RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 RPGRIP1LQ68CZ1 1315 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 EZRP15311 586 aaKnown RBP11.33□□□□□ -0.6
NFKB1-212ENST00000600343 PDE6BP35913 854 aa11.33□□□□□ -0.6
NFKB1-212ENST00000600343 YTHDC2Q9H6S0 1430 aaKnown RBP11.33□□□□□ -0.6
NFKB1-212ENST00000600343 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 GJB2P29033 226 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 PSME1Q06323 249 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 STX1AQ16623 288 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 CRACR2AQ9BSW2 395 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 NAT10Q9H0A0 1025 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 PPRC1Q5VV67 1664 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 NR1I2O75469 434 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 U2AF1L5P0DN76 240 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 CHGAP10645 457 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 GBP2P32456 591 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 GNG11P61952 73 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 U2AF1Q01081 240 aaKnown RBP eCLIP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 ENO4A6NNW6 628 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 PPFIA2O75334 1257 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 CHMLP26374 656 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 PRPHP41219 470 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 FNTAP49354 379 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 C3orf20Q8ND61 904 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 IFIT2P09913 472 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 USP5P45974 858 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 SF3A1Q15459 793 aaKnown RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-212ENST00000600343 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 MYO6Q9UM54 1294 aa11.32□□□□□ -0.6
NFKB1-212ENST00000600343 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 FSBPO95073 299 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 SETSIPP0DME0 302 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 RAB27AP51159 221 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 ARMCX6Q7L4S7 300 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 ADGRL2O95490 1459 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 CDR1P51861 262 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 DTNBO60941 627 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
NFKB1-212ENST00000600343 DDX20Q9UHI6 824 aaKnown RBP11.31□□□□□ -0.6
NFKB1-212ENST00000600343 NUP160Q12769 1436 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 ECEL1O95672 775 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 ABCD1P33897 745 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 ANKZF1Q9H8Y5 726 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 MYOM2P54296 1465 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 PYGLP06737 847 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 DHX40Q8IX18 779 aaKnown RBP11.3□□□□□ -0.6
NFKB1-212ENST00000600343 AOPEPQ8N6M6 819 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 PNKPQ96T60 521 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 CARD14Q9BXL6 1004 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 STK31Q9BXU1 1019 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-212ENST00000600343 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-212ENST00000600343 DNAJC14Q6Y2X3 702 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-212ENST00000600343 DHX58Q96C10 678 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 CCDC97Q96F63 343 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-212ENST00000600343 WDR24Q96S15 920 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 SCAND2PQ9GZW5 306 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-212ENST00000600343 RAB21Q9UL25 225 aa11.3□□□□□ -0.6
NFKB1-212ENST00000600343 SLC8A3P57103 927 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 SAMM50Q9Y512 469 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
NFKB1-212ENST00000600343 FAM163BP0C2L3 166 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 AK2P54819 239 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 KCNB1Q14721 858 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-212ENST00000600343 CCDC83Q8IWF9 413 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 IGSF22Q8N9C0 903 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 KAT14Q9H8E8 782 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 G3BP2Q9UN86 482 aaKnown RBP11.29□□□□□ -0.6
NFKB1-212ENST00000600343 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 MYOM1P52179 1685 aa11.29□□□□□ -0.6
NFKB1-212ENST00000600343 SHOX2O60902 331 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-212ENST00000600343 IRAK1P51617 712 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 MYSM1Q5VVJ2 828 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 CEP57L1Q8IYX8 460 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 LMBR1Q8WVP7 490 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms