 USP17L1Q7RTZ2 530 aa28.71■■■□□ 2.19
SSBP4-209ENST00000601357 TRMT2AQ8IZ69 625 aaKnown RBP28.71■■■□□ 2.19
SSBP4-209ENST00000601357 CDCA7LQ96GN5 454 aa28.71■■■□□ 2.19
SSBP4-209ENST00000601357 CHRNDQ07001 517 aa28.7■■■□□ 2.18
SSBP4-209ENST00000601357 KIF4BQ2VIQ3 1234 aa28.7■■■□□ 2.18
SSBP4-209ENST00000601357 COL13A1Q5TAT6 717 aaPredicted RBP28.7■■■□□ 2.18
SSBP4-209ENST00000601357 COA1Q9GZY4 146 aa28.7■■■□□ 2.18
SSBP4-209ENST00000601357 C9orf78Q9NZ63 289 aaPredicted RBP28.7■■■□□ 2.18
SSBP4-209ENST00000601357 PTPRCP08575 1304 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms