RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 ECE2O60344 883 aa17.35■□□□□ 0.37
IRF3-218ENST00000597369 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
IRF3-218ENST00000597369 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
IRF3-218ENST00000597369 PRO3102Q9H379 93 aa17.35■□□□□ 0.37
IRF3-218ENST00000597369 ZNF609O15014 1411 aa17.35■□□□□ 0.37
IRF3-218ENST00000597369 LAMB1P07942 1786 aa17.34■□□□□ 0.37
IRF3-218ENST00000597369 UTP14AQ9BVJ6 771 aaKnown RBP17.34■□□□□ 0.37
IRF3-218ENST00000597369 ZBTB3Q9H5J0 574 aa17.34■□□□□ 0.37
IRF3-218ENST00000597369 VCANP13611 3396 aa17.33■□□□□ 0.37
IRF3-218ENST00000597369 MKRN3Q13064 507 aaKnown RBP17.33■□□□□ 0.36
IRF3-218ENST00000597369 AMER1Q5JTC6 1135 aaPredicted RBP17.33■□□□□ 0.36
IRF3-218ENST00000597369 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
IRF3-218ENST00000597369 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
IRF3-218ENST00000597369 TCIRG1Q13488 830 aa17.32■□□□□ 0.36
IRF3-218ENST00000597369 IFNL1Q8IU54 200 aa17.32■□□□□ 0.36
IRF3-218ENST00000597369 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
IRF3-218ENST00000597369 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
IRF3-218ENST00000597369 PSME4Q14997 1843 aa17.31■□□□□ 0.36
IRF3-218ENST00000597369 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
IRF3-218ENST00000597369 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
IRF3-218ENST00000597369 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
IRF3-218ENST00000597369 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
IRF3-218ENST00000597369 MANSC4A6NHS7 340 aaPredicted RBP17.3■□□□□ 0.36
IRF3-218ENST00000597369 PTPN12Q05209 780 aaKnown RBP17.3■□□□□ 0.36
IRF3-218ENST00000597369 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
IRF3-218ENST00000597369 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
IRF3-218ENST00000597369 CD99L2Q8TCZ2 262 aa17.3■□□□□ 0.36
IRF3-218ENST00000597369 EYA3Q99504 573 aa17.3■□□□□ 0.36
IRF3-218ENST00000597369 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
IRF3-218ENST00000597369 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
IRF3-218ENST00000597369 A0A1W2PPC1 479 aa17.29■□□□□ 0.36
IRF3-218ENST00000597369 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
IRF3-218ENST00000597369 NF2P35240 595 aa17.29■□□□□ 0.36
IRF3-218ENST00000597369 LDLRAD1Q5T700 205 aa17.29■□□□□ 0.36
IRF3-218ENST00000597369 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
IRF3-218ENST00000597369 COL3A1P02461 1466 aaPredicted RBP17.29■□□□□ 0.36
IRF3-218ENST00000597369 C6orf229H3BNL8 230 aa17.28■□□□□ 0.36
IRF3-218ENST00000597369 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
IRF3-218ENST00000597369 PRAMEF18Q5VWM3 479 aa17.28■□□□□ 0.36
IRF3-218ENST00000597369 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
IRF3-218ENST00000597369 MCM10Q7L590 875 aa17.28■□□□□ 0.36
IRF3-218ENST00000597369 GMLQ99445 158 aa17.28■□□□□ 0.36
IRF3-218ENST00000597369 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.36
IRF3-218ENST00000597369 MYL6BP14649 208 aa17.27■□□□□ 0.36
IRF3-218ENST00000597369 SLC4A8Q2Y0W8 1093 aa17.27■□□□□ 0.36
IRF3-218ENST00000597369 ARMC9Q7Z3E5 817 aa17.27■□□□□ 0.36
IRF3-218ENST00000597369 SPTBN5Q9NRC6 3674 aaKnown RBP17.26■□□□□ 0.35
IRF3-218ENST00000597369 IGF2BP3O00425 579 aaKnown RBP eCLIP17.26■□□□□ 0.35
IRF3-218ENST00000597369 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
IRF3-218ENST00000597369 USP17L8P0C7I0 530 aa17.26■□□□□ 0.35
IRF3-218ENST00000597369 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
IRF3-218ENST00000597369 SP3Q02447 781 aa17.26■□□□□ 0.35
IRF3-218ENST00000597369 SLC9C1Q4G0N8 1177 aa17.26■□□□□ 0.35
IRF3-218ENST00000597369 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
IRF3-218ENST00000597369 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
IRF3-218ENST00000597369 GPSM2P81274 684 aa17.25■□□□□ 0.35
IRF3-218ENST00000597369 CAP1Q01518 475 aa17.25■□□□□ 0.35
IRF3-218ENST00000597369 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
IRF3-218ENST00000597369 DPF3Q92784 378 aa17.25■□□□□ 0.35
IRF3-218ENST00000597369 COL25A1Q9BXS0 654 aaPredicted RBP17.25■□□□□ 0.35
IRF3-218ENST00000597369 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
IRF3-218ENST00000597369 PRKAR2BP31323 418 aa17.24■□□□□ 0.35
IRF3-218ENST00000597369 CRHR2Q13324 411 aa17.24■□□□□ 0.35
IRF3-218ENST00000597369 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
IRF3-218ENST00000597369 ARHGEF6Q15052 776 aa17.23■□□□□ 0.35
IRF3-218ENST00000597369 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
IRF3-218ENST00000597369 OTUD7BQ6GQQ9 843 aa17.23■□□□□ 0.35
IRF3-218ENST00000597369 GPR153Q6NV75 609 aa17.23■□□□□ 0.35
IRF3-218ENST00000597369 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
IRF3-218ENST00000597369 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
IRF3-218ENST00000597369 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
IRF3-218ENST00000597369 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
IRF3-218ENST00000597369 SOX1O00570 391 aaPredicted RBP17.22■□□□□ 0.35
IRF3-218ENST00000597369 CELF1Q92879 486 aaKnown RBP17.22■□□□□ 0.35
IRF3-218ENST00000597369 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
IRF3-218ENST00000597369 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
IRF3-218ENST00000597369 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 MAP3K11Q16584 847 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 MIS18AQ9NYP9 233 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
IRF3-218ENST00000597369 PTCH2Q9Y6C5 1203 aa17.21■□□□□ 0.35
IRF3-218ENST00000597369 UNCXA6NJT0 531 aa17.2■□□□□ 0.34
IRF3-218ENST00000597369 G3V3G9 751 aa17.2■□□□□ 0.34
IRF3-218ENST00000597369 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
IRF3-218ENST00000597369 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
IRF3-218ENST00000597369 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
IRF3-218ENST00000597369 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
IRF3-218ENST00000597369 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
IRF3-218ENST00000597369 WNT10BO00744 389 aa17.19■□□□□ 0.34
IRF3-218ENST00000597369 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
IRF3-218ENST00000597369 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
IRF3-218ENST00000597369 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
IRF3-218ENST00000597369 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
IRF3-218ENST00000597369 STXBP5LQ9Y2K9 1186 aa17.19■□□□□ 0.34
IRF3-218ENST00000597369 NR2E3Q9Y5X4 410 aa17.19■□□□□ 0.34
IRF3-218ENST00000597369 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
IRF3-218ENST00000597369 PRKG1Q13976 671 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms