RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CREB3L3Q68CJ9 461 aa20.33■□□□□ 0.85
SHKBP1-205ENST00000594973 TTC14Q96N46 770 aa20.33■□□□□ 0.85
SHKBP1-205ENST00000594973 WNK3Q9BYP7 1800 aa20.33■□□□□ 0.85
SHKBP1-205ENST00000594973 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-205ENST00000594973 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 IL6STP40189 918 aaPredicted RBP20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 IFIT5Q13325 482 aaKnown RBP20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 HSP90AB3PQ58FF7 597 aa20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 PRIMPOLQ96LW4 560 aa20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 CEP126Q9P2H0 1117 aa20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.84
SHKBP1-205ENST00000594973 GOLIM4O00461 696 aa20.32■□□□□ 0.84
SHKBP1-205ENST00000594973 NRAPQ86VF7 1730 aa20.32■□□□□ 0.84
SHKBP1-205ENST00000594973 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
SHKBP1-205ENST00000594973 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
SHKBP1-205ENST00000594973 MCTP1Q6DN14 999 aa20.32■□□□□ 0.84
SHKBP1-205ENST00000594973 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 GTF2F1P35269 517 aaKnown RBP eCLIP20.31■□□□□ 0.841e-6■■■■■ 54.6
SHKBP1-205ENST00000594973 HMGN5P82970 282 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 INTS4Q96HW7 963 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 PLA2G12BQ9BX93 195 aa20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 SNRKQ9NRH2 765 aa20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 CSF1RP07333 972 aa20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 RUFY3Q7L099 469 aa20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 C8orf37Q96NL8 207 aa20.31■□□□□ 0.84
SHKBP1-205ENST00000594973 LOC102724428A0A0B4J2F2 783 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 SLC27A2O14975 620 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 SIK1P57059 783 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 CCDC129Q6ZRS4 1044 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 GREM2Q9H772 168 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 PAG1Q9NWQ8 432 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 ZNF609O15014 1411 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 KCNQ2O43526 872 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 CRKLP46109 303 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 SLFNL1Q499Z3 407 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 LRSAM1Q6UWE0 723 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 PDRG1Q9NUG6 133 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
SHKBP1-205ENST00000594973 TAF5LO75529 589 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 ITGA6P23229 1130 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 INTS5Q6P9B9 1019 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 KBTBD3Q8NAB2 608 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 KCNB2Q92953 911 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 CHAMP1Q96JM3 812 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 CCDC87Q9NVE4 849 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 TAF6LQ9Y6J9 622 aa20.29■□□□□ 0.84
SHKBP1-205ENST00000594973 FAM177BA6PVY3 158 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 GORABQ5T7V8 394 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 BARGINQ6ZT62 677 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 NGLY1Q96IV0 654 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 ZSWIM6Q9HCJ5 1215 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 UBN2Q6ZU65 1347 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 CDHR2Q9BYE9 1310 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 SLIT2O94813 1529 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 ADORA1P30542 326 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 CTSWP56202 376 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 ITPK1Q13572 414 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 COL9A3Q14050 684 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 PPP4R3BQ5MIZ7 849 aa20.28■□□□□ 0.84
SHKBP1-205ENST00000594973 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 LDHAL6AQ6ZMR3 332 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 ARID3AQ99856 593 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 PDE4CQ08493 712 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 MCMDC2Q4G0Z9 681 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 VPS53Q5VIR6 699 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 RNF20Q5VTR2 975 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 TM6SF1Q9BZW5 370 aa20.27■□□□□ 0.84
SHKBP1-205ENST00000594973 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
SHKBP1-205ENST00000594973 TAF3Q5VWG9 929 aa20.26■□□□□ 0.83
SHKBP1-205ENST00000594973 AKAP2Q9Y2D5 859 aa20.26■□□□□ 0.83
SHKBP1-205ENST00000594973 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
SHKBP1-205ENST00000594973 LARGE1O95461 756 aa20.26■□□□□ 0.83
SHKBP1-205ENST00000594973 XAGE2Q96GT9 111 aa20.26■□□□□ 0.83
SHKBP1-205ENST00000594973 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 TCEANC2Q96MN5 208 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 DTNBO60941 627 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 TTC39AQ5SRH9 613 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 CNNM1Q9NRU3 951 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
SHKBP1-205ENST00000594973 RFX7Q2KHR2 1363 aa20.24■□□□□ 0.83
SHKBP1-205ENST00000594973 BRD1O95696 1058 aa20.24■□□□□ 0.83
SHKBP1-205ENST00000594973 PSMA5P28066 241 aa20.24■□□□□ 0.83
SHKBP1-205ENST00000594973 PDE8AO60658 829 aa20.24■□□□□ 0.83
SHKBP1-205ENST00000594973 HCLS1P14317 486 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-205ENST00000594973 FOXD4L6Q3SYB3 417 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-205ENST00000594973 FOXD4L3Q6VB84 417 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-205ENST00000594973 ZNF710Q8N1W2 664 aa20.23■□□□□ 0.83
SHKBP1-205ENST00000594973 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms