RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
SRRM1-223ENST00000600523 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
SRRM1-223ENST00000600523 LRRFIP2Q9Y608 721 aaKnown RBP16.25■□□□□ 0.19
SRRM1-223ENST00000600523 GPSM2P81274 684 aa16.24■□□□□ 0.19
SRRM1-223ENST00000600523 KAZALD1Q96I82 304 aa16.24■□□□□ 0.19
SRRM1-223ENST00000600523 ZC3H12CQ9C0D7 883 aaKnown RBP16.24■□□□□ 0.19
SRRM1-223ENST00000600523 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
SRRM1-223ENST00000600523 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
SRRM1-223ENST00000600523 EIF6P56537 245 aaKnown RBP16.23■□□□□ 0.19
SRRM1-223ENST00000600523 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
SRRM1-223ENST00000600523 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
SRRM1-223ENST00000600523 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
SRRM1-223ENST00000600523 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
SRRM1-223ENST00000600523 LEMD3Q9Y2U8 911 aa16.23■□□□□ 0.19
SRRM1-223ENST00000600523 KIAA2012Q0VF49 1180 aa16.22■□□□□ 0.19
SRRM1-223ENST00000600523 AOC3Q16853 763 aa16.22■□□□□ 0.19
SRRM1-223ENST00000600523 TBC1D16Q8TBP0 767 aa16.22■□□□□ 0.19
SRRM1-223ENST00000600523 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
SRRM1-223ENST00000600523 TAF1P21675 1872 aa16.22■□□□□ 0.19
SRRM1-223ENST00000600523 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
SRRM1-223ENST00000600523 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
SRRM1-223ENST00000600523 SBF1O95248 1867 aa16.21■□□□□ 0.19
SRRM1-223ENST00000600523 PLIN1O60240 522 aa16.21■□□□□ 0.19
SRRM1-223ENST00000600523 ZNF784Q8NCA9 323 aaPredicted RBP16.21■□□□□ 0.19
SRRM1-223ENST00000600523 ZNF526Q8TF50 670 aaPredicted RBP16.21■□□□□ 0.19
SRRM1-223ENST00000600523 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
SRRM1-223ENST00000600523 MROH5Q6ZUA9 1318 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 UTRNP46939 3433 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 RIMBP2O15034 1052 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 RLBP1P12271 317 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 CHRNDQ07001 517 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
SRRM1-223ENST00000600523 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 ZNRF3Q9ULT6 936 aa16.2■□□□□ 0.18
SRRM1-223ENST00000600523 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
SRRM1-223ENST00000600523 PRELPP51888 382 aa16.19■□□□□ 0.18
SRRM1-223ENST00000600523 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
SRRM1-223ENST00000600523 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
SRRM1-223ENST00000600523 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
SRRM1-223ENST00000600523 FZD9O00144 591 aa16.18■□□□□ 0.18
SRRM1-223ENST00000600523 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
SRRM1-223ENST00000600523 CCDC88AQ3V6T2 1871 aa16.18■□□□□ 0.18
SRRM1-223ENST00000600523 TIAM2Q8IVF5 1701 aa16.17■□□□□ 0.18
SRRM1-223ENST00000600523 MTX1Q13505 466 aa16.17■□□□□ 0.18
SRRM1-223ENST00000600523 TNIP1Q15025 636 aa16.17■□□□□ 0.18
SRRM1-223ENST00000600523 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
SRRM1-223ENST00000600523 C16orf71Q8IYS4 520 aaPredicted RBP16.17■□□□□ 0.18
SRRM1-223ENST00000600523 DICER1Q9UPY3 1922 aaKnown RBP16.17■□□□□ 0.18
SRRM1-223ENST00000600523 SPEF2Q9C093 1822 aa16.17■□□□□ 0.18
SRRM1-223ENST00000600523 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
SRRM1-223ENST00000600523 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
SRRM1-223ENST00000600523 EYA2O00167 538 aa16.16■□□□□ 0.18
SRRM1-223ENST00000600523 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
SRRM1-223ENST00000600523 GPC2Q8N158 579 aa16.16■□□□□ 0.18
SRRM1-223ENST00000600523 HELBQ8NG08 1087 aaPredicted RBP16.16■□□□□ 0.18
SRRM1-223ENST00000600523 GJA3Q9Y6H8 435 aa16.16■□□□□ 0.18
SRRM1-223ENST00000600523 COL4A1P02462 1669 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 ECE2O60344 883 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 TAF5LO75529 589 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 CIAO1O76071 339 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 VEGFAP15692 232 aaPredicted RBP16.15■□□□□ 0.18
SRRM1-223ENST00000600523 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
SRRM1-223ENST00000600523 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
SRRM1-223ENST00000600523 PTPN12Q05209 780 aaKnown RBP16.15■□□□□ 0.18
SRRM1-223ENST00000600523 UBE4AQ14139 1066 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 DOK7Q18PE1 504 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 CIAPIN1Q6FI81 312 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 SIL1Q9H173 461 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 COPRSQ9NQ92 184 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 CEP126Q9P2H0 1117 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 RIPOR2Q9Y4F9 1068 aa16.15■□□□□ 0.18
SRRM1-223ENST00000600523 HMMRO75330 724 aa16.14■□□□□ 0.17
SRRM1-223ENST00000600523 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.17
SRRM1-223ENST00000600523 ZNF804AQ7Z570 1209 aa16.14■□□□□ 0.17
SRRM1-223ENST00000600523 VPS37DQ86XT2 251 aa16.14■□□□□ 0.17
SRRM1-223ENST00000600523 GPR101Q96P66 508 aaPredicted RBP16.14■□□□□ 0.17
SRRM1-223ENST00000600523 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
SRRM1-223ENST00000600523 COA1Q9GZY4 146 aa16.14■□□□□ 0.17
SRRM1-223ENST00000600523 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 DDNO94850 711 aaPredicted RBP16.13■□□□□ 0.17
SRRM1-223ENST00000600523 PDE8BO95263 885 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 IFIT1P09914 478 aaKnown RBP16.13■□□□□ 0.17
SRRM1-223ENST00000600523 RFX5P48382 616 aaPredicted RBP16.13■□□□□ 0.17
SRRM1-223ENST00000600523 ATP8B2P98198 1209 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
SRRM1-223ENST00000600523 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
SRRM1-223ENST00000600523 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 CAVIN4Q5BKX8 364 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 ZNF541Q9H0D2 1346 aa16.13■□□□□ 0.17
SRRM1-223ENST00000600523 LTBP1Q14766 1721 aa16.12■□□□□ 0.17
SRRM1-223ENST00000600523 SLC5A1P13866 664 aa16.12■□□□□ 0.17
SRRM1-223ENST00000600523 CXCL9Q07325 125 aa16.12■□□□□ 0.17
SRRM1-223ENST00000600523 C15orf52Q6ZUT6 534 aaKnown RBP16.12■□□□□ 0.17
SRRM1-223ENST00000600523 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms