RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 PSMD14O00487 310 aa29.36■■■□□ 2.29
CCDC61-207ENST00000599044 CTSWP56202 376 aa29.36■■■□□ 2.29
CCDC61-207ENST00000599044 NEXNQ0ZGT2 675 aa29.36■■■□□ 2.29
CCDC61-207ENST00000599044 FLIIQ13045 1269 aa29.36■■■□□ 2.29
CCDC61-207ENST00000599044 TRPM4Q8TD43 1214 aa29.36■■■□□ 2.29
CCDC61-207ENST00000599044 CNOT7Q9UIV1 285 aaKnown RBP29.36■■■□□ 2.29
CCDC61-207ENST00000599044 ECE2O60344 883 aa29.35■■■□□ 2.29
CCDC61-207ENST00000599044 CST9Q5W186 159 aa29.35■■■□□ 2.29
CCDC61-207ENST00000599044 TTLL11Q8NHH1 800 aa29.35■■■□□ 2.29
CCDC61-207ENST00000599044 RTL9Q8NET4 1388 aa29.35■■■□□ 2.29
CCDC61-207ENST00000599044 WTIPA6NIX2 430 aaPredicted RBP29.34■■■□□ 2.29
CCDC61-207ENST00000599044 EYA3Q99504 573 aa29.34■■■□□ 2.29
CCDC61-207ENST00000599044 ANKIB1Q9P2G1 1089 aa29.34■■■□□ 2.29
CCDC61-207ENST00000599044 RASSF10A6NK89 507 aa29.33■■■□□ 2.29
CCDC61-207ENST00000599044 H7C1W4 665 aa29.33■■■□□ 2.29
CCDC61-207ENST00000599044 UFL1O94874 794 aa29.33■■■□□ 2.29
CCDC61-207ENST00000599044 MICALL2Q8IY33 904 aa29.33■■■□□ 2.29
CCDC61-207ENST00000599044 GREM2Q9H772 168 aa29.33■■■□□ 2.29
CCDC61-207ENST00000599044 PGAP2Q9UHJ9 254 aa29.33■■■□□ 2.29
CCDC61-207ENST00000599044 DEFB115Q30KQ5 88 aa29.32■■■□□ 2.28
CCDC61-207ENST00000599044 UBE3BQ7Z3V4 1068 aa29.32■■■□□ 2.28
CCDC61-207ENST00000599044 ANKRD18AQ8IVF6 992 aa29.32■■■□□ 2.28
CCDC61-207ENST00000599044 GGA1Q9UJY5 639 aa29.32■■■□□ 2.28
CCDC61-207ENST00000599044 FKBP5Q13451 457 aaPredicted RBP29.31■■■□□ 2.28
CCDC61-207ENST00000599044 GCKRQ14397 625 aa29.31■■■□□ 2.28
CCDC61-207ENST00000599044 GLIS2Q9BZE0 524 aaPredicted RBP29.31■■■□□ 2.28
CCDC61-207ENST00000599044 ZC3H12CQ9C0D7 883 aaKnown RBP29.31■■■□□ 2.28
CCDC61-207ENST00000599044 ABT1Q9ULW3 272 aaKnown RBP29.31■■■□□ 2.28
CCDC61-207ENST00000599044 EGFRP00533 1210 aa29.3■■■□□ 2.28
CCDC61-207ENST00000599044 SAMD7Q7Z3H4 446 aa29.3■■■□□ 2.28
CCDC61-207ENST00000599044 H7C1D1 291 aa29.29■■■□□ 2.28
CCDC61-207ENST00000599044 CASP7P55210 303 aa29.29■■■□□ 2.28
CCDC61-207ENST00000599044 DNAAF4Q8WXU2 420 aa29.29■■■□□ 2.28
CCDC61-207ENST00000599044 DPF2Q92785 391 aa29.29■■■□□ 2.28
CCDC61-207ENST00000599044 THSD7BQ9C0I4 1608 aa29.29■■■□□ 2.28
CCDC61-207ENST00000599044 DLK2Q6UY11 383 aa29.27■■■□□ 2.28
CCDC61-207ENST00000599044 XDHP47989 1333 aa29.26■■■□□ 2.27
CCDC61-207ENST00000599044 FOXN1O15353 648 aa29.26■■■□□ 2.27
CCDC61-207ENST00000599044 TBC1D10BQ4KMP7 808 aaPredicted RBP29.26■■■□□ 2.27
CCDC61-207ENST00000599044 ZC3H15Q8WU90 426 aaKnown RBP29.26■■■□□ 2.27
CCDC61-207ENST00000599044 CDC5LQ99459 802 aaKnown RBP29.26■■■□□ 2.27
CCDC61-207ENST00000599044 MINPP1Q9UNW1 487 aa29.26■■■□□ 2.27
CCDC61-207ENST00000599044 WDR33Q9C0J8 1336 aaKnown RBP29.25■■■□□ 2.27
CCDC61-207ENST00000599044 F6X3S4 739 aa29.25■■■□□ 2.27
CCDC61-207ENST00000599044 VIL1P09327 827 aaKnown RBP29.25■■■□□ 2.27
CCDC61-207ENST00000599044 LINS1Q8NG48 757 aa29.25■■■□□ 2.27
CCDC61-207ENST00000599044 BSDC1Q9NW68 430 aaPredicted RBP29.25■■■□□ 2.27
CCDC61-207ENST00000599044 SCN9AQ15858 1988 aa29.24■■■□□ 2.27
CCDC61-207ENST00000599044 G3V3G9 751 aa29.23■■■□□ 2.27
CCDC61-207ENST00000599044 ATP2B4P23634 1241 aa29.23■■■□□ 2.27
CCDC61-207ENST00000599044 RPS12P25398 132 aaKnown RBP29.23■■■□□ 2.27
CCDC61-207ENST00000599044 RBM26Q5T8P6 1007 aaKnown RBP29.23■■■□□ 2.27
CCDC61-207ENST00000599044 DCAF8Q5TAQ9 597 aa29.23■■■□□ 2.27
CCDC61-207ENST00000599044 PLA2G12BQ9BX93 195 aa29.23■■■□□ 2.27
CCDC61-207ENST00000599044 CAPN15O75808 1086 aa29.22■■■□□ 2.27
CCDC61-207ENST00000599044 CELF2O95319 508 aaKnown RBP29.22■■■□□ 2.27
CCDC61-207ENST00000599044 USP48Q86UV5 1035 aa29.22■■■□□ 2.27
CCDC61-207ENST00000599044 MYH16Q9H6N6 1097 aa29.22■■■□□ 2.27
CCDC61-207ENST00000599044 TLL2Q9Y6L7 1015 aa29.22■■■□□ 2.27
CCDC61-207ENST00000599044 CSF1RP07333 972 aa29.21■■■□□ 2.27
CCDC61-207ENST00000599044 FAM161AQ3B820 660 aa29.21■■■□□ 2.27
CCDC61-207ENST00000599044 CYP4F22Q6NT55 531 aa29.21■■■□□ 2.27
CCDC61-207ENST00000599044 CDC37L1Q7L3B6 337 aa29.21■■■□□ 2.27
CCDC61-207ENST00000599044 WBP1LQ9NX94 342 aa29.21■■■□□ 2.27
CCDC61-207ENST00000599044 ZNF521Q96K83 1311 aa29.2■■■□□ 2.27
CCDC61-207ENST00000599044 ITGA6P23229 1130 aa29.2■■■□□ 2.26
CCDC61-207ENST00000599044 BEND3Q5T5X7 828 aa29.2■■■□□ 2.26
CCDC61-207ENST00000599044 CAPNS2Q96L46 248 aa29.2■■■□□ 2.26
CCDC61-207ENST00000599044 MYH3P11055 1940 aa29.2■■■□□ 2.26
CCDC61-207ENST00000599044 SPEF2Q9C093 1822 aa29.2■■■□□ 2.26
CCDC61-207ENST00000599044 GRM1Q13255 1194 aa29.19■■■□□ 2.26
CCDC61-207ENST00000599044 ZNF408Q9H9D4 720 aa29.19■■■□□ 2.26
CCDC61-207ENST00000599044 CCT4P50991 539 aaKnown RBP29.18■■■□□ 2.26
CCDC61-207ENST00000599044 PAXIP1Q6ZW49 1069 aaPredicted RBP29.18■■■□□ 2.26
CCDC61-207ENST00000599044 SAPCD2Q86UD0 394 aa29.18■■■□□ 2.26
CCDC61-207ENST00000599044 PRDM10Q9NQV6 1147 aa29.18■■■□□ 2.26
CCDC61-207ENST00000599044 ASTN2O75129 1339 aaPredicted RBP29.18■■■□□ 2.26
CCDC61-207ENST00000599044 POLR2AP24928 1970 aaKnown RBP29.17■■■□□ 2.26
CCDC61-207ENST00000599044 FOXO4P98177 505 aa29.17■■■□□ 2.26
CCDC61-207ENST00000599044 RSBN1LQ6PCB5 846 aaPredicted RBP29.17■■■□□ 2.26
CCDC61-207ENST00000599044 TXNRD3Q86VQ6 643 aa29.17■■■□□ 2.26
CCDC61-207ENST00000599044 AIDAQ96BJ3 306 aa29.17■■■□□ 2.26
CCDC61-207ENST00000599044 IGHMBP2P38935 993 aaKnown RBP29.16■■■□□ 2.26
CCDC61-207ENST00000599044 CTCFP49711 727 aaPredicted RBP29.16■■■□□ 2.26
CCDC61-207ENST00000599044 GMLQ99445 158 aa29.16■■■□□ 2.26
CCDC61-207ENST00000599044 KIF4BQ2VIQ3 1234 aa29.15■■■□□ 2.26
CCDC61-207ENST00000599044 MED23Q9ULK4 1368 aa29.14■■■□□ 2.26
CCDC61-207ENST00000599044 ADM5C9JUS6 153 aa29.14■■■□□ 2.26
CCDC61-207ENST00000599044 KLRK1P26718 216 aa29.14■■■□□ 2.26
CCDC61-207ENST00000599044 ZNF280AP59817 542 aaPredicted RBP29.14■■■□□ 2.26
CCDC61-207ENST00000599044 PODNQ7Z5L7 613 aa29.14■■■□□ 2.26
CCDC61-207ENST00000599044 MXD3Q9BW11 206 aa29.14■■■□□ 2.26
CCDC61-207ENST00000599044 CACNA1FO60840 1977 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 USP17L3A6NCW0 530 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 USP17L4A6NCW7 530 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 AOC2O75106 756 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 EPHA10Q5JZY3 1008 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 USP17L1Q7RTZ2 530 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 KRT26Q7Z3Y9 468 aa29.13■■■□□ 2.25
CCDC61-207ENST00000599044 AGBL3Q8NEM8 1001 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms