RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 EYA3Q99504 573 aa32.28■■■□□ 2.76
TRIM28-204ENST00000594806 LTBP1Q14766 1721 aa32.28■■■□□ 2.76
TRIM28-204ENST00000594806 LARGE2Q8N3Y3 721 aa32.27■■■□□ 2.76
TRIM28-204ENST00000594806 ANKRD2Q9GZV1 360 aa32.27■■■□□ 2.76
TRIM28-204ENST00000594806 PPIP5K2O43314 1243 aa32.26■■■□□ 2.75
TRIM28-204ENST00000594806 KIAA2012Q0VF49 1180 aa32.26■■■□□ 2.75
TRIM28-204ENST00000594806 GGA1Q9UJY5 639 aa32.26■■■□□ 2.75
TRIM28-204ENST00000594806 DUOX1Q9NRD9 1551 aa32.25■■■□□ 2.75
TRIM28-204ENST00000594806 ATP2B4P23634 1241 aa32.25■■■□□ 2.75
TRIM28-204ENST00000594806 DPY19L2Q6NUT2 758 aa32.25■■■□□ 2.75
TRIM28-204ENST00000594806 TBC1D16Q8TBP0 767 aa32.25■■■□□ 2.75
TRIM28-204ENST00000594806 POLLQ9UGP5 575 aa32.25■■■□□ 2.75
TRIM28-204ENST00000594806 LRRFIP2Q9Y608 721 aaKnown RBP32.25■■■□□ 2.75
TRIM28-204ENST00000594806 C6orf229H3BNL8 230 aa32.24■■■□□ 2.75
TRIM28-204ENST00000594806 RLBP1P12271 317 aa32.24■■■□□ 2.75
TRIM28-204ENST00000594806 LDHAL6AQ6ZMR3 332 aa32.24■■■□□ 2.75
TRIM28-204ENST00000594806 ITPRIPQ8IWB1 547 aa32.24■■■□□ 2.75
TRIM28-204ENST00000594806 KDM2BQ8NHM5 1336 aa32.24■■■□□ 2.75
TRIM28-204ENST00000594806 WASHC4Q2M389 1173 aa32.23■■■□□ 2.75
TRIM28-204ENST00000594806 GLTPD2A6NH11 291 aa32.22■■■□□ 2.75
TRIM28-204ENST00000594806 FZD9O00144 591 aa32.22■■■□□ 2.75
TRIM28-204ENST00000594806 GNAI2P04899 355 aa32.22■■■□□ 2.75
TRIM28-204ENST00000594806 AOC3Q16853 763 aa32.22■■■□□ 2.75
TRIM28-204ENST00000594806 NIM1KQ8IY84 436 aa32.22■■■□□ 2.75
TRIM28-204ENST00000594806 LEMD3Q9Y2U8 911 aa32.22■■■□□ 2.75
TRIM28-204ENST00000594806 UFL1O94874 794 aa32.21■■■□□ 2.75
TRIM28-204ENST00000594806 PDE3AQ14432 1141 aa32.21■■■□□ 2.75
TRIM28-204ENST00000594806 GPBP1L1Q9HC44 474 aaPredicted RBP32.21■■■□□ 2.75
TRIM28-204ENST00000594806 CNNM1Q9NRU3 951 aa32.21■■■□□ 2.75
TRIM28-204ENST00000594806 CHRNDQ07001 517 aa32.2■■■□□ 2.75
TRIM28-204ENST00000594806 ZNF594Q96JF6 807 aaPredicted RBP32.2■■■□□ 2.75
TRIM28-204ENST00000594806 PANK1Q8TE04 598 aa32.19■■■□□ 2.74
TRIM28-204ENST00000594806 ZC3H12CQ9C0D7 883 aaKnown RBP32.19■■■□□ 2.74
TRIM28-204ENST00000594806 ZBTB7BO15156 539 aaPredicted RBP32.18■■■□□ 2.74
TRIM28-204ENST00000594806 EIF6P56537 245 aaKnown RBP32.18■■■□□ 2.74
TRIM28-204ENST00000594806 MTX1Q13505 466 aa32.18■■■□□ 2.74
TRIM28-204ENST00000594806 CHMP4BQ9H444 224 aaKnown RBP32.18■■■□□ 2.74
TRIM28-204ENST00000594806 FBXO3Q9UK99 471 aa32.18■■■□□ 2.74
TRIM28-204ENST00000594806 ZNRF3Q9ULT6 936 aa32.17■■■□□ 2.74
TRIM28-204ENST00000594806 PLIN1O60240 522 aa32.16■■■□□ 2.74
TRIM28-204ENST00000594806 RFX5P48382 616 aaPredicted RBP32.16■■■□□ 2.74
TRIM28-204ENST00000594806 MVPQ14764 893 aaKnown RBP32.15■■■□□ 2.74
TRIM28-204ENST00000594806 DDX19BQ9UMR2 479 aa32.15■■■□□ 2.74
TRIM28-204ENST00000594806 RIPOR2Q9Y4F9 1068 aa32.15■■■□□ 2.74
TRIM28-204ENST00000594806 MROH5Q6ZUA9 1318 aa32.15■■■□□ 2.74
TRIM28-204ENST00000594806 COL4A5P29400 1685 aa32.15■■■□□ 2.74
TRIM28-204ENST00000594806 ZNF526Q8TF50 670 aaPredicted RBP32.14■■■□□ 2.74
TRIM28-204ENST00000594806 ZNF804BA4D1E1 1349 aa32.14■■■□□ 2.74
TRIM28-204ENST00000594806 MED23Q9ULK4 1368 aa32.14■■■□□ 2.74
TRIM28-204ENST00000594806 A0A1B0GUL6 1792 aa32.13■■■□□ 2.73
TRIM28-204ENST00000594806 RIMBP2O15034 1052 aa32.13■■■□□ 2.73
TRIM28-204ENST00000594806 KCNJ4P48050 445 aa32.13■■■□□ 2.73
TRIM28-204ENST00000594806 PTPN12Q05209 780 aaKnown RBP32.13■■■□□ 2.73
TRIM28-204ENST00000594806 GPC2Q8N158 579 aa32.12■■■□□ 2.73
TRIM28-204ENST00000594806 PUS3Q9BZE2 481 aaKnown RBP32.11■■■□□ 2.73
TRIM28-204ENST00000594806 ZNF541Q9H0D2 1346 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 WDR90Q96KV7 1748 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 G3V3G9 751 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 EYA2O00167 538 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 SRGAP3O43295 1099 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 DCAF8Q5TAQ9 597 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 COPRSQ9NQ92 184 aa32.1■■■□□ 2.73
TRIM28-204ENST00000594806 CIAO1O76071 339 aa32.09■■■□□ 2.73
TRIM28-204ENST00000594806 C15orf52Q6ZUT6 534 aaKnown RBP32.09■■■□□ 2.73
TRIM28-204ENST00000594806 COG6Q9Y2V7 657 aa32.09■■■□□ 2.73
TRIM28-204ENST00000594806 TAF5LO75529 589 aa32.08■■■□□ 2.73
TRIM28-204ENST00000594806 DDNO94850 711 aaPredicted RBP32.08■■■□□ 2.73
TRIM28-204ENST00000594806 UBE4AQ14139 1066 aa32.08■■■□□ 2.73
TRIM28-204ENST00000594806 TNIP1Q15025 636 aa32.08■■■□□ 2.73
TRIM28-204ENST00000594806 LRRC24Q50LG9 513 aa32.08■■■□□ 2.73
TRIM28-204ENST00000594806 HELBQ8NG08 1087 aaPredicted RBP32.08■■■□□ 2.73
TRIM28-204ENST00000594806 KLHDC4Q8TBB5 520 aa32.08■■■□□ 2.73
TRIM28-204ENST00000594806 L3MBTL3Q96JM7 780 aaPredicted RBP32.08■■■□□ 2.73
TRIM28-204ENST00000594806 GPR101Q96P66 508 aaPredicted RBP32.08■■■□□ 2.73
TRIM28-204ENST00000594806 ECE2O60344 883 aa32.07■■■□□ 2.72
TRIM28-204ENST00000594806 PODNQ7Z5L7 613 aa32.07■■■□□ 2.72
TRIM28-204ENST00000594806 DBNDD1Q9H9R9 158 aa32.07■■■□□ 2.72
TRIM28-204ENST00000594806 VEGFAP15692 232 aaPredicted RBP32.06■■■□□ 2.72
TRIM28-204ENST00000594806 ATP8B2P98198 1209 aa32.06■■■□□ 2.72
TRIM28-204ENST00000594806 CXCL9Q07325 125 aa32.06■■■□□ 2.72
TRIM28-204ENST00000594806 METTL24Q5JXM2 366 aa32.06■■■□□ 2.72
TRIM28-204ENST00000594806 CIAPIN1Q6FI81 312 aa32.06■■■□□ 2.72
TRIM28-204ENST00000594806 DOK7Q18PE1 504 aa32.05■■■□□ 2.72
TRIM28-204ENST00000594806 COA1Q9GZY4 146 aa32.05■■■□□ 2.72
TRIM28-204ENST00000594806 RRAGCQ9HB90 399 aa32.05■■■□□ 2.72
TRIM28-204ENST00000594806 NMRK2Q9NPI5 230 aa32.05■■■□□ 2.72
TRIM28-204ENST00000594806 SCN4AP35499 1836 aa32.05■■■□□ 2.72
TRIM28-204ENST00000594806 IQCA1LA6NCM1 817 aa32.04■■■□□ 2.72
TRIM28-204ENST00000594806 WTIPA6NIX2 430 aaPredicted RBP32.04■■■□□ 2.72
TRIM28-204ENST00000594806 YDJCA8MPS7 323 aa32.04■■■□□ 2.72
TRIM28-204ENST00000594806 PDE8BO95263 885 aa32.04■■■□□ 2.72
TRIM28-204ENST00000594806 RRP1P56182 461 aaKnown RBP32.04■■■□□ 2.72
TRIM28-204ENST00000594806 IL15P40933 162 aaPredicted RBP32.03■■■□□ 2.72
TRIM28-204ENST00000594806 C20orf194Q5TEA3 1177 aa32.02■■■□□ 2.72
TRIM28-204ENST00000594806 ATG9AQ7Z3C6 839 aa32.02■■■□□ 2.72
TRIM28-204ENST00000594806 VGLL2Q8N8G2 317 aa32.02■■■□□ 2.72
TRIM28-204ENST00000594806 ZBTB40Q9NUA8 1239 aa32.02■■■□□ 2.72
TRIM28-204ENST00000594806 GJA3Q9Y6H8 435 aa32.02■■■□□ 2.72
TRIM28-204ENST00000594806 KIF3CO14782 793 aa32.01■■■□□ 2.71
TRIM28-204ENST00000594806 POLA2Q14181 598 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms