RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 CAPN2P17655 700 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 VPS18Q9P253 973 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 LDHCP07864 332 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 PLVAPQ9BX97 442 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 CRNKL1Q9BZJ0 848 aaKnown RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 MRPS9P82933 396 aaKnown RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 NUCB1Q02818 461 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 RTN1Q16799 776 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 GOLGA1Q92805 767 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 XRCC6P12956 609 aaKnown RBP eCLIP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 CEP57Q86XR8 500 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 ERMNQ8TAM6 284 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 PIK3R4Q99570 1358 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
SCN8A-208ENST00000599343 CCDC129Q6ZRS4 1044 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 DDX12PQ92771 950 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
SCN8A-208ENST00000599343 ZBTB16Q05516 673 aa13.46□□□□□ -0.26
SCN8A-208ENST00000599343 CCDC121Q6ZUS5 278 aa13.46□□□□□ -0.26
SCN8A-208ENST00000599343 GRIN2BQ13224 1484 aa13.46□□□□□ -0.26
SCN8A-208ENST00000599343 WDHD1O75717 1129 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-208ENST00000599343 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
SCN8A-208ENST00000599343 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 RHOXF2BP0C7M4 288 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 DPH6Q7L8W6 267 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 CCDC50Q8IVM0 306 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 RAB3IL1Q8TBN0 382 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 RHOXF2Q9BQY4 288 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 CYP7A1P22680 504 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 PSMC4P43686 418 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 STX17P56962 302 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 DAAM2Q86T65 1068 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 IFT81Q8WYA0 676 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 LZTFL1Q9NQ48 299 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 ZEB2O60315 1214 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 F13A1P00488 732 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 KRT23Q9C075 422 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 SBNO2Q9Y2G9 1366 aa13.45□□□□□ -0.26
SCN8A-208ENST00000599343 TROQ12816 1431 aaPredicted RBP13.45□□□□□ -0.26
SCN8A-208ENST00000599343 ANKS4BQ8N8V4 417 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 CCDC77Q9BR77 488 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 SUPT6HQ7KZ85 1726 aaKnown RBP13.44□□□□□ -0.26
SCN8A-208ENST00000599343 FOXO3O43524 673 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 CA8P35219 290 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 PSMA7O14818 248 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 IGSF3O75054 1194 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
SCN8A-208ENST00000599343 MEIS3Q99687 375 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
SCN8A-208ENST00000599343 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 SMC6Q96SB8 1091 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
SCN8A-208ENST00000599343 CALM1P0DP23 149 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 CALM2P0DP24 149 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 CALM3P0DP25 149 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 UBXN1Q04323 297 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 DHX29Q7Z478 1369 aaKnown RBP13.43□□□□□ -0.26
SCN8A-208ENST00000599343 CLCN1P35523 988 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 SPAG1Q07617 926 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 UQCRFS1P1P0C7P4 283 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 NAPAP54920 295 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 TYRO3Q06418 890 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 KIF5AQ12840 1032 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 SYT10Q6XYQ8 523 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 CHST3Q7LGC8 479 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 CCDC25Q86WR0 208 aa13.43□□□□□ -0.26
SCN8A-208ENST00000599343 STMN4Q9H169 189 aaPredicted RBP13.43□□□□□ -0.26
SCN8A-208ENST00000599343 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCN8A-208ENST00000599343 CFAP57Q96MR6 1250 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 TLDC2A0PJX2 215 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
SCN8A-208ENST00000599343 PICALMQ13492 652 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 KCNK9Q9NPC2 374 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 ZKSCAN5Q9Y2L8 839 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 NDC80O14777 642 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 KRT83P78385 493 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
SCN8A-208ENST00000599343 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 BMP15O95972 392 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 PDE1AP54750 535 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 ESR2Q92731 530 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 PPP1R9BQ96SB3 815 aa13.42□□□□□ -0.26
SCN8A-208ENST00000599343 KRT86O43790 486 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 PRPHP41219 470 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 MCMDC2Q4G0Z9 681 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms