RNA–Protein interactions for RNA: ENST00000594942.5

SOX2-OT-221, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 675 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-221ENST00000594942 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 ECE1P42892 770 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 MAP2K1Q02750 393 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 MYH3P11055 1940 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 ZNF609O15014 1411 aa16.01■□□□□ 0.15
SOX2-OT-221ENST00000594942 SCN9AQ15858 1988 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 SHTN1A0MZ66 631 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 CTSWP56202 376 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 JARID2Q92833 1246 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-221ENST00000594942 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-221ENST00000594942 MRS2Q9HD23 443 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 GGA1Q9UJY5 639 aa16■□□□□ 0.15
SOX2-OT-221ENST00000594942 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-221ENST00000594942 XDHP47989 1333 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 PSME4Q14997 1843 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 ANP32CO43423 234 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 UFL1O94874 794 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 CELF2O95319 508 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 VIL1P09327 827 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 G2E3Q7L622 706 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 WDR63Q8IWG1 891 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 HHIPL1Q96JK4 782 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 CAPNS2Q96L46 248 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 CDC5LQ99459 802 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
SOX2-OT-221ENST00000594942 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
SOX2-OT-221ENST00000594942 SAPCD2Q86UD0 394 aa15.98■□□□□ 0.15
SOX2-OT-221ENST00000594942 TTLL11Q8NHH1 800 aa15.98■□□□□ 0.15
SOX2-OT-221ENST00000594942 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
SOX2-OT-221ENST00000594942 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 H7C1W4 665 aa15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 ATP2B4P23634 1241 aa15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 CYP4F22Q6NT55 531 aa15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 SAMD7Q7Z3H4 446 aa15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
SOX2-OT-221ENST00000594942 HSPA8P11142 646 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-221ENST00000594942 MAP2K2P36507 400 aa15.96■□□□□ 0.15
SOX2-OT-221ENST00000594942 FLIIQ13045 1269 aa15.96■□□□□ 0.15
SOX2-OT-221ENST00000594942 BSDC1Q9NW68 430 aaPredicted RBP15.96■□□□□ 0.15
SOX2-OT-221ENST00000594942 SPEF2Q9C093 1822 aa15.96■□□□□ 0.14
SOX2-OT-221ENST00000594942 VAMP4O75379 141 aa15.95■□□□□ 0.14
SOX2-OT-221ENST00000594942 TBC1D10BQ4KMP7 808 aaPredicted RBP15.95■□□□□ 0.14
SOX2-OT-221ENST00000594942 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
SOX2-OT-221ENST00000594942 AGBL3Q8NEM8 1001 aa15.95■□□□□ 0.14
SOX2-OT-221ENST00000594942 GREM2Q9H772 168 aa15.95■□□□□ 0.14
SOX2-OT-221ENST00000594942 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
SOX2-OT-221ENST00000594942 G3V3G9 751 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 EGFRP00533 1210 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 LBX1P52954 281 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 CASP7P55210 303 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 GCKRQ14397 625 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 RSBN1LQ6PCB5 846 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 PODNQ7Z5L7 613 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 MINPP1Q9UNW1 487 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 MED23Q9ULK4 1368 aa15.94■□□□□ 0.14
SOX2-OT-221ENST00000594942 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
SOX2-OT-221ENST00000594942 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
SOX2-OT-221ENST00000594942 LINS1Q8NG48 757 aa15.93■□□□□ 0.14
SOX2-OT-221ENST00000594942 GMLQ99445 158 aa15.93■□□□□ 0.14
SOX2-OT-221ENST00000594942 CSF1RP07333 972 aa15.92■□□□□ 0.14
SOX2-OT-221ENST00000594942 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
SOX2-OT-221ENST00000594942 KRT26Q7Z3Y9 468 aa15.92■□□□□ 0.14
SOX2-OT-221ENST00000594942 DCPSQ96C86 337 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-221ENST00000594942 ZNF408Q9H9D4 720 aa15.92■□□□□ 0.14
SOX2-OT-221ENST00000594942 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 AOC2O75106 756 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 CAPN15O75808 1086 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 IGHMBP2P38935 993 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 BEGAINQ9BUH8 593 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 LEMD3Q9Y2U8 911 aa15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
SOX2-OT-221ENST00000594942 CA12O43570 354 aa15.9■□□□□ 0.14
SOX2-OT-221ENST00000594942 ITGA6P23229 1130 aa15.9■□□□□ 0.14
SOX2-OT-221ENST00000594942 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
SOX2-OT-221ENST00000594942 GRM1Q13255 1194 aa15.9■□□□□ 0.14
SOX2-OT-221ENST00000594942 RBM26Q5T8P6 1007 aaKnown RBP15.9■□□□□ 0.14
SOX2-OT-221ENST00000594942 WTIPA6NIX2 430 aaPredicted RBP15.89■□□□□ 0.13
SOX2-OT-221ENST00000594942 ADM5C9JUS6 153 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms