RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ANKRD24Q8TF21 1146 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 DNAJC25Q9H1X3 360 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 CLIP2Q9UDT6 1046 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 MST1RQ04912 1400 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 PRAMEF22A3QJZ6 481 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 GOLGA6L19H0YKK7 550 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 JAK2O60674 1132 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 RBM6P78332 1123 aaKnown RBP15.57■□□□□ 0.08
VRK3-209ENST00000594948 STK3Q13188 491 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 HAUS7Q99871 368 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 SIL1Q9H173 461 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 KCND1Q9NSA2 647 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 DBNLQ9UJU6 430 aaKnown RBP15.57■□□□□ 0.08
VRK3-209ENST00000594948 TNNT1P13805 278 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 ADD1P35611 737 aaKnown RBP15.57■□□□□ 0.08
VRK3-209ENST00000594948 LRMPQ12912 555 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 ZNF396Q96N95 335 aaPredicted RBP15.57■□□□□ 0.08
VRK3-209ENST00000594948 AGXT2Q9BYV1 514 aa15.57■□□□□ 0.08
VRK3-209ENST00000594948 GCP02774 474 aa15.56■□□□□ 0.08
VRK3-209ENST00000594948 NCBP1Q09161 790 aaKnown RBP15.56■□□□□ 0.08
VRK3-209ENST00000594948 DDX60Q8IY21 1712 aaKnown RBP15.56■□□□□ 0.08
VRK3-209ENST00000594948 CACTINQ8WUQ7 758 aaKnown RBP15.56■□□□□ 0.08
VRK3-209ENST00000594948 NRBP1Q9UHY1 535 aa15.56■□□□□ 0.08
VRK3-209ENST00000594948 CYP21A2P08686 494 aa15.55■□□□□ 0.08
VRK3-209ENST00000594948 HSP90B1P14625 803 aaKnown RBP15.55■□□□□ 0.08
VRK3-209ENST00000594948 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
VRK3-209ENST00000594948 SCRN1Q12765 414 aa15.55■□□□□ 0.08
VRK3-209ENST00000594948 EPHA10Q5JZY3 1008 aa15.55■□□□□ 0.08
VRK3-209ENST00000594948 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
VRK3-209ENST00000594948 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
VRK3-209ENST00000594948 ARID3AQ99856 593 aa15.55■□□□□ 0.08
VRK3-209ENST00000594948 CGNQ9P2M7 1197 aaKnown RBP15.55■□□□□ 0.08
VRK3-209ENST00000594948 TMEM94Q12767 1356 aa15.55■□□□□ 0.08
VRK3-209ENST00000594948 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
VRK3-209ENST00000594948 CCDC73Q6ZRK6 1079 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 LRRC8AQ8IWT6 810 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 NSUN7Q8NE18 718 aaKnown RBP15.54■□□□□ 0.08
VRK3-209ENST00000594948 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 HELLSQ9NRZ9 838 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 ANO10Q9NW15 660 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
VRK3-209ENST00000594948 FAM177BA6PVY3 158 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 CBX1P83916 185 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 KBTBD3Q8NAB2 608 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 CCDC112Q8NEF3 446 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 C16orf45Q96MC5 204 aaPredicted RBP15.54■□□□□ 0.08
VRK3-209ENST00000594948 MYD88Q99836 296 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 OGFRQ9NZT2 677 aa15.54■□□□□ 0.08
VRK3-209ENST00000594948 ALS2Q96Q42 1657 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
VRK3-209ENST00000594948 KIF20AO95235 890 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 FAM160A1Q05DH4 1040 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 TFCP2Q12800 502 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 DHX8Q14562 1220 aaKnown RBP15.53■□□□□ 0.08
VRK3-209ENST00000594948 TPD52L1Q16890 204 aaPredicted RBP15.53■□□□□ 0.08
VRK3-209ENST00000594948 CCDC144BQ3MJ40 725 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 CCAR1Q8IX12 1150 aaKnown RBP15.53■□□□□ 0.08
VRK3-209ENST00000594948 CCDC144CPQ8IYA2 1237 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 FBXL16Q8N461 479 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 ENGASEQ8NFI3 743 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 KLHDC4Q8TBB5 520 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 SLC52A2Q9HAB3 445 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 GPR108Q9NPR9 543 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 SALL1Q9NSC2 1324 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 NUP188Q5SRE5 1749 aa15.53■□□□□ 0.08
VRK3-209ENST00000594948 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.08
VRK3-209ENST00000594948 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.08
VRK3-209ENST00000594948 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.08
VRK3-209ENST00000594948 EDC3Q96F86 508 aaKnown RBP15.52■□□□□ 0.08
VRK3-209ENST00000594948 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.08
VRK3-209ENST00000594948 TJP1Q07157 1748 aa15.52■□□□□ 0.07
VRK3-209ENST00000594948 KIF2AO00139 706 aaPredicted RBP15.52■□□□□ 0.07
VRK3-209ENST00000594948 KINO60870 393 aaKnown RBP15.52■□□□□ 0.07
VRK3-209ENST00000594948 SNW1Q13573 536 aaKnown RBP15.52■□□□□ 0.07
VRK3-209ENST00000594948 CEP135Q66GS9 1140 aa15.52■□□□□ 0.07
VRK3-209ENST00000594948 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.07
VRK3-209ENST00000594948 C11orf57Q6ZUT1 292 aaPredicted RBP15.52■□□□□ 0.07
VRK3-209ENST00000594948 NYAP1Q6ZVC0 841 aa15.52■□□□□ 0.07
VRK3-209ENST00000594948 COPS6Q7L5N1 327 aa15.52■□□□□ 0.07
VRK3-209ENST00000594948 RGS22Q8NE09 1264 aa15.52■□□□□ 0.07
VRK3-209ENST00000594948 ZNF274Q96GC6 653 aaPredicted RBP15.52■□□□□ 0.07
VRK3-209ENST00000594948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.52■□□□□ 0.071e-7■■□□□ 12.1
VRK3-209ENST00000594948 GLI3P10071 1580 aa15.51■□□□□ 0.07
VRK3-209ENST00000594948 PTPDC1A2A3K4 754 aa15.51■□□□□ 0.07
VRK3-209ENST00000594948 GSDMDP57764 484 aa15.51■□□□□ 0.07
VRK3-209ENST00000594948 STOX1Q6ZVD7 989 aa15.51■□□□□ 0.07
VRK3-209ENST00000594948 NAT10Q9H0A0 1025 aaKnown RBP15.51■□□□□ 0.07
VRK3-209ENST00000594948 IMPACTQ9P2X3 320 aa15.51■□□□□ 0.07
VRK3-209ENST00000594948 CTNNA3Q9UI47 895 aa15.51■□□□□ 0.07
VRK3-209ENST00000594948 A0A1W2PQ27 194 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 A0A1W2PQ64 194 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 A0A1W2PQD8 194 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 CTDNEP1O95476 244 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
VRK3-209ENST00000594948 CEP57L1Q8IYX8 460 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 DDX11Q96FC9 970 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms