RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	MAP2K1	Q02750	393 aa	Predicted RBP	18.99	■□□□□ 0.63
IRF3-223	ENST00000599223	ZNF408	Q9H9D4	720 aa		18.99	■□□□□ 0.63
IRF3-223	ENST00000599223	ECE1	P42892	770 aa		18.98	■□□□□ 0.63
IRF3-223	ENST00000599223	ZC3H15	Q8WU90	426 aa	Known RBP	18.98	■□□□□ 0.63
IRF3-223	ENST00000599223	TSR2	Q969E8	191 aa	Known RBP	18.98	■□□□□ 0.63
IRF3-223	ENST00000599223	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.98	■□□□□ 0.63
IRF3-223	ENST00000599223	PCCA	P05165	728 aa	Predicted RBP	18.97	■□□□□ 0.63
IRF3-223	ENST00000599223	CALD1	Q05682	793 aa	Known RBP	18.97	■□□□□ 0.63
IRF3-223	ENST00000599223	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.97	■□□□□ 0.63
IRF3-223	ENST00000599223	CCDC191	Q8NCU4	936 aa		18.97	■□□□□ 0.63
IRF3-223	ENST00000599223	TSKS	Q9UJT2	592 aa		18.97	■□□□□ 0.63
IRF3-223	ENST00000599223		H7C1D1	291 aa		18.96	■□□□□ 0.63
IRF3-223	ENST00000599223	UFL1	O94874	794 aa		18.96	■□□□□ 0.63
IRF3-223	ENST00000599223	DPF2	Q92785	391 aa		18.96	■□□□□ 0.63
IRF3-223	ENST00000599223	METTL22	Q9BUU2	404 aa	Predicted RBP	18.96	■□□□□ 0.63
IRF3-223	ENST00000599223	CWC25	Q9NXE8	425 aa	Predicted RBP	18.96	■□□□□ 0.63
IRF3-223	ENST00000599223	PODXL2	Q9NZ53	605 aa		18.96	■□□□□ 0.63
IRF3-223	ENST00000599223	CDC37L1	Q7L3B6	337 aa		18.95	■□□□□ 0.62
IRF3-223	ENST00000599223	USP48	Q86UV5	1035 aa		18.95	■□□□□ 0.62
IRF3-223	ENST00000599223	EYA3	Q99504	573 aa		18.95	■□□□□ 0.62
IRF3-223	ENST00000599223	MAP3K2	Q9Y2U5	619 aa		18.95	■□□□□ 0.62
IRF3-223	ENST00000599223	ASTN2	O75129	1339 aa	Predicted RBP	18.95	■□□□□ 0.62
IRF3-223	ENST00000599223	ZNF609	O15014	1411 aa		18.94	■□□□□ 0.62
IRF3-223	ENST00000599223	ADM5	C9JUS6	153 aa		18.94	■□□□□ 0.62
IRF3-223	ENST00000599223	PDE8A	O60658	829 aa		18.94	■□□□□ 0.62
IRF3-223	ENST00000599223	IGKV5-2	P06315	115 aa		18.94	■□□□□ 0.62
IRF3-223	ENST00000599223	CCDC152	Q4G0S7	254 aa		18.94	■□□□□ 0.62
IRF3-223	ENST00000599223	CCDC30	Q5VVM6	783 aa		18.94	■□□□□ 0.62
IRF3-223	ENST00000599223	CASP8AP2	Q9UKL3	1982 aa		18.93	■□□□□ 0.62
IRF3-223	ENST00000599223	WTIP	A6NIX2	430 aa	Predicted RBP	18.93	■□□□□ 0.62
IRF3-223	ENST00000599223	RPS12	P25398	132 aa	Known RBP	18.93	■□□□□ 0.62
IRF3-223	ENST00000599223	HHIPL1	Q96JK4	782 aa		18.93	■□□□□ 0.62
IRF3-223	ENST00000599223	ZIC5	Q96T25	663 aa		18.93	■□□□□ 0.62
IRF3-223	ENST00000599223	ANKIB1	Q9P2G1	1089 aa		18.93	■□□□□ 0.62
IRF3-223	ENST00000599223		A0A1B0GUL6	1792 aa		18.92	■□□□□ 0.62
IRF3-223	ENST00000599223	CTSW	P56202	376 aa		18.92	■□□□□ 0.62
IRF3-223	ENST00000599223	RBM26	Q5T8P6	1007 aa	Known RBP	18.92	■□□□□ 0.62
IRF3-223	ENST00000599223	G2E3	Q7L622	706 aa		18.92	■□□□□ 0.62
IRF3-223	ENST00000599223	KRT26	Q7Z3Y9	468 aa		18.92	■□□□□ 0.62
IRF3-223	ENST00000599223	GGA1	Q9UJY5	639 aa		18.92	■□□□□ 0.62
IRF3-223	ENST00000599223	PI4KAP2	A4QPH2	592 aa		18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	DDX58	O95786	925 aa	Known RBP	18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	VIL1	P09327	827 aa	Known RBP	18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	MAP2K2	P36507	400 aa		18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	CWF19L2	Q2TBE0	894 aa	Known RBP	18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	KIF4B	Q2VIQ3	1234 aa		18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	PI4KAP1	Q8N8J0	262 aa		18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	ABHD8	Q96I13	439 aa		18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	GGA3	Q9NZ52	723 aa		18.91	■□□□□ 0.62
IRF3-223	ENST00000599223	KSR2	Q6VAB6	950 aa		18.9	■□□□□ 0.62
IRF3-223	ENST00000599223	WWC1	Q8IX03	1113 aa		18.9	■□□□□ 0.62
IRF3-223	ENST00000599223	XDH	P47989	1333 aa		18.9	■□□□□ 0.62
IRF3-223	ENST00000599223	HSP90B1	P14625	803 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	BRPF1	P55201	1214 aa	Predicted RBP	18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	HUNK	P57058	714 aa		18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	ANKRD18A	Q8IVF6	992 aa		18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	BEGAIN	Q9BUH8	593 aa		18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	GREM2	Q9H772	168 aa		18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	CACNA1F	O60840	1977 aa		18.89	■□□□□ 0.61
IRF3-223	ENST00000599223	NEURL1B	A8MQ27	555 aa		18.88	■□□□□ 0.61
IRF3-223	ENST00000599223	CCDC27	Q2M243	656 aa		18.88	■□□□□ 0.61
IRF3-223	ENST00000599223	TTLL11	Q8NHH1	800 aa		18.88	■□□□□ 0.61
IRF3-223	ENST00000599223	FAM155A	B1AL88	458 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-223	ENST00000599223	ZNF280A	P59817	542 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-223	ENST00000599223	TWISTNB	Q3B726	338 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-223	ENST00000599223	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-223	ENST00000599223	GML	Q99445	158 aa		18.87	■□□□□ 0.61
IRF3-223	ENST00000599223	GBA2	Q9HCG7	927 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-223	ENST00000599223	PAPPA2	Q9BXP8	1791 aa		18.86	■□□□□ 0.61
IRF3-223	ENST00000599223	MED23	Q9ULK4	1368 aa		18.86	■□□□□ 0.61
IRF3-223	ENST00000599223	FANCI	Q9NVI1	1328 aa		18.86	■□□□□ 0.61
IRF3-223	ENST00000599223	UBE3B	Q7Z3V4	1068 aa		18.86	■□□□□ 0.61
IRF3-223	ENST00000599223	DCPS	Q96C86	337 aa	Known RBP	18.86	■□□□□ 0.61
IRF3-223	ENST00000599223	STK31	Q9BXU1	1019 aa		18.86	■□□□□ 0.61
IRF3-223	ENST00000599223	NOG	Q13253	232 aa		18.85	■□□□□ 0.61
IRF3-223	ENST00000599223	CDC5L	Q99459	802 aa	Known RBP	18.85	■□□□□ 0.61
IRF3-223	ENST00000599223	MINPP1	Q9UNW1	487 aa		18.85	■□□□□ 0.61
IRF3-223	ENST00000599223		G3V3G9	751 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	ATP2B4	P23634	1241 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	FAM161A	Q3B820	660 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	DCAF8	Q5TAQ9	597 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	ANGEL2	Q5VTE6	544 aa	Known RBP	18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	AGBL3	Q8NEM8	1001 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	CDCA5	Q96FF9	252 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	MXD3	Q9BW11	206 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	SCAF8	Q9UPN6	1271 aa	Known RBP	18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	AKAP11	Q9UKA4	1901 aa		18.84	■□□□□ 0.61
IRF3-223	ENST00000599223	IL16	Q14005	1332 aa		18.83	■□□□□ 0.61
IRF3-223	ENST00000599223		H7C1W4	665 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	CA12	O43570	354 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	SLC4A2	P04920	1241 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	KLRK1	P26718	216 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	CASP7	P55210	303 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	NEXN	Q0ZGT2	675 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	FLII	Q13045	1269 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	RGMB	Q6NW40	437 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	TXNRD3	Q86VQ6	643 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	SULF1	Q8IWU6	871 aa		18.83	■□□□□ 0.6
IRF3-223	ENST00000599223	BSDC1	Q9NW68	430 aa	Predicted RBP	18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms