RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 ZC3H12CQ9C0D7 883 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-233ENST00000600778 PODXL2Q9NZ53 605 aa14.79□□□□□ -0.04
SOX2-OT-233ENST00000600778 G3V3G9 751 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 PSMD14O00487 310 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 ECE2O60344 883 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 UFL1O94874 794 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 FMR1Q06787 632 aaKnown RBP eCLIP14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 GCKRQ14397 625 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 UBE3BQ7Z3V4 1068 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 CDC5LQ99459 802 aaKnown RBP14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 GREM2Q9H772 168 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 CNOT7Q9UIV1 285 aaKnown RBP14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 GGA1Q9UJY5 639 aa14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
SOX2-OT-233ENST00000600778 CNTNAP1P78357 1384 aa14.77□□□□□ -0.04
SOX2-OT-233ENST00000600778 SHTN1A0MZ66 631 aa14.77□□□□□ -0.05
SOX2-OT-233ENST00000600778 MIER1Q8N108 512 aa14.77□□□□□ -0.05
SOX2-OT-233ENST00000600778 F6X3S4 739 aa14.76□□□□□ -0.05
SOX2-OT-233ENST00000600778 H7C1D1 291 aa14.76□□□□□ -0.05
SOX2-OT-233ENST00000600778 HSPA1AP0DMV8 641 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-233ENST00000600778 HSPA1BP0DMV9 641 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-233ENST00000600778 IFFO2Q5TF58 517 aa14.76□□□□□ -0.05
SOX2-OT-233ENST00000600778 LINS1Q8NG48 757 aa14.76□□□□□ -0.05
SOX2-OT-233ENST00000600778 XDHP47989 1333 aa14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 TRAF5O00463 557 aa14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 ATP2B4P23634 1241 aa14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 HIRAP54198 1017 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 CASP7P55210 303 aa14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 MICALL2Q8IY33 904 aa14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 TRPM4Q8TD43 1214 aa14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 BSDC1Q9NW68 430 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-233ENST00000600778 VEGFBP49765 207 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 DEFB115Q30KQ5 88 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 DPF2Q92785 391 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 PLA2G12BQ9BX93 195 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 ABT1Q9ULW3 272 aaKnown RBP14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 MINPP1Q9UNW1 487 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 CACNA1FO60840 1977 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 MYH3P11055 1940 aa14.74□□□□□ -0.05
SOX2-OT-233ENST00000600778 RTL9Q8NET4 1388 aa14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 ZNF521Q96K83 1311 aa14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 WTIPA6NIX2 430 aaPredicted RBP14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 ITGA6P23229 1130 aa14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 IGHMBP2P38935 993 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 BEND3Q5T5X7 828 aa14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 SAMD7Q7Z3H4 446 aa14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 GLIS2Q9BZE0 524 aaPredicted RBP14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 PGAP2Q9UHJ9 254 aa14.73□□□□□ -0.05
SOX2-OT-233ENST00000600778 SPEF2Q9C093 1822 aa14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 RASSF10A6NK89 507 aa14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 CSF1RP07333 972 aa14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 VIL1P09327 827 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 RPS12P25398 132 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 FAM161AQ3B820 660 aa14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 TBC1D10BQ4KMP7 808 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 RBM26Q5T8P6 1007 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 COL13A1Q5TAT6 717 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 CST9Q5W186 159 aa14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 ZC3H15Q8WU90 426 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-233ENST00000600778 CCT4P50991 539 aaKnown RBP14.71□□□□□ -0.05
SOX2-OT-233ENST00000600778 SLC4A10Q6U841 1118 aa14.71□□□□□ -0.05
SOX2-OT-233ENST00000600778 MPHOSPH8Q99549 860 aa14.71□□□□□ -0.05
SOX2-OT-233ENST00000600778 CELF2O95319 508 aaKnown RBP14.7□□□□□ -0.06
SOX2-OT-233ENST00000600778 EGFRP00533 1210 aa14.7□□□□□ -0.06
SOX2-OT-233ENST00000600778 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
SOX2-OT-233ENST00000600778 CDC37L1Q7L3B6 337 aa14.7□□□□□ -0.06
SOX2-OT-233ENST00000600778 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
SOX2-OT-233ENST00000600778 WDR33Q9C0J8 1336 aaKnown RBP14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 ANKRD18BA2A2Z9 1011 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 E9PSI1 815 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 FOXO4P98177 505 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 RSBN1LQ6PCB5 846 aaPredicted RBP14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 PAXIP1Q6ZW49 1069 aaPredicted RBP14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 PODNQ7Z5L7 613 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 USP48Q86UV5 1035 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 ZNF408Q9H9D4 720 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 LEMD3Q9Y2U8 911 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 TRPM7Q96QT4 1865 aa14.69□□□□□ -0.06
SOX2-OT-233ENST00000600778 USP17L3A6NCW0 530 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 GRM8O00222 908 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 GRM1Q13255 1194 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 CYP4F22Q6NT55 531 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 DLK2Q6UY11 383 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 ANKRD2Q9GZV1 360 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 C9orf78Q9NZ63 289 aaPredicted RBP14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 TLL2Q9Y6L7 1015 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 MED23Q9ULK4 1368 aa14.68□□□□□ -0.06
SOX2-OT-233ENST00000600778 ZNF804BA4D1E1 1349 aa14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 FOXN1O15353 648 aa14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 CHRNDQ07001 517 aa14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 SLFN5Q08AF3 891 aa14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 IFIT5Q13325 482 aaKnown RBP14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 KIF4BQ2VIQ3 1234 aa14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 EPHA10Q5JZY3 1008 aa14.67□□□□□ -0.06
SOX2-OT-233ENST00000600778 LMBR1LQ6UX01 489 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms