RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GLIS2Q9BZE0 524 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-243ENST00000593128 WDR33Q9C0J8 1336 aaKnown RBP23.04■■□□□ 1.28
CIRBP-243ENST00000593128 UFL1O94874 794 aa23.03■■□□□ 1.28
CIRBP-243ENST00000593128 KSR2Q6VAB6 950 aa23.03■■□□□ 1.28
CIRBP-243ENST00000593128 ZC3H12CQ9C0D7 883 aaKnown RBP23.03■■□□□ 1.28
CIRBP-243ENST00000593128 CDHR2Q9BYE9 1310 aa23.03■■□□□ 1.28
CIRBP-243ENST00000593128 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
CIRBP-243ENST00000593128 CCDC27Q2M243 656 aa23.02■■□□□ 1.28
CIRBP-243ENST00000593128 CST9Q5W186 159 aa23.02■■□□□ 1.28
CIRBP-243ENST00000593128 KCNQ5Q9NR82 932 aa23.02■■□□□ 1.28
CIRBP-243ENST00000593128 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-243ENST00000593128 CELF2O95319 508 aaKnown RBP23.01■■□□□ 1.27
CIRBP-243ENST00000593128 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
CIRBP-243ENST00000593128 HIRAP54198 1017 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-243ENST00000593128 CWF19L2Q2TBE0 894 aaKnown RBP23.01■■□□□ 1.27
CIRBP-243ENST00000593128 RBM26Q5T8P6 1007 aaKnown RBP23.01■■□□□ 1.27
CIRBP-243ENST00000593128 CYP4F22Q6NT55 531 aa23.01■■□□□ 1.27
CIRBP-243ENST00000593128 G2E3Q7L622 706 aa23.01■■□□□ 1.27
CIRBP-243ENST00000593128 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
CIRBP-243ENST00000593128 GGA1Q9UJY5 639 aa23.01■■□□□ 1.27
CIRBP-243ENST00000593128 IGKV5-2P06315 115 aa23■■□□□ 1.27
CIRBP-243ENST00000593128 TBC1D10BQ4KMP7 808 aaPredicted RBP23■■□□□ 1.27
CIRBP-243ENST00000593128 SAMD7Q7Z3H4 446 aa23■■□□□ 1.27
CIRBP-243ENST00000593128 CTCFP49711 727 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-243ENST00000593128 CAPNS2Q96L46 248 aa22.99■■□□□ 1.27
CIRBP-243ENST00000593128 MYH3P11055 1940 aa22.98■■□□□ 1.27
CIRBP-243ENST00000593128 ECE1P42892 770 aa22.98■■□□□ 1.27
CIRBP-243ENST00000593128 CTSWP56202 376 aa22.98■■□□□ 1.27
CIRBP-243ENST00000593128 CDC37L1Q7L3B6 337 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 USP48Q86UV5 1035 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 WBP1LQ9NX94 342 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 PODXL2Q9NZ53 605 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 TLL2Q9Y6L7 1015 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 RTL9Q8NET4 1388 aa22.97■■□□□ 1.27
CIRBP-243ENST00000593128 NEURL1BA8MQ27 555 aa22.96■■□□□ 1.27
CIRBP-243ENST00000593128 FKBP5Q13451 457 aaPredicted RBP22.96■■□□□ 1.27
CIRBP-243ENST00000593128 UBE3BQ7Z3V4 1068 aa22.96■■□□□ 1.27
CIRBP-243ENST00000593128 ZC3H15Q8WU90 426 aaKnown RBP22.96■■□□□ 1.27
CIRBP-243ENST00000593128 DPF2Q92785 391 aa22.96■■□□□ 1.27
CIRBP-243ENST00000593128 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
CIRBP-243ENST00000593128 IL16Q14005 1332 aa22.96■■□□□ 1.27
CIRBP-243ENST00000593128 SCN9AQ15858 1988 aa22.96■■□□□ 1.27
CIRBP-243ENST00000593128 EGFRP00533 1210 aa22.95■■□□□ 1.26
CIRBP-243ENST00000593128 XDHP47989 1333 aa22.95■■□□□ 1.26
CIRBP-243ENST00000593128 LBX1P52954 281 aa22.95■■□□□ 1.26
CIRBP-243ENST00000593128 MAP2K1Q02750 393 aaPredicted RBP22.95■■□□□ 1.26
CIRBP-243ENST00000593128 DLK2Q6UY11 383 aa22.95■■□□□ 1.26
CIRBP-243ENST00000593128 GREM2Q9H772 168 aa22.95■■□□□ 1.26
CIRBP-243ENST00000593128 RPS12P25398 132 aaKnown RBP22.94■■□□□ 1.26
CIRBP-243ENST00000593128 FLIIQ13045 1269 aa22.94■■□□□ 1.26
CIRBP-243ENST00000593128 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
CIRBP-243ENST00000593128 BEGAINQ9BUH8 593 aa22.94■■□□□ 1.26
CIRBP-243ENST00000593128 PGAP2Q9UHJ9 254 aa22.94■■□□□ 1.26
CIRBP-243ENST00000593128 AOC2O75106 756 aa22.93■■□□□ 1.26
CIRBP-243ENST00000593128 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
CIRBP-243ENST00000593128 ATP2B4P23634 1241 aa22.92■■□□□ 1.26
CIRBP-243ENST00000593128 EXOSC9Q06265 439 aaKnown RBP22.92■■□□□ 1.26
CIRBP-243ENST00000593128 KIF4BQ2VIQ3 1234 aa22.92■■□□□ 1.26
CIRBP-243ENST00000593128 KRT26Q7Z3Y9 468 aa22.92■■□□□ 1.26
CIRBP-243ENST00000593128 SAPCD2Q86UD0 394 aa22.92■■□□□ 1.26
CIRBP-243ENST00000593128 FBXW7Q969H0 707 aa22.92■■□□□ 1.26
CIRBP-243ENST00000593128 DCPSQ96C86 337 aaKnown RBP22.92■■□□□ 1.26
CIRBP-243ENST00000593128 PRDM10Q9NQV6 1147 aa22.92■■□□□ 1.26
CIRBP-243ENST00000593128 POLR2AP24928 1970 aaKnown RBP22.91■■□□□ 1.26
CIRBP-243ENST00000593128 ADM5C9JUS6 153 aa22.91■■□□□ 1.26
CIRBP-243ENST00000593128 WTIPA6NIX2 430 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-243ENST00000593128 VIL1P09327 827 aaKnown RBP22.9■■□□□ 1.26
CIRBP-243ENST00000593128 HSPA8P11142 646 aaKnown RBP22.9■■□□□ 1.26
CIRBP-243ENST00000593128 GCKRQ14397 625 aa22.9■■□□□ 1.26
CIRBP-243ENST00000593128 WDR63Q8IWG1 891 aa22.9■■□□□ 1.26
CIRBP-243ENST00000593128 DNAAF4Q8WXU2 420 aa22.9■■□□□ 1.26
CIRBP-243ENST00000593128 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
CIRBP-243ENST00000593128 H7C1W4 665 aa22.89■■□□□ 1.25
CIRBP-243ENST00000593128 IGHMBP2P38935 993 aaKnown RBP22.89■■□□□ 1.25
CIRBP-243ENST00000593128 MINPP1Q9UNW1 487 aa22.89■■□□□ 1.25
CIRBP-243ENST00000593128 THSD7BQ9C0I4 1608 aa22.89■■□□□ 1.25
CIRBP-243ENST00000593128 VAMP4O75379 141 aa22.88■■□□□ 1.25
CIRBP-243ENST00000593128 RSBN1LQ6PCB5 846 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-243ENST00000593128 BSDC1Q9NW68 430 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-243ENST00000593128 GGA3Q9NZ52 723 aa22.88■■□□□ 1.25
CIRBP-243ENST00000593128 TSKSQ9UJT2 592 aa22.88■■□□□ 1.25
CIRBP-243ENST00000593128 CACNA1FO60840 1977 aa22.88■■□□□ 1.25
CIRBP-243ENST00000593128 PSME4Q14997 1843 aa22.87■■□□□ 1.25
CIRBP-243ENST00000593128 ASTN2O75129 1339 aaPredicted RBP22.87■■□□□ 1.25
CIRBP-243ENST00000593128 HUNKP57058 714 aa22.87■■□□□ 1.25
CIRBP-243ENST00000593128 FAM161AQ3B820 660 aa22.87■■□□□ 1.25
CIRBP-243ENST00000593128 NCBP3Q53F19 620 aaKnown RBP22.87■■□□□ 1.25
CIRBP-243ENST00000593128 USP17L3A6NCW0 530 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 USP17L4A6NCW7 530 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 ITGA6P23229 1130 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 CCT4P50991 539 aaKnown RBP22.86■■□□□ 1.25
CIRBP-243ENST00000593128 USP17L1Q7RTZ2 530 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 SULF1Q8IWU6 871 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 MPHOSPH8Q99549 860 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 CHMP3Q9Y3E7 222 aa22.86■■□□□ 1.25
CIRBP-243ENST00000593128 F6X3S4 739 aa22.85■■□□□ 1.25
CIRBP-243ENST00000593128 LINS1Q8NG48 757 aa22.85■■□□□ 1.25
CIRBP-243ENST00000593128 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
CIRBP-243ENST00000593128 MAP2K2P36507 400 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms