RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 IGF2BP3O00425 579 aaKnown RBP eCLIP8.22□□□□□ -1.09
VPS25-204ENST00000589577 ECE2O60344 883 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 BBOX1O75936 387 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 ZNF280AP59817 542 aaPredicted RBP8.22□□□□□ -1.09
VPS25-204ENST00000589577 SLC10A5Q5PT55 438 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 TMX4Q9H1E5 349 aaPredicted RBP8.22□□□□□ -1.09
VPS25-204ENST00000589577 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
VPS25-204ENST00000589577 ALPK3Q96L96 1907 aa8.21□□□□□ -1.09
VPS25-204ENST00000589577 OTOFQ9HC10 1997 aa8.21□□□□□ -1.09
VPS25-204ENST00000589577 VIL1P09327 827 aaKnown RBP8.21□□□□□ -1.1
VPS25-204ENST00000589577 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
VPS25-204ENST00000589577 DOK7Q18PE1 504 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 WASHC4Q2M389 1173 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 IFNL1Q8IU54 200 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 POLR3GLQ9BT43 218 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 TMEM106CQ9BVX2 250 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 POLLQ9UGP5 575 aa8.21□□□□□ -1.1
VPS25-204ENST00000589577 WTIPA6NIX2 430 aaPredicted RBP8.2□□□□□ -1.1
VPS25-204ENST00000589577 RIMBP2O15034 1052 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
VPS25-204ENST00000589577 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 GRAPQ13588 217 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 GIGYF2Q6Y7W6 1299 aaKnown RBP8.2□□□□□ -1.1
VPS25-204ENST00000589577 GRAPLQ8TC17 118 aaPredicted RBP8.2□□□□□ -1.1
VPS25-204ENST00000589577 ERO1AQ96HE7 468 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 PHACTR3Q96KR7 559 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 GMLQ99445 158 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 EFCC1Q9HA90 598 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 PTCH2Q9Y6C5 1203 aa8.2□□□□□ -1.1
VPS25-204ENST00000589577 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 SSC5DA1L4H1 1573 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 HCLS1P14317 486 aaPredicted RBP8.19□□□□□ -1.1
VPS25-204ENST00000589577 GPSM2P81274 684 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 CRHR2Q13324 411 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
VPS25-204ENST00000589577 LDLRAD1Q5T700 205 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 KIF6Q6ZMV9 814 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 MCM10Q7L590 875 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 UBE2Q1Q7Z7E8 422 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 FZD1Q9UP38 647 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 CDH23Q9H251 3354 aa8.19□□□□□ -1.1
VPS25-204ENST00000589577 ECM29Q5VYK3 1845 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
VPS25-204ENST00000589577 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
VPS25-204ENST00000589577 SLC4A8Q2Y0W8 1093 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 NBPF9Q3BBW0 867 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 SLC9C1Q4G0N8 1177 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 LRP10Q7Z4F1 713 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 PPP1R42Q7Z4L9 355 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 UTP14AQ9BVJ6 771 aaKnown RBP8.18□□□□□ -1.1
VPS25-204ENST00000589577 MYOZ2Q9NPC6 264 aa8.18□□□□□ -1.1
VPS25-204ENST00000589577 NSFL1CQ9UNZ2 370 aaKnown RBP8.18□□□□□ -1.1
VPS25-204ENST00000589577 A0A1W2PPC1 479 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 MANSC4A6NHS7 340 aaPredicted RBP8.17□□□□□ -1.1
VPS25-204ENST00000589577 MYL6BP14649 208 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 ZEB1P37275 1124 aaPredicted RBP8.17□□□□□ -1.1
VPS25-204ENST00000589577 TCIRG1Q13488 830 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 PRKG1Q13976 671 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 DCTN1Q14203 1278 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
VPS25-204ENST00000589577 DDX46Q7L014 1031 aaKnown RBP8.17□□□□□ -1.1
VPS25-204ENST00000589577 Q7L0L9 218 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 AGBL3Q8NEM8 1001 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 TBC1D16Q8TBP0 767 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 DPF3Q92784 378 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 CELF1Q92879 486 aaKnown RBP8.17□□□□□ -1.1
VPS25-204ENST00000589577 CLMNQ96JQ2 1002 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 STXBP5LQ9Y2K9 1186 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 RRP7AQ9Y3A4 280 aaKnown RBP8.17□□□□□ -1.1
VPS25-204ENST00000589577 ERBB4Q15303 1308 aa8.17□□□□□ -1.1
VPS25-204ENST00000589577 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 ZBTB7BO15156 539 aaPredicted RBP8.16□□□□□ -1.1
VPS25-204ENST00000589577 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 GJA5P36382 358 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 INHBEP58166 350 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 SP3Q02447 781 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 TMC4Q7Z404 712 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 WNK4Q96J92 1243 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 PTPN18Q99952 460 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 MIS18AQ9NYP9 233 aa8.16□□□□□ -1.1
VPS25-204ENST00000589577 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
VPS25-204ENST00000589577 ZBTB48P10074 688 aaPredicted RBP8.15□□□□□ -1.1
VPS25-204ENST00000589577 PRKAR2BP31323 418 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 NBPF11Q86T75 865 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 NLRP10Q86W26 655 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS25-204ENST00000589577 DEFB123Q8N688 67 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 NECTIN2Q92692 538 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 PRDM6Q9NQX0 595 aa8.15□□□□□ -1.1
VPS25-204ENST00000589577 WNT10BO00744 389 aa8.14□□□□□ -1.11
VPS25-204ENST00000589577 PDIA6Q15084 440 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms