RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
RFX1-206ENST00000589760 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
RFX1-206ENST00000589760 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
RFX1-206ENST00000589760 ALDH1B1P30837 517 aa18.49■□□□□ 0.55
RFX1-206ENST00000589760 CRY2Q49AN0 593 aa18.49■□□□□ 0.55
RFX1-206ENST00000589760 TRMT2AQ8IZ69 625 aaKnown RBP18.49■□□□□ 0.55
RFX1-206ENST00000589760 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
RFX1-206ENST00000589760 ADCY9O60503 1353 aa18.48■□□□□ 0.55
RFX1-206ENST00000589760 POTEJP0CG39 1038 aa18.48■□□□□ 0.55
RFX1-206ENST00000589760 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
RFX1-206ENST00000589760 NEXNQ0ZGT2 675 aa18.48■□□□□ 0.55
RFX1-206ENST00000589760 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
RFX1-206ENST00000589760 CCDC191Q8NCU4 936 aa18.48■□□□□ 0.55
RFX1-206ENST00000589760 RPGRQ92834 1020 aaKnown RBP18.48■□□□□ 0.55
RFX1-206ENST00000589760 POTEB2H3BUK9 544 aa18.47■□□□□ 0.55
RFX1-206ENST00000589760 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
RFX1-206ENST00000589760 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
RFX1-206ENST00000589760 C21orf2O43822 256 aa18.46■□□□□ 0.55
RFX1-206ENST00000589760 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
RFX1-206ENST00000589760 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
RFX1-206ENST00000589760 RBM17Q96I25 401 aaKnown RBP18.46■□□□□ 0.55
RFX1-206ENST00000589760 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
RFX1-206ENST00000589760 EVI5O60447 810 aa18.45■□□□□ 0.54
RFX1-206ENST00000589760 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
RFX1-206ENST00000589760 HOXA10P31260 410 aaPredicted RBP18.45■□□□□ 0.54
RFX1-206ENST00000589760 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
RFX1-206ENST00000589760 SOGA3Q5TF21 947 aa18.45■□□□□ 0.54
RFX1-206ENST00000589760 MAMSTRQ6ZN01 415 aa18.45■□□□□ 0.54
RFX1-206ENST00000589760 ZBTB38Q8NAP3 1195 aaPredicted RBP18.45■□□□□ 0.54
RFX1-206ENST00000589760 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
RFX1-206ENST00000589760 SCUBE2Q9NQ36 999 aa18.45■□□□□ 0.54
RFX1-206ENST00000589760 TIAM2Q8IVF5 1701 aa18.45■□□□□ 0.54
RFX1-206ENST00000589760 CRAMP1Q96RY5 1269 aa18.44■□□□□ 0.54
RFX1-206ENST00000589760 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
RFX1-206ENST00000589760 IGKV5-2P06315 115 aa18.43■□□□□ 0.54
RFX1-206ENST00000589760 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
RFX1-206ENST00000589760 HSP90B1P14625 803 aaKnown RBP18.43■□□□□ 0.54
RFX1-206ENST00000589760 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
RFX1-206ENST00000589760 SPEF2Q9C093 1822 aa18.43■□□□□ 0.54
RFX1-206ENST00000589760 GRXCR2A6NFK2 248 aa18.42■□□□□ 0.54
RFX1-206ENST00000589760 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
RFX1-206ENST00000589760 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
RFX1-206ENST00000589760 ALDH1L2Q3SY69 923 aa18.42■□□□□ 0.54
RFX1-206ENST00000589760 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
RFX1-206ENST00000589760 RASSF7Q02833 373 aa18.41■□□□□ 0.54
RFX1-206ENST00000589760 CWF19L2Q2TBE0 894 aaKnown RBP18.41■□□□□ 0.54
RFX1-206ENST00000589760 C7orf43Q8WVR3 580 aa18.41■□□□□ 0.54
RFX1-206ENST00000589760 F6X3S4 739 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 CCDC93Q567U6 631 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 C9orf131Q5VYM1 1079 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 DDX46Q7L014 1031 aaKnown RBP18.4■□□□□ 0.54
RFX1-206ENST00000589760 GPIHBP1Q8IV16 184 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
RFX1-206ENST00000589760 LINS1Q8NG48 757 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 CDHR2Q9BYE9 1310 aa18.4■□□□□ 0.54
RFX1-206ENST00000589760 NFKBIEO00221 500 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 PDE8AO60658 829 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 LMNB1P20700 586 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
RFX1-206ENST00000589760 SLAIN1Q8ND83 568 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 RNF181Q9P0P0 153 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 ABCC4O15439 1325 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 ZBED9Q6R2W3 1325 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 LTBP3Q9NS15 1303 aa18.39■□□□□ 0.53
RFX1-206ENST00000589760 LRRC37AA6NMS7 1700 aa18.38■□□□□ 0.53
RFX1-206ENST00000589760 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
RFX1-206ENST00000589760 CC2D2BQ6DHV5 1058 aa18.38■□□□□ 0.53
RFX1-206ENST00000589760 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
RFX1-206ENST00000589760 TAOK3Q9H2K8 898 aa18.38■□□□□ 0.53
RFX1-206ENST00000589760 PTPRCP08575 1304 aa18.38■□□□□ 0.53
RFX1-206ENST00000589760 BBOX1O75936 387 aa18.37■□□□□ 0.53
RFX1-206ENST00000589760 GCKRQ14397 625 aa18.37■□□□□ 0.53
RFX1-206ENST00000589760 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
RFX1-206ENST00000589760 RTKN2Q8IZC4 609 aa18.37■□□□□ 0.53
RFX1-206ENST00000589760 BCL2L13Q9BXK5 485 aa18.37■□□□□ 0.53
RFX1-206ENST00000589760 TMX4Q9H1E5 349 aaPredicted RBP18.37■□□□□ 0.53
RFX1-206ENST00000589760 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
RFX1-206ENST00000589760 H7C1W4 665 aa18.36■□□□□ 0.53
RFX1-206ENST00000589760 GRAPQ13588 217 aa18.36■□□□□ 0.53
RFX1-206ENST00000589760 GRIPAP1Q4V328 841 aa18.36■□□□□ 0.53
RFX1-206ENST00000589760 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
RFX1-206ENST00000589760 GRAPLQ8TC17 118 aaPredicted RBP18.36■□□□□ 0.53
RFX1-206ENST00000589760 DDX12PQ92771 950 aa18.36■□□□□ 0.53
RFX1-206ENST00000589760 PCDHGA4Q9Y5G9 962 aa18.36■□□□□ 0.53
RFX1-206ENST00000589760 PRELPP51888 382 aa18.35■□□□□ 0.53
RFX1-206ENST00000589760 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
RFX1-206ENST00000589760 SLC4A10Q6U841 1118 aa18.35■□□□□ 0.53
RFX1-206ENST00000589760 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
RFX1-206ENST00000589760 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
RFX1-206ENST00000589760 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
RFX1-206ENST00000589760 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
RFX1-206ENST00000589760 SP8Q8IXZ3 490 aa18.34■□□□□ 0.53
RFX1-206ENST00000589760 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
RFX1-206ENST00000589760 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
RFX1-206ENST00000589760 ZMYND10O75800 440 aa18.33■□□□□ 0.52
RFX1-206ENST00000589760 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
RFX1-206ENST00000589760 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
RFX1-206ENST00000589760 SRCIN1Q9C0H9 1055 aa18.33■□□□□ 0.52
RFX1-206ENST00000589760 COL4A1P02462 1669 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms