RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
LINC00343-205ENST00000598229 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
LINC00343-205ENST00000598229 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
LINC00343-205ENST00000598229 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
LINC00343-205ENST00000598229 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
LINC00343-205ENST00000598229 CEMIPQ8WUJ3 1361 aa12.5□□□□□ -0.41
LINC00343-205ENST00000598229 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
LINC00343-205ENST00000598229 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
LINC00343-205ENST00000598229 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
LINC00343-205ENST00000598229 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
LINC00343-205ENST00000598229 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
LINC00343-205ENST00000598229 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
LINC00343-205ENST00000598229 SAGE1Q9NXZ1 904 aa12.49□□□□□ -0.41
LINC00343-205ENST00000598229 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
LINC00343-205ENST00000598229 KCNQ3O43525 872 aa12.48□□□□□ -0.41
LINC00343-205ENST00000598229 CDC37L1Q7L3B6 337 aa12.48□□□□□ -0.41
LINC00343-205ENST00000598229 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
LINC00343-205ENST00000598229 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
LINC00343-205ENST00000598229 COL4A5P29400 1685 aa12.48□□□□□ -0.41
LINC00343-205ENST00000598229 TRPM7Q96QT4 1865 aa12.47□□□□□ -0.41
LINC00343-205ENST00000598229 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
LINC00343-205ENST00000598229 GLIS2Q9BZE0 524 aaPredicted RBP12.47□□□□□ -0.41
LINC00343-205ENST00000598229 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
LINC00343-205ENST00000598229 BCORQ6W2J9 1755 aa12.46□□□□□ -0.41
LINC00343-205ENST00000598229 FAM177BA6PVY3 158 aa12.46□□□□□ -0.41
LINC00343-205ENST00000598229 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
LINC00343-205ENST00000598229 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-205ENST00000598229 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00343-205ENST00000598229 CXCL9Q07325 125 aa12.46□□□□□ -0.41
LINC00343-205ENST00000598229 NBPF10Q6P3W6 841 aaKnown RBP12.46□□□□□ -0.41
LINC00343-205ENST00000598229 NBPF15Q8N660 670 aa12.46□□□□□ -0.41
LINC00343-205ENST00000598229 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
LINC00343-205ENST00000598229 CASP8AP2Q9UKL3 1982 aa12.46□□□□□ -0.41
LINC00343-205ENST00000598229 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 ERVV-1B6SEH8 477 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 SOX10P56693 466 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 HLFQ16534 295 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
LINC00343-205ENST00000598229 ZIC5Q96T25 663 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
LINC00343-205ENST00000598229 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
LINC00343-205ENST00000598229 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
LINC00343-205ENST00000598229 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-205ENST00000598229 HIRAP54198 1017 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-205ENST00000598229 HUNKP57058 714 aa12.44□□□□□ -0.42
LINC00343-205ENST00000598229 TNIP1Q15025 636 aa12.44□□□□□ -0.42
LINC00343-205ENST00000598229 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
LINC00343-205ENST00000598229 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-205ENST00000598229 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-205ENST00000598229 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-205ENST00000598229 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-205ENST00000598229 RGMBQ6NW40 437 aa12.43□□□□□ -0.42
LINC00343-205ENST00000598229 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
LINC00343-205ENST00000598229 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
LINC00343-205ENST00000598229 ATP6V0A2Q9Y487 856 aa12.43□□□□□ -0.42
LINC00343-205ENST00000598229 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-205ENST00000598229 HSPA5P11021 654 aaKnown RBP12.42□□□□□ -0.42
LINC00343-205ENST00000598229 AOC3Q16853 763 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
LINC00343-205ENST00000598229 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 ADAM33Q9BZ11 813 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 ZNF408Q9H9D4 720 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
LINC00343-205ENST00000598229 ABCC12Q96J65 1359 aa12.42□□□□□ -0.42
LINC00343-205ENST00000598229 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-205ENST00000598229 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
LINC00343-205ENST00000598229 KIF23Q02241 960 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-205ENST00000598229 PKN2Q16513 984 aaKnown RBP12.41□□□□□ -0.42
LINC00343-205ENST00000598229 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
LINC00343-205ENST00000598229 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
LINC00343-205ENST00000598229 CNOT7Q9UIV1 285 aaKnown RBP12.41□□□□□ -0.42
LINC00343-205ENST00000598229 H7C1D1 291 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 TRPA1O75762 1119 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 BBOX1O75936 387 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 C2orf69Q8N8R5 385 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 DPF2Q92785 391 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
LINC00343-205ENST00000598229 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
LINC00343-205ENST00000598229 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
LINC00343-205ENST00000598229 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
LINC00343-205ENST00000598229 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
LINC00343-205ENST00000598229 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
LINC00343-205ENST00000598229 TRPM4Q8TD43 1214 aa12.39□□□□□ -0.43
LINC00343-205ENST00000598229 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
LINC00343-205ENST00000598229 CSRNP1Q96S65 589 aa12.39□□□□□ -0.43
LINC00343-205ENST00000598229 GBA2Q9HCG7 927 aaPredicted RBP12.39□□□□□ -0.43
LINC00343-205ENST00000598229 TCERG1O14776 1098 aaKnown RBP12.38□□□□□ -0.43
LINC00343-205ENST00000598229 HTATSF1O43719 755 aaKnown RBP12.38□□□□□ -0.43
LINC00343-205ENST00000598229 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
LINC00343-205ENST00000598229 SUSD4Q5VX71 490 aa12.38□□□□□ -0.43
LINC00343-205ENST00000598229 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
LINC00343-205ENST00000598229 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
LINC00343-205ENST00000598229 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
LINC00343-205ENST00000598229 ZNF34Q8IZ26 560 aa12.38□□□□□ -0.43
LINC00343-205ENST00000598229 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms