RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-225ENST00000589710 CCDC152Q4G0S7 254 aa24.63■■□□□ 1.53
CIRBP-225ENST00000589710 BCL2L12Q9HB09 334 aa24.63■■□□□ 1.53
CIRBP-225ENST00000589710 RIPOR2Q9Y4F9 1068 aa24.63■■□□□ 1.53
CIRBP-225ENST00000589710 NBR1Q14596 966 aa24.62■■□□□ 1.53
CIRBP-225ENST00000589710 FAM227BQ96M60 508 aa24.62■■□□□ 1.53
CIRBP-225ENST00000589710 ERFEQ4G0M1 354 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 ARHGEF1Q92888 912 aaKnown RBP24.61■■□□□ 1.53
CIRBP-225ENST00000589710 RAD50Q92878 1312 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 LRP5O75197 1615 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 GTF2E1P29083 439 aaPredicted RBP24.61■■□□□ 1.53
CIRBP-225ENST00000589710 ADORA1P30542 326 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 ATP2B3Q16720 1220 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 DDX46Q7L014 1031 aaKnown RBP24.61■■□□□ 1.53
CIRBP-225ENST00000589710 XAGE2Q96GT9 111 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 LSG1Q9H089 658 aaKnown RBP24.61■■□□□ 1.53
CIRBP-225ENST00000589710 SEC31BQ9NQW1 1179 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 PALD1Q9ULE6 856 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 C4AP0C0L4 1744 aa24.61■■□□□ 1.53
CIRBP-225ENST00000589710 RGL2O15211 777 aa24.6■■□□□ 1.53
CIRBP-225ENST00000589710 IFIT1P09914 478 aaKnown RBP24.6■■□□□ 1.53
CIRBP-225ENST00000589710 CCDC158Q5M9N0 1113 aa24.6■■□□□ 1.53
CIRBP-225ENST00000589710 TTC39AQ5SRH9 613 aa24.6■■□□□ 1.53
CIRBP-225ENST00000589710 CCDC125Q86Z20 511 aa24.6■■□□□ 1.53
CIRBP-225ENST00000589710 EPB41L2O43491 1005 aaKnown RBP24.59■■□□□ 1.53
CIRBP-225ENST00000589710 RFC4P35249 363 aa24.59■■□□□ 1.53
CIRBP-225ENST00000589710 SETDB2Q96T68 719 aa24.59■■□□□ 1.53
CIRBP-225ENST00000589710 MPHOSPH8Q99549 860 aa24.59■■□□□ 1.53
CIRBP-225ENST00000589710 A0A0D9SFI3 127 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 K7ELQ4 463 aaPredicted RBP24.58■■□□□ 1.53
CIRBP-225ENST00000589710 GOLIM4O00461 696 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 ZNF827Q17R98 1081 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 SPEF2Q9C093 1822 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 ST18O60284 1047 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 TRAPPC3LQ5T215 181 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 PAG1Q9NWQ8 432 aa24.58■■□□□ 1.53
CIRBP-225ENST00000589710 ANAPC15P60006 121 aa24.57■■□□□ 1.52
CIRBP-225ENST00000589710 HSP90AA1P07900 732 aaKnown RBP24.56■■□□□ 1.52
CIRBP-225ENST00000589710 HSPA4P34932 840 aa24.56■■□□□ 1.52
CIRBP-225ENST00000589710 IGHMBP2P38935 993 aaKnown RBP24.56■■□□□ 1.52
CIRBP-225ENST00000589710 NBPF5PQ86XG9 351 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-225ENST00000589710 RFX7Q2KHR2 1363 aa24.56■■□□□ 1.52
CIRBP-225ENST00000589710 MROH5Q6ZUA9 1318 aa24.56■■□□□ 1.52
CIRBP-225ENST00000589710 HMGB2P26583 209 aaKnown RBP24.56■■□□□ 1.52
CIRBP-225ENST00000589710 VGLL2Q8N8G2 317 aa24.56■■□□□ 1.52
CIRBP-225ENST00000589710 HELBQ8NG08 1087 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-225ENST00000589710 UPF1Q92900 1129 aaKnown RBP eCLIP24.56■■□□□ 1.52
CIRBP-225ENST00000589710 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
CIRBP-225ENST00000589710 NYXQ9GZU5 481 aa24.56■■□□□ 1.52
CIRBP-225ENST00000589710 PDE8BO95263 885 aa24.55■■□□□ 1.52
CIRBP-225ENST00000589710 PTH1RQ03431 593 aa24.55■■□□□ 1.52
CIRBP-225ENST00000589710 RTL9Q8NET4 1388 aa24.55■■□□□ 1.52
CIRBP-225ENST00000589710 ABCC12Q96J65 1359 aa24.55■■□□□ 1.52
CIRBP-225ENST00000589710 CCDC171Q6TFL3 1326 aa24.54■■□□□ 1.52
CIRBP-225ENST00000589710 COL24A1Q17RW2 1714 aa24.54■■□□□ 1.52
CIRBP-225ENST00000589710 KBTBD3Q8NAB2 608 aa24.54■■□□□ 1.52
CIRBP-225ENST00000589710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.54■■□□□ 1.52
CIRBP-225ENST00000589710 FKBP4Q02790 459 aaKnown RBP eCLIP24.54■■□□□ 1.52
CIRBP-225ENST00000589710 C3orf67Q6ZVT6 689 aa24.54■■□□□ 1.52
CIRBP-225ENST00000589710 ANO8Q9HCE9 1232 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-225ENST00000589710 SNRKQ9NRH2 765 aa24.54■■□□□ 1.52
CIRBP-225ENST00000589710 NPHP1O15259 732 aa24.53■■□□□ 1.52
CIRBP-225ENST00000589710 NEK4P51957 841 aa24.53■■□□□ 1.52
CIRBP-225ENST00000589710 PUM3Q15397 648 aaKnown RBP24.53■■□□□ 1.52
CIRBP-225ENST00000589710 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.53■■□□□ 1.52
CIRBP-225ENST00000589710 ANTXR1Q9H6X2 564 aa24.53■■□□□ 1.52
CIRBP-225ENST00000589710 CASZ1Q86V15 1759 aa24.52■■□□□ 1.52
CIRBP-225ENST00000589710 KCNJ4P48050 445 aa24.52■■□□□ 1.52
CIRBP-225ENST00000589710 CDC5LQ99459 802 aaKnown RBP24.52■■□□□ 1.52
CIRBP-225ENST00000589710 FOXD4L1Q9NU39 408 aa24.52■■□□□ 1.52
CIRBP-225ENST00000589710 MED23Q9ULK4 1368 aa24.52■■□□□ 1.52
CIRBP-225ENST00000589710 ADRA2BP18089 450 aa24.51■■□□□ 1.51
CIRBP-225ENST00000589710 SSFA2P28290 1259 aa24.51■■□□□ 1.51
CIRBP-225ENST00000589710 TFCP2L1Q9NZI6 479 aa24.51■■□□□ 1.51
CIRBP-225ENST00000589710 CHGBP05060 677 aa24.51■■□□□ 1.51
CIRBP-225ENST00000589710 ZNF589Q86UQ0 364 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-225ENST00000589710 TAF5LO75529 589 aa24.5■■□□□ 1.51
CIRBP-225ENST00000589710 PRPF40BQ6NWY9 871 aaKnown RBP24.5■■□□□ 1.51
CIRBP-225ENST00000589710 TPTE2Q6XPS3 522 aa24.5■■□□□ 1.51
CIRBP-225ENST00000589710 CCDC24Q8N4L8 307 aa24.5■■□□□ 1.51
CIRBP-225ENST00000589710 SNX14Q9Y5W7 946 aa24.5■■□□□ 1.51
CIRBP-225ENST00000589710 SCARF1Q14162 830 aa24.49■■□□□ 1.51
CIRBP-225ENST00000589710 LPIN2Q92539 896 aa24.49■■□□□ 1.51
CIRBP-225ENST00000589710 UPF3BQ9BZI7 483 aaKnown RBP24.49■■□□□ 1.51
CIRBP-225ENST00000589710 SLC5A1P13866 664 aa24.49■■□□□ 1.51
CIRBP-225ENST00000589710 SF3B3Q15393 1217 aaKnown RBP24.49■■□□□ 1.51
CIRBP-225ENST00000589710 ANKRD18AQ8IVF6 992 aa24.49■■□□□ 1.51
CIRBP-225ENST00000589710 RBM8AQ9Y5S9 174 aaKnown RBP24.49■■□□□ 1.51
CIRBP-225ENST00000589710 COL4A1P02462 1669 aa24.48■■□□□ 1.51
CIRBP-225ENST00000589710 ARAP2Q8WZ64 1704 aa24.48■■□□□ 1.51
CIRBP-225ENST00000589710 ZAP70P43403 619 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 SLC10A5Q5PT55 438 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 PI16Q6UXB8 463 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 CCDC129Q6ZRS4 1044 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 RASEFQ8IZ41 740 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 IL17RAQ96F46 866 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 NLRP3Q96P20 1036 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 SEC62Q99442 399 aaKnown RBP24.47■■□□□ 1.51
CIRBP-225ENST00000589710 CARMIL3Q8ND23 1372 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 FGFR2P21802 821 aa24.47■■□□□ 1.51
CIRBP-225ENST00000589710 SLC15A2Q16348 729 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms