RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 MOB2Q70IA6 237 aa14.53□□□□□ -0.08
ZNF540-209ENST00000590588 ZC3H12CQ9C0D7 883 aaKnown RBP14.53□□□□□ -0.08
ZNF540-209ENST00000590588 DUOX1Q9NRD9 1551 aa14.52□□□□□ -0.08
ZNF540-209ENST00000590588 G3V3G9 751 aa14.52□□□□□ -0.09
ZNF540-209ENST00000590588 GPSM2P81274 684 aa14.52□□□□□ -0.09
ZNF540-209ENST00000590588 TTLL12Q14166 644 aaPredicted RBP14.52□□□□□ -0.09
ZNF540-209ENST00000590588 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.09
ZNF540-209ENST00000590588 AGBL3Q8NEM8 1001 aa14.52□□□□□ -0.09
ZNF540-209ENST00000590588 THUMPD2Q9BTF0 503 aaKnown RBP14.52□□□□□ -0.09
ZNF540-209ENST00000590588 TRIM17Q9Y577 477 aa14.52□□□□□ -0.09
ZNF540-209ENST00000590588 CLSPNQ9HAW4 1339 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 ALDH1A1P00352 501 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 TCIRG1Q13488 830 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 LRP10Q7Z4F1 713 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 TBC1D16Q8TBP0 767 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 CELF1Q92879 486 aaKnown RBP14.51□□□□□ -0.09
ZNF540-209ENST00000590588 R3HDMLQ9H3Y0 253 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 COLQQ9Y215 455 aaPredicted RBP14.51□□□□□ -0.09
ZNF540-209ENST00000590588 ANKRD36CQ5JPF3 1778 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 PAPPA2Q9BXP8 1791 aa14.51□□□□□ -0.09
ZNF540-209ENST00000590588 CENPFP49454 3210 aa14.5□□□□□ -0.09
ZNF540-209ENST00000590588 NEFMP07197 916 aa14.5□□□□□ -0.09
ZNF540-209ENST00000590588 EIF2S2P20042 333 aaKnown RBP14.5□□□□□ -0.09
ZNF540-209ENST00000590588 NF2P35240 595 aa14.5□□□□□ -0.09
ZNF540-209ENST00000590588 MKRN3Q13064 507 aaKnown RBP14.5□□□□□ -0.09
ZNF540-209ENST00000590588 PDIA6Q15084 440 aa14.5□□□□□ -0.09
ZNF540-209ENST00000590588 RSBN1LQ6PCB5 846 aaPredicted RBP14.5□□□□□ -0.09
ZNF540-209ENST00000590588 MYOZ2Q9NPC6 264 aa14.5□□□□□ -0.09
ZNF540-209ENST00000590588 BRCA2P51587 3418 aa14.49□□□□□ -0.09
ZNF540-209ENST00000590588 USP17L8P0C7I0 530 aa14.49□□□□□ -0.09
ZNF540-209ENST00000590588 SF3B3Q15393 1217 aaKnown RBP14.49□□□□□ -0.09
ZNF540-209ENST00000590588 COPS6Q7L5N1 327 aa14.49□□□□□ -0.09
ZNF540-209ENST00000590588 OTOP1Q7RTM1 612 aa14.49□□□□□ -0.09
ZNF540-209ENST00000590588 DLL1O00548 723 aa14.48□□□□□ -0.09
ZNF540-209ENST00000590588 EN2P19622 333 aaPredicted RBP14.48□□□□□ -0.09
ZNF540-209ENST00000590588 INHBEP58166 350 aa14.48□□□□□ -0.09
ZNF540-209ENST00000590588 AIMP1Q12904 312 aaKnown RBP14.48□□□□□ -0.09
ZNF540-209ENST00000590588 PRAMEF18Q5VWM3 479 aa14.48□□□□□ -0.09
ZNF540-209ENST00000590588 RPS8P62241 208 aaKnown RBP14.47□□□□□ -0.09
ZNF540-209ENST00000590588 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
ZNF540-209ENST00000590588 TMEM106CQ9BVX2 250 aa14.47□□□□□ -0.09
ZNF540-209ENST00000590588 PODXL2Q9NZ53 605 aa14.47□□□□□ -0.09
ZNF540-209ENST00000590588 SCAF8Q9UPN6 1271 aaKnown RBP14.47□□□□□ -0.09
ZNF540-209ENST00000590588 PTPN22Q9Y2R2 807 aa14.47□□□□□ -0.09
ZNF540-209ENST00000590588 SZT2Q5T011 3432 aa14.47□□□□□ -0.09
ZNF540-209ENST00000590588 LAMB2P55268 1798 aa14.47□□□□□ -0.09
ZNF540-209ENST00000590588 ANXA1P04083 346 aa14.46□□□□□ -0.09
ZNF540-209ENST00000590588 PTPN12Q05209 780 aaKnown RBP14.46□□□□□ -0.09
ZNF540-209ENST00000590588 PROSER3Q2NL68 480 aa14.46□□□□□ -0.09
ZNF540-209ENST00000590588 GMLQ99445 158 aa14.46□□□□□ -0.09
ZNF540-209ENST00000590588 HTTP42858 3142 aa14.46□□□□□ -0.09
ZNF540-209ENST00000590588 ZNF609O15014 1411 aa14.46□□□□□ -0.09
ZNF540-209ENST00000590588 LRRC37AA6NMS7 1700 aa14.46□□□□□ -0.1
ZNF540-209ENST00000590588 TAF1P21675 1872 aa14.46□□□□□ -0.1
ZNF540-209ENST00000590588 KDM3BQ7LBC6 1761 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 SPRYD7Q5W111 196 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 XAGE3Q8WTP9 111 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 ARMC5Q96C12 935 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 ERO1AQ96HE7 468 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 ANKIB1Q9P2G1 1089 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 GGA1Q9UJY5 639 aa14.45□□□□□ -0.1
ZNF540-209ENST00000590588 USP17L3A6NCW0 530 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 USP17L4A6NCW7 530 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 MANSC4A6NHS7 340 aaPredicted RBP14.44□□□□□ -0.1
ZNF540-209ENST00000590588 UFL1O94874 794 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 NBPF9Q3BBW0 867 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 USP17L1Q7RTZ2 530 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 SLC17A8Q8NDX2 589 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 FAM89AQ96GI7 184 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 TSPYL4Q9UJ04 414 aa14.44□□□□□ -0.1
ZNF540-209ENST00000590588 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
ZNF540-209ENST00000590588 PODNQ7Z5L7 613 aa14.43□□□□□ -0.1
ZNF540-209ENST00000590588 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
ZNF540-209ENST00000590588 ZNF428Q96B54 188 aa14.43□□□□□ -0.1
ZNF540-209ENST00000590588 OTUD5Q96G74 571 aa14.43□□□□□ -0.1
ZNF540-209ENST00000590588 PRKG1Q13976 671 aa14.42□□□□□ -0.1
ZNF540-209ENST00000590588 LDLRAD1Q5T700 205 aa14.42□□□□□ -0.1
ZNF540-209ENST00000590588 SLC10A4Q96EP9 437 aa14.42□□□□□ -0.1
ZNF540-209ENST00000590588 EFCC1Q9HA90 598 aa14.42□□□□□ -0.1
ZNF540-209ENST00000590588 SCN9AQ15858 1988 aa14.42□□□□□ -0.1
ZNF540-209ENST00000590588 KIAA0100Q14667 2235 aaKnown RBP14.41□□□□□ -0.1
ZNF540-209ENST00000590588 WNT10BO00744 389 aa14.41□□□□□ -0.1
ZNF540-209ENST00000590588 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
ZNF540-209ENST00000590588 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
ZNF540-209ENST00000590588 OTUD7BQ6GQQ9 843 aa14.41□□□□□ -0.1
ZNF540-209ENST00000590588 NBPF11Q86T75 865 aa14.41□□□□□ -0.1
ZNF540-209ENST00000590588 H0YGN5 161 aa14.4□□□□□ -0.1
ZNF540-209ENST00000590588 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
ZNF540-209ENST00000590588 ZBTB48P10074 688 aaPredicted RBP14.4□□□□□ -0.1
ZNF540-209ENST00000590588 MMP14P50281 582 aa14.4□□□□□ -0.1
ZNF540-209ENST00000590588 PLBD2Q8NHP8 589 aa14.4□□□□□ -0.1
ZNF540-209ENST00000590588 CD99L2Q8TCZ2 262 aa14.4□□□□□ -0.1
ZNF540-209ENST00000590588 ISCA1Q9BUE6 129 aa14.4□□□□□ -0.1
ZNF540-209ENST00000590588 BABAM1Q9NWV8 329 aa14.4□□□□□ -0.1
ZNF540-209ENST00000590588 ANGEL1Q9UNK9 670 aaKnown RBP14.4□□□□□ -0.1
ZNF540-209ENST00000590588 SP3Q02447 781 aa14.39□□□□□ -0.11
ZNF540-209ENST00000590588 SLC4A8Q2Y0W8 1093 aa14.39□□□□□ -0.11
ZNF540-209ENST00000590588 RTL5Q5HYW3 569 aaPredicted RBP14.39□□□□□ -0.11
ZNF540-209ENST00000590588 ANKRD13DQ6ZTN6 518 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms