RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 CDK2AP1O14519 115 aa10.88□□□□□ -0.67
LINC00343-207ENST00000599179 DGKGP49619 791 aa10.88□□□□□ -0.67
LINC00343-207ENST00000599179 MTFR1Q15390 333 aa10.88□□□□□ -0.67
LINC00343-207ENST00000599179 TBX22Q9Y458 520 aa10.88□□□□□ -0.67
LINC00343-207ENST00000599179 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
LINC00343-207ENST00000599179 NOS1P29475 1434 aa10.87□□□□□ -0.67
LINC00343-207ENST00000599179 A0A1W2PNR3 127 aa10.87□□□□□ -0.67
LINC00343-207ENST00000599179 USP21Q9UK80 565 aa10.87□□□□□ -0.67
LINC00343-207ENST00000599179 TRPC5Q9UL62 973 aaPredicted RBP10.87□□□□□ -0.67
LINC00343-207ENST00000599179 KANK1Q14678 1352 aa10.87□□□□□ -0.67
LINC00343-207ENST00000599179 ERBINQ96RT1 1412 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 RIMS2Q9UQ26 1411 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 A6NJY4 79 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 MAPTP10636 758 aaKnown RBP10.86□□□□□ -0.67
LINC00343-207ENST00000599179 TNP2Q05952 138 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 RRP7BPQ9NSQ0 103 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 SLC52A1Q9NWF4 448 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 SERTAD1Q9UHV2 236 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 GJA3Q9Y6H8 435 aa10.86□□□□□ -0.67
LINC00343-207ENST00000599179 ADAMTS13Q76LX8 1427 aa10.85□□□□□ -0.67
LINC00343-207ENST00000599179 DCDC2BA2VCK2 349 aa10.85□□□□□ -0.67
LINC00343-207ENST00000599179 TMEM229AB2RXF0 380 aa10.85□□□□□ -0.67
LINC00343-207ENST00000599179 BACH1O14867 736 aa10.85□□□□□ -0.67
LINC00343-207ENST00000599179 LZTS3O60299 673 aaPredicted RBP10.85□□□□□ -0.67
LINC00343-207ENST00000599179 FAM157BP0CG42 384 aa10.85□□□□□ -0.67
LINC00343-207ENST00000599179 SUV39H2Q9H5I1 410 aa10.85□□□□□ -0.67
LINC00343-207ENST00000599179 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
LINC00343-207ENST00000599179 CHD2O14647 1828 aaKnown RBP10.85□□□□□ -0.67
LINC00343-207ENST00000599179 ATRNO75882 1429 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 MST1RQ04912 1400 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 EML3Q32P44 896 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 SAMD5Q5TGI4 173 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 CHSY3Q70JA7 882 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 DEFB132Q7Z7B7 95 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 ZNF295-AS1Q8N0V1 137 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 LMTK2Q8IWU2 1503 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 DCCP43146 1447 aa10.84□□□□□ -0.67
LINC00343-207ENST00000599179 KHNYNO15037 678 aaKnown RBP10.83□□□□□ -0.68
LINC00343-207ENST00000599179 LAMC2Q13753 1193 aa10.83□□□□□ -0.68
LINC00343-207ENST00000599179 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
LINC00343-207ENST00000599179 CABP1Q9NZU7 370 aa10.83□□□□□ -0.68
LINC00343-207ENST00000599179 AMOTL2Q9Y2J4 779 aa10.83□□□□□ -0.68
LINC00343-207ENST00000599179 PIK3R4Q99570 1358 aa10.82□□□□□ -0.68
LINC00343-207ENST00000599179 CD33P20138 364 aa10.82□□□□□ -0.68
LINC00343-207ENST00000599179 PTPRUQ92729 1446 aa10.82□□□□□ -0.68
LINC00343-207ENST00000599179 MCM6Q14566 821 aa10.81□□□□□ -0.68
LINC00343-207ENST00000599179 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
LINC00343-207ENST00000599179 ZNF468Q5VIY5 522 aaPredicted RBP10.81□□□□□ -0.68
LINC00343-207ENST00000599179 ZIC5Q96T25 663 aa10.81□□□□□ -0.68
LINC00343-207ENST00000599179 PRR12Q9ULL5 1215 aa10.81□□□□□ -0.68
LINC00343-207ENST00000599179 NOD1Q9Y239 953 aa10.81□□□□□ -0.68
LINC00343-207ENST00000599179 BLMP54132 1417 aaPredicted RBP10.81□□□□□ -0.68
LINC00343-207ENST00000599179 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
LINC00343-207ENST00000599179 LRP5O75197 1615 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 NHSL1Q5SYE7 1610 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 XP32Q5T750 250 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 BICDL1Q6ZP65 573 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 WWC1Q8IX03 1113 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 NFATC2IPQ8NCF5 419 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC00343-207ENST00000599179 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
LINC00343-207ENST00000599179 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
LINC00343-207ENST00000599179 FCHSD1Q86WN1 690 aa10.79□□□□□ -0.68
LINC00343-207ENST00000599179 MARK1Q9P0L2 795 aa10.79□□□□□ -0.68
LINC00343-207ENST00000599179 GPC6Q9Y625 555 aaPredicted RBP10.79□□□□□ -0.68
LINC00343-207ENST00000599179 ABCC5O15440 1437 aa10.78□□□□□ -0.68
LINC00343-207ENST00000599179 PTCH1Q13635 1447 aa10.78□□□□□ -0.68
LINC00343-207ENST00000599179 FURINP09958 794 aa10.78□□□□□ -0.68
LINC00343-207ENST00000599179 SCHIP1Q9P0W5 487 aaPredicted RBP10.78□□□□□ -0.68
LINC00343-207ENST00000599179 TRPM2O94759 1503 aa10.78□□□□□ -0.68
LINC00343-207ENST00000599179 BCL9LQ86UU0 1499 aa10.77□□□□□ -0.69
LINC00343-207ENST00000599179 GTF2IP78347 998 aa10.77□□□□□ -0.69
LINC00343-207ENST00000599179 CD163Q86VB7 1156 aa10.77□□□□□ -0.69
LINC00343-207ENST00000599179 KLF15Q9UIH9 416 aa10.77□□□□□ -0.69
LINC00343-207ENST00000599179 USP3Q9Y6I4 520 aa10.77□□□□□ -0.69
LINC00343-207ENST00000599179 EFSO43281 561 aa10.76□□□□□ -0.69
LINC00343-207ENST00000599179 SKIP12755 728 aa10.76□□□□□ -0.69
LINC00343-207ENST00000599179 PSME1Q06323 249 aa10.76□□□□□ -0.69
LINC00343-207ENST00000599179 SPDYE3A6NKU9 549 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 PIK3CDO00329 1044 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 ALAS2P22557 587 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 YY1P25490 414 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 PCBP4P57723 403 aaKnown RBP10.75□□□□□ -0.69
LINC00343-207ENST00000599179 SF3B2Q13435 895 aaKnown RBP10.75□□□□□ -0.69
LINC00343-207ENST00000599179 HCN2Q9UL51 889 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 TMEM131LA2VDJ0 1609 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 ADGRL3Q9HAR2 1447 aa10.75□□□□□ -0.69
LINC00343-207ENST00000599179 ELOA3CA0A087WX78 387 aaPredicted RBP10.74□□□□□ -0.69
LINC00343-207ENST00000599179 ELOA3DA6NLF2 546 aaPredicted RBP10.74□□□□□ -0.69
LINC00343-207ENST00000599179 SPATA31C1P0DKV0 1188 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 CHRNA4P43681 627 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 TEAD4Q15561 434 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 ELOA3BQ3SY89 546 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 ELOA3Q8NG57 546 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
LINC00343-207ENST00000599179 RPRD2Q5VT52 1461 aaKnown RBP10.74□□□□□ -0.69
LINC00343-207ENST00000599179 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
LINC00343-207ENST00000599179 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
LINC00343-207ENST00000599179 ORAI2Q96SN7 254 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms