RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 HOXB7P09629 217 aa22.66■■□□□ 1.22
ARHGEF1-218ENST00000599589 IRX5P78411 483 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF1-218ENST00000599589 RNF20Q5VTR2 975 aa22.66■■□□□ 1.22
ARHGEF1-218ENST00000599589 CHPF2Q9P2E5 772 aa22.66■■□□□ 1.22
ARHGEF1-218ENST00000599589 GIGYF1O75420 1035 aaPredicted RBP22.65■■□□□ 1.22
ARHGEF1-218ENST00000599589 MPRIPQ6WCQ1 1025 aa22.65■■□□□ 1.22
ARHGEF1-218ENST00000599589 TIGD1Q96MW7 591 aa22.65■■□□□ 1.22
ARHGEF1-218ENST00000599589 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
ARHGEF1-218ENST00000599589 ANXA1P04083 346 aa22.64■■□□□ 1.22
ARHGEF1-218ENST00000599589 DHX40Q8IX18 779 aaKnown RBP22.64■■□□□ 1.22
ARHGEF1-218ENST00000599589 ALDH8A1Q9H2A2 487 aaPredicted RBP22.64■■□□□ 1.22
ARHGEF1-218ENST00000599589 BTBD11A6QL63 1104 aa22.64■■□□□ 1.21
ARHGEF1-218ENST00000599589 H3BQV1 296 aa22.64■■□□□ 1.21
ARHGEF1-218ENST00000599589 HIP1O00291 1037 aa22.64■■□□□ 1.21
ARHGEF1-218ENST00000599589 IFFO2Q5TF58 517 aa22.64■■□□□ 1.21
ARHGEF1-218ENST00000599589 RNMTO43148 476 aaKnown RBP22.63■■□□□ 1.21
ARHGEF1-218ENST00000599589 ZC3H6P61129 1189 aaKnown RBP22.63■■□□□ 1.21
ARHGEF1-218ENST00000599589 CADPS2Q86UW7 1296 aa22.63■■□□□ 1.21
ARHGEF1-218ENST00000599589 CCAR1Q8IX12 1150 aaKnown RBP22.63■■□□□ 1.21
ARHGEF1-218ENST00000599589 CFAP45Q9UL16 551 aa22.63■■□□□ 1.21
ARHGEF1-218ENST00000599589 ERCC6LQ2NKX8 1250 aa22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 GTF3C6Q969F1 213 aa22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 GOLPH3LQ9H4A5 285 aa22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 ALS2Q96Q42 1657 aa22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 MTX1Q13505 466 aa22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 CCDC8Q9H0W5 538 aaPredicted RBP22.62■■□□□ 1.21
ARHGEF1-218ENST00000599589 CTAGE5O15320 804 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 LRRN4CLQ8ND94 238 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 FSD1Q9BTV5 496 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 FTOQ9C0B1 505 aaKnown RBP eCLIP22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 OVOS2A0A0G2JMS6 1433 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 VGLL3A8MV65 326 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 CDK11BP21127 795 aaKnown RBP22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 SNW1Q13573 536 aaKnown RBP22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 FBXW7Q969H0 707 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 SYTL4Q96C24 671 aaPredicted RBP22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 SNRKQ9NRH2 765 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 ZNF589Q86UQ0 364 aaPredicted RBP22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 NOL10Q9BSC4 688 aaKnown RBP22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 KCND1Q9NSA2 647 aa22.61■■□□□ 1.21
ARHGEF1-218ENST00000599589 CAMTA1Q9Y6Y1 1673 aa22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 H2AFXP16104 143 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 BMS1Q14692 1282 aaKnown RBP22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 AOPEPQ8N6M6 819 aa22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 ERCC4Q92889 916 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 BOLA2Q9H3K6 86 aa22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 ZSCAN16Q9H4T2 348 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 KIF2AO00139 706 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 KCNQ3O43525 872 aa22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 FOSBP53539 338 aa22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 EAF2Q96CJ1 260 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 CALCOCO1Q9P1Z2 691 aa22.6■■□□□ 1.21
ARHGEF1-218ENST00000599589 STRCP1A6NGW2 1772 aa22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 KDM3BQ7LBC6 1761 aa22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 DDX17Q92841 729 aaKnown RBP22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 TLR7Q9NYK1 1049 aaKnown RBP22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 C9orf78Q9NZ63 289 aaPredicted RBP22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 PXDNQ92626 1479 aa22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 HSP90B1P14625 803 aaKnown RBP22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 NBPF11Q86T75 865 aa22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 ANO10Q9NW15 660 aa22.59■■□□□ 1.21
ARHGEF1-218ENST00000599589 MED23Q9ULK4 1368 aa22.58■■□□□ 1.21
ARHGEF1-218ENST00000599589 ADD1P35611 737 aaKnown RBP22.58■■□□□ 1.21
ARHGEF1-218ENST00000599589 E4F1Q66K89 784 aaPredicted RBP22.58■■□□□ 1.21
ARHGEF1-218ENST00000599589 L2HGDHQ9H9P8 463 aa22.58■■□□□ 1.21
ARHGEF1-218ENST00000599589 GSDMDP57764 484 aa22.58■■□□□ 1.2
ARHGEF1-218ENST00000599589 SYT10Q6XYQ8 523 aa22.58■■□□□ 1.2
ARHGEF1-218ENST00000599589 CCDC73Q6ZRK6 1079 aa22.58■■□□□ 1.2
ARHGEF1-218ENST00000599589 HMG20BQ9P0W2 317 aa22.58■■□□□ 1.2
ARHGEF1-218ENST00000599589 FHOD1Q9Y613 1164 aa22.58■■□□□ 1.2
ARHGEF1-218ENST00000599589 MYH15Q9Y2K3 1946 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 SASH1O94885 1247 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 CLCN6P51797 869 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 PPP1R13BQ96KQ4 1090 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 KINO60870 393 aaKnown RBP22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 HSPA2P54652 639 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 FAM193AP78312 1265 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 Q6ZUG5 572 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 CEP57L1Q8IYX8 460 aa22.57■■□□□ 1.2
ARHGEF1-218ENST00000599589 TSGA10IPQ3SY00 556 aa22.56■■□□□ 1.2
ARHGEF1-218ENST00000599589 RCOR1Q9UKL0 485 aa22.56■■□□□ 1.2
ARHGEF1-218ENST00000599589 CYP2C19P33261 490 aa22.56■■□□□ 1.2
ARHGEF1-218ENST00000599589 RAPGEF4Q8WZA2 1011 aa22.56■■□□□ 1.2
ARHGEF1-218ENST00000599589 OSBPL5Q9H0X9 879 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF1-218ENST00000599589 CCDC93Q567U6 631 aa22.55■■□□□ 1.2
ARHGEF1-218ENST00000599589 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
ARHGEF1-218ENST00000599589 NLRP2Q9NX02 1062 aa22.55■■□□□ 1.2
ARHGEF1-218ENST00000599589 TAF5LO75529 589 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 CREBRFQ8IUR6 639 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 ENGASEQ8NFI3 743 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 LMTK3Q96Q04 1460 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 USP28Q96RU2 1077 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 SCRN1Q12765 414 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 LRRC2Q9BYS8 371 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
ARHGEF1-218ENST00000599589 PNMA6AP0CW24 399 aaPredicted RBP22.53■■□□□ 1.2
ARHGEF1-218ENST00000599589 FAM160A1Q05DH4 1040 aa22.53■■□□□ 1.2
ARHGEF1-218ENST00000599589 G3BP1Q13283 466 aaKnown RBP eCLIP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms