RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 POLRMTO00411 1230 aaKnown RBP13.92□□□□□ -0.18
TUBD1-211ENST00000591548 ERC2O15083 957 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 MAP4K4O95819 1239 aaPredicted RBP13.92□□□□□ -0.18
TUBD1-211ENST00000591548 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 NLGN1Q8N2Q7 840 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 NEUROD6Q96NK8 337 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
TUBD1-211ENST00000591548 TRIM6-TRIM34B2RNG4 842 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 NPHP1O15259 732 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 MPHOSPH8Q99549 860 aa13.92□□□□□ -0.18
TUBD1-211ENST00000591548 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
TUBD1-211ENST00000591548 PDE8BO95263 885 aa13.91□□□□□ -0.18
TUBD1-211ENST00000591548 IGHMBP2P38935 993 aaKnown RBP13.91□□□□□ -0.18
TUBD1-211ENST00000591548 CDC5LQ99459 802 aaKnown RBP13.91□□□□□ -0.18
TUBD1-211ENST00000591548 STK32BQ9NY57 414 aa13.91□□□□□ -0.18
TUBD1-211ENST00000591548 AKAP2Q9Y2D5 859 aa13.91□□□□□ -0.18
TUBD1-211ENST00000591548 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
TUBD1-211ENST00000591548 ATP5JP18859 108 aa13.9□□□□□ -0.18
TUBD1-211ENST00000591548 TAF1P21675 1872 aa13.9□□□□□ -0.18
TUBD1-211ENST00000591548 CELF1Q92879 486 aaKnown RBP13.9□□□□□ -0.18
TUBD1-211ENST00000591548 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
TUBD1-211ENST00000591548 ADORA1P30542 326 aa13.89□□□□□ -0.19
TUBD1-211ENST00000591548 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
TUBD1-211ENST00000591548 ATP2B3Q16720 1220 aa13.89□□□□□ -0.19
TUBD1-211ENST00000591548 CCDC125Q86Z20 511 aa13.89□□□□□ -0.19
TUBD1-211ENST00000591548 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
TUBD1-211ENST00000591548 HELBQ8NG08 1087 aaPredicted RBP13.89□□□□□ -0.19
TUBD1-211ENST00000591548 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
TUBD1-211ENST00000591548 ST5P78524 1137 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 CNTROBQ8N137 903 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 XAGE2Q96GT9 111 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 BSDC1Q9NW68 430 aaPredicted RBP13.88□□□□□ -0.19
TUBD1-211ENST00000591548 QSER1Q2KHR3 1735 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 NRXN2Q9P2S2 1712 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 TAF5LO75529 589 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 FGFR2P21802 821 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 CHMLP26374 656 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 RPS8P62241 208 aaKnown RBP13.88□□□□□ -0.19
TUBD1-211ENST00000591548 CRY2Q49AN0 593 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
TUBD1-211ENST00000591548 SNAP23O00161 211 aa13.87□□□□□ -0.19
TUBD1-211ENST00000591548 MMP10P09238 476 aa13.87□□□□□ -0.19
TUBD1-211ENST00000591548 CHRNDQ07001 517 aa13.87□□□□□ -0.19
TUBD1-211ENST00000591548 PUM3Q15397 648 aaKnown RBP13.87□□□□□ -0.19
TUBD1-211ENST00000591548 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
TUBD1-211ENST00000591548 DDX46Q7L014 1031 aaKnown RBP13.87□□□□□ -0.19
TUBD1-211ENST00000591548 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
TUBD1-211ENST00000591548 KLRG2A4D1S0 409 aaPredicted RBP13.86□□□□□ -0.19
TUBD1-211ENST00000591548 LPIN2Q92539 896 aa13.86□□□□□ -0.19
TUBD1-211ENST00000591548 EDC3Q96F86 508 aaKnown RBP13.86□□□□□ -0.19
TUBD1-211ENST00000591548 HAUS7Q99871 368 aa13.86□□□□□ -0.19
TUBD1-211ENST00000591548 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
TUBD1-211ENST00000591548 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
TUBD1-211ENST00000591548 MINPP1Q9UNW1 487 aa13.86□□□□□ -0.19
TUBD1-211ENST00000591548 NDUFB9Q9Y6M9 179 aa13.86□□□□□ -0.19
TUBD1-211ENST00000591548 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
TUBD1-211ENST00000591548 TBC1D32Q96NH3 1257 aa13.85□□□□□ -0.19
TUBD1-211ENST00000591548 PARP3Q9Y6F1 533 aa13.85□□□□□ -0.19
TUBD1-211ENST00000591548 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
TUBD1-211ENST00000591548 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
TUBD1-211ENST00000591548 CCDC158Q5M9N0 1113 aa13.84□□□□□ -0.19
TUBD1-211ENST00000591548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.84□□□□□ -0.19
TUBD1-211ENST00000591548 ESYT1Q9BSJ8 1104 aa13.84□□□□□ -0.19
TUBD1-211ENST00000591548 A0A1B0GUL6 1792 aa13.84□□□□□ -0.19
TUBD1-211ENST00000591548 IFIT1P09914 478 aaKnown RBP13.83□□□□□ -0.19
TUBD1-211ENST00000591548 GRAPQ13588 217 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 SCARF1Q14162 830 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 TTC39AQ5SRH9 613 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 GRAPLQ8TC17 118 aaPredicted RBP13.83□□□□□ -0.19
TUBD1-211ENST00000591548 RPGRQ92834 1020 aaKnown RBP13.83□□□□□ -0.19
TUBD1-211ENST00000591548 DNAJC2Q99543 621 aaKnown RBP13.83□□□□□ -0.19
TUBD1-211ENST00000591548 BRIP1Q9BX63 1249 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 C22orf23Q9BZE7 217 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 IL25Q9H293 177 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 ARAP2Q8WZ64 1704 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.19
TUBD1-211ENST00000591548 SLC5A1P13866 664 aa13.83□□□□□ -0.2
TUBD1-211ENST00000591548 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
TUBD1-211ENST00000591548 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
TUBD1-211ENST00000591548 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
TUBD1-211ENST00000591548 PHKA1P46020 1223 aa13.82□□□□□ -0.2
TUBD1-211ENST00000591548 SLC51AQ86UW1 340 aa13.82□□□□□ -0.2
TUBD1-211ENST00000591548 RBM17Q96I25 401 aaKnown RBP13.82□□□□□ -0.2
TUBD1-211ENST00000591548 FSD1Q9BTV5 496 aa13.82□□□□□ -0.2
TUBD1-211ENST00000591548 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
TUBD1-211ENST00000591548 PAG1Q9NWQ8 432 aa13.82□□□□□ -0.2
TUBD1-211ENST00000591548 GOLIM4O00461 696 aa13.81□□□□□ -0.2
TUBD1-211ENST00000591548 EIF5BO60841 1220 aaKnown RBP13.81□□□□□ -0.2
TUBD1-211ENST00000591548 ANP32AP39687 249 aaKnown RBP13.81□□□□□ -0.2
TUBD1-211ENST00000591548 MCAMP43121 646 aa13.81□□□□□ -0.2
TUBD1-211ENST00000591548 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
TUBD1-211ENST00000591548 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
TUBD1-211ENST00000591548 CWC27Q6UX04 472 aaKnown RBP13.81□□□□□ -0.2
TUBD1-211ENST00000591548 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
TUBD1-211ENST00000591548 SGSM2O43147 1006 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 REC8O95072 547 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 ARID4AP29374 1257 aaPredicted RBP13.8□□□□□ -0.2
TUBD1-211ENST00000591548 PI16Q6UXB8 463 aa13.8□□□□□ -0.2
TUBD1-211ENST00000591548 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms