RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
GTF2F1-202ENST00000593678 SEC31BQ9NQW1 1179 aa18.12■□□□□ 0.49
GTF2F1-202ENST00000593678 DIAPH3Q9NSV4 1193 aa18.12■□□□□ 0.49
GTF2F1-202ENST00000593678 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
GTF2F1-202ENST00000593678 ST5P78524 1137 aa18.12■□□□□ 0.49
GTF2F1-202ENST00000593678 RUFY2Q8WXA3 655 aa18.12■□□□□ 0.49
GTF2F1-202ENST00000593678 PDE8BO95263 885 aa18.11■□□□□ 0.49
GTF2F1-202ENST00000593678 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
GTF2F1-202ENST00000593678 RIC1Q4ADV7 1423 aa18.11■□□□□ 0.49
GTF2F1-202ENST00000593678 LRP5O75197 1615 aa18.11■□□□□ 0.49
GTF2F1-202ENST00000593678 PUM3Q15397 648 aaKnown RBP18.1■□□□□ 0.49
GTF2F1-202ENST00000593678 TTC39AQ5SRH9 613 aa18.1■□□□□ 0.49
GTF2F1-202ENST00000593678 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
GTF2F1-202ENST00000593678 DNAJC2Q99543 621 aaKnown RBP18.1■□□□□ 0.49
GTF2F1-202ENST00000593678 ESYT1Q9BSJ8 1104 aa18.1■□□□□ 0.49
GTF2F1-202ENST00000593678 FSD1Q9BTV5 496 aa18.1■□□□□ 0.49
GTF2F1-202ENST00000593678 BAG6P46379 1132 aa18.09■□□□□ 0.49
GTF2F1-202ENST00000593678 DDX46Q7L014 1031 aaKnown RBP18.09■□□□□ 0.49
GTF2F1-202ENST00000593678 XAGE2Q96GT9 111 aa18.09■□□□□ 0.49
GTF2F1-202ENST00000593678 SERPINB2P05120 415 aa18.09■□□□□ 0.49
GTF2F1-202ENST00000593678 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
GTF2F1-202ENST00000593678 IFIT1P09914 478 aaKnown RBP18.08■□□□□ 0.48
GTF2F1-202ENST00000593678 SLC5A1P13866 664 aa18.08■□□□□ 0.48
GTF2F1-202ENST00000593678 EN1Q05925 392 aaPredicted RBP18.08■□□□□ 0.48
GTF2F1-202ENST00000593678 LPIN2Q92539 896 aa18.08■□□□□ 0.48
GTF2F1-202ENST00000593678 HAUS7Q99871 368 aa18.08■□□□□ 0.48
GTF2F1-202ENST00000593678 STK32BQ9NY57 414 aa18.08■□□□□ 0.48
GTF2F1-202ENST00000593678 SPEF2Q9C093 1822 aa18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 C3orf67Q6ZVT6 689 aa18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 COL23A1Q86Y22 540 aaPredicted RBP18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 CCDC24Q8N4L8 307 aa18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 VGLL2Q8N8G2 317 aa18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 ANO2Q9NQ90 1003 aa18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
GTF2F1-202ENST00000593678 MCCP23508 829 aa18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 TM4SF1P30408 202 aa18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 BECN1Q14457 450 aa18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 EZH2Q15910 746 aaKnown RBP18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 CWC27Q6UX04 472 aaKnown RBP18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 HELBQ8NG08 1087 aaPredicted RBP18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 CAMKK2Q96RR4 588 aa18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 CASZ1Q86V15 1759 aa18.06■□□□□ 0.48
GTF2F1-202ENST00000593678 ADORA1P30542 326 aa18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 RPS8P62241 208 aaKnown RBP18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 CHRNDQ07001 517 aa18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 LRRFIP1Q32MZ4 808 aaKnown RBP18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 USP26Q9BXU7 913 aa18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 PAG1Q9NWQ8 432 aa18.05■□□□□ 0.48
GTF2F1-202ENST00000593678 RFX7Q2KHR2 1363 aa18.04■□□□□ 0.48
GTF2F1-202ENST00000593678 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 GOLIM4O00461 696 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 TAF5LO75529 589 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 FKBP4Q02790 459 aaKnown RBP eCLIP18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 TICAM2Q86XR7 235 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 SGSM2O43147 1006 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 EPB41L2O43491 1005 aaKnown RBP18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 UQCRFS1P1P0C7P4 283 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 CELF1Q92879 486 aaKnown RBP18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 ANKRD2Q9GZV1 360 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
GTF2F1-202ENST00000593678 RAD50Q92878 1312 aa18.02■□□□□ 0.48
GTF2F1-202ENST00000593678 KCNJ4P48050 445 aa18.02■□□□□ 0.48
GTF2F1-202ENST00000593678 DDR1Q08345 913 aa18.02■□□□□ 0.48
GTF2F1-202ENST00000593678 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
GTF2F1-202ENST00000593678 FGFR2P21802 821 aa18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 ZNF512BQ96KM6 892 aaPredicted RBP18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 NDUFB9Q9Y6M9 179 aa18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 TNRC6CQ9HCJ0 1690 aaKnown RBP18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 GRAPQ13588 217 aa18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 CCDC102BQ68D86 513 aa18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 GRAPLQ8TC17 118 aaPredicted RBP18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 EDC3Q96F86 508 aaKnown RBP18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 MINPP1Q9UNW1 487 aa18.01■□□□□ 0.47
GTF2F1-202ENST00000593678 ARAP2Q8WZ64 1704 aa18■□□□□ 0.47
GTF2F1-202ENST00000593678 NMIQ13287 307 aaPredicted RBP18■□□□□ 0.47
GTF2F1-202ENST00000593678 UBE4AQ14139 1066 aa18■□□□□ 0.47
GTF2F1-202ENST00000593678 TTF1Q15361 905 aaPredicted RBP18■□□□□ 0.47
GTF2F1-202ENST00000593678 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
GTF2F1-202ENST00000593678 MMP10P09238 476 aa17.99■□□□□ 0.47
GTF2F1-202ENST00000593678 CAVIN4Q5BKX8 364 aa17.99■□□□□ 0.47
GTF2F1-202ENST00000593678 CCDC125Q86Z20 511 aa17.99■□□□□ 0.47
GTF2F1-202ENST00000593678 SNRKQ9NRH2 765 aa17.99■□□□□ 0.47
GTF2F1-202ENST00000593678 GNL3LQ9NVN8 582 aaKnown RBP17.99■□□□□ 0.47
GTF2F1-202ENST00000593678 TAF1P21675 1872 aa17.99■□□□□ 0.47
GTF2F1-202ENST00000593678 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 ARID4AP29374 1257 aaPredicted RBP17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 PHKA1P46020 1223 aa17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
GTF2F1-202ENST00000593678 ZAP70P43403 619 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms