RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-218ENST00000592158 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
SMARCA4-218ENST00000592158 FOSL2P15408 326 aa12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 SYN1P17600 705 aa12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 HOXA10P31260 410 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 DZIP3Q86Y13 1208 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
SMARCA4-218ENST00000592158 CCL5P13501 91 aa12.3□□□□□ -0.44
SMARCA4-218ENST00000592158 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-218ENST00000592158 SCARF1Q14162 830 aa12.3□□□□□ -0.44
SMARCA4-218ENST00000592158 RNF208Q9H0X6 261 aa12.3□□□□□ -0.44
SMARCA4-218ENST00000592158 SEMA6BQ9H3T3 888 aa12.3□□□□□ -0.44
SMARCA4-218ENST00000592158 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
SMARCA4-218ENST00000592158 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-218ENST00000592158 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMARCA4-218ENST00000592158 ZSWIM8A7E2V4 1837 aa12.29□□□□□ -0.44
SMARCA4-218ENST00000592158 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
SMARCA4-218ENST00000592158 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 DPP8Q6V1X1 898 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 CRAMP1Q96RY5 1269 aa12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 ABCC12Q96J65 1359 aa12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 LAMB1P07942 1786 aa12.28□□□□□ -0.44
SMARCA4-218ENST00000592158 COL2A1P02458 1487 aaPredicted RBP12.27□□□□□ -0.44
SMARCA4-218ENST00000592158 SSC5DA1L4H1 1573 aa12.27□□□□□ -0.44
SMARCA4-218ENST00000592158 NF2P35240 595 aa12.27□□□□□ -0.45
SMARCA4-218ENST00000592158 FOXK2Q01167 660 aa12.27□□□□□ -0.45
SMARCA4-218ENST00000592158 PRKG1Q13976 671 aa12.27□□□□□ -0.45
SMARCA4-218ENST00000592158 ARMC9Q7Z3E5 817 aa12.27□□□□□ -0.45
SMARCA4-218ENST00000592158 ATP6V0A2Q9Y487 856 aa12.27□□□□□ -0.45
SMARCA4-218ENST00000592158 SGPL1O95470 568 aa12.26□□□□□ -0.45
SMARCA4-218ENST00000592158 A1BGP04217 495 aa12.26□□□□□ -0.45
SMARCA4-218ENST00000592158 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-218ENST00000592158 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-218ENST00000592158 ARHGAP39Q9C0H5 1083 aa12.26□□□□□ -0.45
SMARCA4-218ENST00000592158 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 ZBTB48P10074 688 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 PRMT2P55345 433 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 EIF4A2Q14240 407 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 TMEM31Q5JXX7 168 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 LDLRAD1Q5T700 205 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 ASB2Q96Q27 587 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 CACNA1BQ00975 2339 aa12.25□□□□□ -0.45
SMARCA4-218ENST00000592158 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 GRK4P32298 578 aa12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 PAWRQ96IZ0 340 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 WNK4Q96J92 1243 aa12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 PTPN18Q99952 460 aa12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 BAHCC1Q9P281 2608 aa12.24□□□□□ -0.45
SMARCA4-218ENST00000592158 ZDBF2Q9HCK1 2354 aa12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 RGL2O15211 777 aa12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 TFRCP02786 760 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 KIF22Q14807 665 aa12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 EPHX3Q9H6B9 360 aa12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 DBNDD1Q9H9R9 158 aa12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 ANGEL1Q9UNK9 670 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-218ENST00000592158 TCF20Q9UGU0 1960 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-218ENST00000592158 UBXN2AP68543 259 aa12.22□□□□□ -0.45
SMARCA4-218ENST00000592158 COL26A1Q96A83 441 aa12.22□□□□□ -0.45
SMARCA4-218ENST00000592158 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-218ENST00000592158 KCNQ5Q9NR82 932 aa12.22□□□□□ -0.45
SMARCA4-218ENST00000592158 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
SMARCA4-218ENST00000592158 RTL9Q8NET4 1388 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 FAM205AQ6ZU69 1335 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 GNRH1P01148 92 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 UNC93B1Q9H1C4 597 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 TTYH1Q9H313 450 aaPredicted RBP12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 ZFYVE28Q9HCC9 887 aa12.21□□□□□ -0.45
SMARCA4-218ENST00000592158 CFAP54Q96N23 3096 aa12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 ZNF280AP59817 542 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 LACTBP83111 547 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 NECAB3Q96P71 396 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 NYXQ9GZU5 481 aa12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 FZD1Q9UP38 647 aa12.2□□□□□ -0.46
SMARCA4-218ENST00000592158 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 MDM2Q00987 491 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 DIS3LQ8TF46 1054 aaKnown RBP12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 THEGQ9P2T0 379 aa12.19□□□□□ -0.46
SMARCA4-218ENST00000592158 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms